RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 PBDC1Q9BVG4 233 aa12.95□□□□□ -0.34
NUP50-208ENST00000430547 NDUFA13Q9P0J0 144 aa12.95□□□□□ -0.34
NUP50-208ENST00000430547 PFDN2Q9UHV9 154 aa12.95□□□□□ -0.34
NUP50-208ENST00000430547 CXorf65A6NEN9 183 aa12.94□□□□□ -0.34
NUP50-208ENST00000430547 SYNGR2O43760 224 aa12.94□□□□□ -0.34
NUP50-208ENST00000430547 GAMTQ14353 236 aa12.94□□□□□ -0.34
NUP50-208ENST00000430547 GGNBP1Q5YKI7 109 aa12.94□□□□□ -0.34
NUP50-208ENST00000430547 COQ8AQ8NI60 647 aa12.94□□□□□ -0.34
NUP50-208ENST00000430547 RNF125Q96EQ8 232 aa12.94□□□□□ -0.34
NUP50-208ENST00000430547 MAGT1Q9H0U3 335 aa12.94□□□□□ -0.34
NUP50-208ENST00000430547 U3KQE9 123 aa12.94□□□□□ -0.34
NUP50-208ENST00000430547 C9orf170A2RU37 121 aa12.93□□□□□ -0.34
NUP50-208ENST00000430547 WRBO00258 174 aa12.93□□□□□ -0.34
NUP50-208ENST00000430547 PMS2P11Q13670 270 aa12.93□□□□□ -0.34
NUP50-208ENST00000430547 DCANP1Q8TF63 244 aa12.93□□□□□ -0.34
NUP50-208ENST00000430547 GLMPQ8WWB7 406 aa12.93□□□□□ -0.34
NUP50-208ENST00000430547 RARRES2Q99969 163 aa12.93□□□□□ -0.34
NUP50-208ENST00000430547 C7orf50Q9BRJ6 194 aaKnown RBP12.93□□□□□ -0.34
NUP50-208ENST00000430547 AGRNO00468 2067 aa12.93□□□□□ -0.34
NUP50-208ENST00000430547 DYNC2H1Q8NCM8 4307 aaKnown RBP12.92□□□□□ -0.34
NUP50-208ENST00000430547 IFNA21P01568 189 aa12.92□□□□□ -0.34
NUP50-208ENST00000430547 IL7P13232 177 aa12.92□□□□□ -0.34
NUP50-208ENST00000430547 C4orf46Q504U0 113 aa12.92□□□□□ -0.34
NUP50-208ENST00000430547 SIGLEC15Q6ZMC9 328 aa12.92□□□□□ -0.34
NUP50-208ENST00000430547 FLVCR2Q9UPI3 526 aa12.92□□□□□ -0.34
NUP50-208ENST00000430547 LYSTQ99698 3801 aa12.91□□□□□ -0.34
NUP50-208ENST00000430547 BUB3O43684 328 aa12.91□□□□□ -0.34
NUP50-208ENST00000430547 ADAP1O75689 374 aa12.91□□□□□ -0.34
NUP50-208ENST00000430547 OR4E1P0C645 316 aa12.91□□□□□ -0.34
NUP50-208ENST00000430547 LYZP61626 148 aa12.91□□□□□ -0.34
NUP50-208ENST00000430547 SNRPD3P62318 126 aaKnown RBP12.91□□□□□ -0.34
NUP50-208ENST00000430547 ZNF90Q03938 601 aa12.91□□□□□ -0.34
NUP50-208ENST00000430547 SPANXN5Q5MJ07 72 aa12.91□□□□□ -0.34
NUP50-208ENST00000430547 OR8G2PQ6IF36 304 aa12.91□□□□□ -0.34
NUP50-208ENST00000430547 SDHCQ99643 169 aaPredicted RBP12.91□□□□□ -0.34
NUP50-208ENST00000430547 NRN1Q9NPD7 142 aa12.91□□□□□ -0.34
NUP50-208ENST00000430547 NUPR2A6NF83 97 aa12.9□□□□□ -0.34
NUP50-208ENST00000430547 SNRPGP15A8MWD9 76 aa12.9□□□□□ -0.34
NUP50-208ENST00000430547 ATF4P18848 351 aaPredicted RBP12.9□□□□□ -0.34
NUP50-208ENST00000430547 PSMG4Q5JS54 123 aa12.9□□□□□ -0.34
NUP50-208ENST00000430547 OR11H2Q8NH07 326 aa12.9□□□□□ -0.34
NUP50-208ENST00000430547 PPP1R14BQ96C90 147 aa12.9□□□□□ -0.34
NUP50-208ENST00000430547 TRGV9Q99603 122 aa12.9□□□□□ -0.34
NUP50-208ENST00000430547 STRAPQ9Y3F4 350 aaKnown RBP12.9□□□□□ -0.34
NUP50-208ENST00000430547 IGKV1D-37A0A075B6S9 117 aa12.89□□□□□ -0.35
NUP50-208ENST00000430547 KNCNA6PVL3 124 aa12.89□□□□□ -0.35
NUP50-208ENST00000430547 H3BP45 60 aa12.89□□□□□ -0.35
NUP50-208ENST00000430547 SPP1P10451 314 aa12.89□□□□□ -0.35
NUP50-208ENST00000430547 ANXA7P20073 488 aaKnown RBP12.89□□□□□ -0.35
NUP50-208ENST00000430547 OR2F1Q13607 317 aa12.89□□□□□ -0.35
NUP50-208ENST00000430547 CNPY1Q3B7I2 92 aa12.89□□□□□ -0.35
NUP50-208ENST00000430547 TMEM41BQ5BJD5 291 aa12.89□□□□□ -0.35
NUP50-208ENST00000430547 ACTL10Q5JWF8 245 aa12.89□□□□□ -0.35
NUP50-208ENST00000430547 MORN3Q6PF18 240 aaPredicted RBP12.89□□□□□ -0.35
NUP50-208ENST00000430547 TRPT1Q86TN4 253 aaKnown RBP12.89□□□□□ -0.35
NUP50-208ENST00000430547 FBXL17Q9UF56 701 aa12.89□□□□□ -0.35
NUP50-208ENST00000430547 BTCP35070 178 aa12.88□□□□□ -0.35
NUP50-208ENST00000430547 NKX2-1P43699 371 aaPredicted RBP12.88□□□□□ -0.35
NUP50-208ENST00000430547 EWSR1Q01844 656 aaKnown RBP eCLIP12.88□□□□□ -0.35
NUP50-208ENST00000430547 AKR1C1Q04828 323 aa12.88□□□□□ -0.35
NUP50-208ENST00000430547 SSSCA1O60232 199 aa12.87□□□□□ -0.35
NUP50-208ENST00000430547 CFDP00746 253 aaPredicted RBP12.87□□□□□ -0.35
NUP50-208ENST00000430547 POLR2GP62487 172 aaKnown RBP eCLIP12.87□□□□□ -0.35
NUP50-208ENST00000430547 THAP8Q8NA92 274 aa12.87□□□□□ -0.35
NUP50-208ENST00000430547 SEPSECSQ9HD40 501 aaKnown RBP12.87□□□□□ -0.35
NUP50-208ENST00000430547 PSENENQ9NZ42 101 aa12.87□□□□□ -0.35
NUP50-208ENST00000430547 SMCO3A2RU48 225 aa12.86□□□□□ -0.35
NUP50-208ENST00000430547 LYRM1O43325 122 aa12.86□□□□□ -0.35
NUP50-208ENST00000430547 SCGB1D2O95969 90 aa12.86□□□□□ -0.35
NUP50-208ENST00000430547 ID3Q02535 119 aa12.86□□□□□ -0.35
NUP50-208ENST00000430547 C1orf194Q5T5A4 169 aa12.86□□□□□ -0.35
NUP50-208ENST00000430547 RAB40CQ96S21 281 aa12.86□□□□□ -0.35
NUP50-208ENST00000430547 C20orf85Q9H1P6 137 aa12.86□□□□□ -0.35
NUP50-208ENST00000430547 C11orf68Q9H3H3 251 aaKnown RBP12.86□□□□□ -0.35
NUP50-208ENST00000430547 KLK5Q9Y337 293 aaPredicted RBP12.86□□□□□ -0.35
NUP50-208ENST00000430547 RYR2Q92736 4967 aa12.86□□□□□ -0.35
NUP50-208ENST00000430547 IGKV1OR2-108A0A075B7D4 117 aa12.85□□□□□ -0.35
NUP50-208ENST00000430547 PRSS46E5RG02 174 aa12.85□□□□□ -0.35
NUP50-208ENST00000430547 NUTF2P61970 127 aaKnown RBP12.85□□□□□ -0.35
NUP50-208ENST00000430547 IAH1Q2TAA2 248 aaPredicted RBP12.85□□□□□ -0.35
NUP50-208ENST00000430547 ACOT7LQ6ZUV0 252 aa12.85□□□□□ -0.35
NUP50-208ENST00000430547 OR8I2Q8N0Y5 310 aa12.85□□□□□ -0.35
NUP50-208ENST00000430547 BPIFCQ8NFQ6 507 aa12.85□□□□□ -0.35
NUP50-208ENST00000430547 OR4D5Q8NGN0 318 aa12.85□□□□□ -0.35
NUP50-208ENST00000430547 S100A7P31151 101 aa12.84□□□□□ -0.35
NUP50-208ENST00000430547 ID1P41134 155 aa12.84□□□□□ -0.35
NUP50-208ENST00000430547 CEMP1Q6PRD7 247 aaPredicted RBP12.84□□□□□ -0.35
NUP50-208ENST00000430547 C11orf45Q8TAV5 145 aa12.84□□□□□ -0.35
NUP50-208ENST00000430547 MFFQ9GZY8 342 aa12.84□□□□□ -0.35
NUP50-208ENST00000430547 SACSQ9NZJ4 4579 aa12.84□□□□□ -0.35
NUP50-208ENST00000430547 C4BPBP20851 252 aa12.83□□□□□ -0.36
NUP50-208ENST00000430547 MITD1Q8WV92 249 aa12.83□□□□□ -0.36
NUP50-208ENST00000430547 SMIM8Q96KF7 97 aa12.83□□□□□ -0.36
NUP50-208ENST00000430547 LINC00052Q96N35 136 aa12.83□□□□□ -0.36
NUP50-208ENST00000430547 C1QTNF4Q9BXJ3 329 aa12.83□□□□□ -0.36
NUP50-208ENST00000430547 GSKIPQ9P0R6 139 aa12.83□□□□□ -0.36
NUP50-208ENST00000430547 DEFB4AO15263 64 aa12.82□□□□□ -0.36
NUP50-208ENST00000430547 PLA2G10O15496 165 aa12.82□□□□□ -0.36
NUP50-208ENST00000430547 ORM2P19652 201 aa12.82□□□□□ -0.36
NUP50-208ENST00000430547 PSMB3P49720 205 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms