RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 WT1-ASQ06250 92 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 CD69Q07108 199 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 TCF15Q12870 199 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 SCGB2A2Q13296 93 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 FNDC4Q9H6D8 234 aaPredicted RBP8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 SAP30LQ9HAJ7 183 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 CTSZQ9UBR2 303 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 MUC21A0A0G2JKD1 596 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 MUC21A0A140T8X8 626 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 UQCRFS1P47985 274 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 MUC21Q5SSG8 566 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 MRPL54Q6P161 138 aaKnown RBP8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 ZNF841Q6ZN19 808 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 GTF2H5Q6ZYL4 71 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 LINC00479Q96M42 142 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 SPTA1P02549 2419 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 HELTA6NFD8 242 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 C9JCJ5 164 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 TNFRSF1AP19438 455 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 SRIP30626 198 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 LGALS4P56470 323 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 RPL8P62917 257 aaKnown RBP8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 MMD2Q8IY49 270 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 OR8I2Q8N0Y5 310 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 OR5AN1Q8NGI8 311 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 OR5B3Q8NH48 314 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 COMMD5Q9GZQ3 224 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 ABCA4P78363 2273 aa8.41□□□□□ -1.06
CLSTN1-203ENST00000435891 PSMB11A5LHX3 300 aa8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 FNDC10F2Z333 226 aa8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 TMEM178BH3BS89 294 aa8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 PRR30Q53SZ7 412 aaPredicted RBP8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 C19orf35Q6ZS72 473 aa8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 NHLRC2Q8NBF2 726 aa8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 SLC25A33Q9BSK2 321 aa8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 IGHV3-72A0A0B4J1Y9 119 aa8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 A0A1B0GV72 72 aa8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 C22orf46C9J442 243 aa8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 SNAI2O43623 268 aa8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 REG1AP05451 166 aa8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 GNG4P50150 75 aa8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 PSG9Q00887 426 aa8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 Q8NA96 180 aa8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 OR1L8Q8NGR8 309 aa8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 OSR1Q8TAX0 266 aaPredicted RBP8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 FLYWCH2Q96CP2 140 aaKnown RBP8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 FAM167A-AS1Q96KT0 104 aa8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 TECRQ9NZ01 308 aaKnown RBP8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 CDC42EP3Q9UKI2 254 aa8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 MRPS16Q9Y3D3 137 aaKnown RBP8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 MALRD1Q5VYJ5 2156 aa8.4□□□□□ -1.06
CLSTN1-203ENST00000435891 PPIAL4EA0A075B759 164 aa8.4□□□□□ -1.07
CLSTN1-203ENST00000435891 PPIAL4DF5H284 164 aa8.4□□□□□ -1.07
CLSTN1-203ENST00000435891 IGLV2-8P01709 118 aa8.4□□□□□ -1.07
CLSTN1-203ENST00000435891 PPIAL4FP0DN26 164 aa8.4□□□□□ -1.07
CLSTN1-203ENST00000435891 PYYP10082 97 aa8.4□□□□□ -1.07
CLSTN1-203ENST00000435891 NBEAP1P0C6P0 100 aa8.39□□□□□ -1.07
CLSTN1-203ENST00000435891 APELAP0DMC3 54 aa8.39□□□□□ -1.07
CLSTN1-203ENST00000435891 RNASEKQ6P5S7 137 aaKnown RBP8.39□□□□□ -1.07
CLSTN1-203ENST00000435891 OR10X1Q8NGY0 326 aa8.39□□□□□ -1.07
CLSTN1-203ENST00000435891 M0R2Z0 102 aa8.39□□□□□ -1.07
CLSTN1-203ENST00000435891 CA1P00915 261 aaPredicted RBP8.39□□□□□ -1.07
CLSTN1-203ENST00000435891 IGLV2-23P01705 113 aa8.39□□□□□ -1.07
CLSTN1-203ENST00000435891 PLP1P60201 277 aa8.39□□□□□ -1.07
CLSTN1-203ENST00000435891 TMEM177Q53S58 311 aa8.39□□□□□ -1.07
CLSTN1-203ENST00000435891 SLC25A2Q9BXI2 301 aa8.39□□□□□ -1.07
CLSTN1-203ENST00000435891 TMEM167BQ9NRX6 74 aa8.39□□□□□ -1.07
CLSTN1-203ENST00000435891 IGLC7A0M8Q6 106 aa8.39□□□□□ -1.07
CLSTN1-203ENST00000435891 PRRG2O14669 202 aa8.39□□□□□ -1.07
CLSTN1-203ENST00000435891 PLAUP00749 431 aa8.39□□□□□ -1.07
CLSTN1-203ENST00000435891 USF1P22415 310 aaPredicted RBP8.39□□□□□ -1.07
CLSTN1-203ENST00000435891 PATE2Q6UY27 113 aa8.39□□□□□ -1.07
CLSTN1-203ENST00000435891 NPIPB3Q92617 1050 aa8.39□□□□□ -1.07
CLSTN1-203ENST00000435891 CLEC7AQ9BXN2 247 aa8.39□□□□□ -1.07
CLSTN1-203ENST00000435891 TNFRSF13BO14836 293 aaPredicted RBP8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 SLC25A17O43808 307 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 LOXP28300 417 aaPredicted RBP8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 CA7P43166 264 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 PAX2Q02962 417 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 MEF2CQ06413 473 aaPredicted RBP8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 FER1L6-AS1Q8NA97 138 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 OR1B1Q8NGR6 318 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 RCHY1Q96PM5 261 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 IGKV1D-37A0A075B6S9 117 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 C8orf88P0DMB2 117 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 IGLL1P15814 213 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 MRGPRG-AS1Q2M3A8 158 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 IGHV2-26A0A0B4J1V2 119 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 DLL1O00548 723 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 ZNF324O75467 553 aaPredicted RBP8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 CTRLP40313 264 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 PMCHL1Q16048 86 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 RPEL1Q2QD12 228 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 LRRC10Q5BKY1 277 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 PRR31Q5SQ13 230 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 OR4C13Q8NGP0 309 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 WFDC12Q8WWY7 111 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 FAM168AQ92567 244 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 LY96Q9Y6Y9 160 aa8.38□□□□□ -1.07
CLSTN1-203ENST00000435891 ERHP84090 104 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms