RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 OR8G2PQ6IF36 304 aa11.02□□□□□ -0.65
CHD1-202ENST00000414220 TRGV9Q99603 122 aa11.02□□□□□ -0.65
CHD1-202ENST00000414220 FAM110AQ9BQ89 295 aa11.02□□□□□ -0.65
CHD1-202ENST00000414220 MGAT4CQ9UBM8 478 aa11.02□□□□□ -0.65
CHD1-202ENST00000414220 LSM5Q9Y4Y9 91 aaKnown RBP11.02□□□□□ -0.65
CHD1-202ENST00000414220 IGKV3-7A0A075B6H7 116 aa11.01□□□□□ -0.65
CHD1-202ENST00000414220 TRAV2A0A0B4J234 112 aa11.01□□□□□ -0.65
CHD1-202ENST00000414220 IGHV3-66A0A0C4DH42 116 aa11.01□□□□□ -0.65
CHD1-202ENST00000414220 SMCO3A2RU48 225 aa11.01□□□□□ -0.65
CHD1-202ENST00000414220 DFFBO76075 338 aa11.01□□□□□ -0.65
CHD1-202ENST00000414220 MBPP02686 304 aaPredicted RBP11.01□□□□□ -0.65
CHD1-202ENST00000414220 P2RY1P47900 373 aa11.01□□□□□ -0.65
CHD1-202ENST00000414220 TFPI2P48307 235 aa11.01□□□□□ -0.65
CHD1-202ENST00000414220 S100A7AQ86SG5 101 aa11.01□□□□□ -0.65
CHD1-202ENST00000414220 RNF125Q96EQ8 232 aa11.01□□□□□ -0.65
CHD1-202ENST00000414220 ZNF414Q96IQ9 312 aa11.01□□□□□ -0.65
CHD1-202ENST00000414220 SPATA25Q9BR10 227 aa11.01□□□□□ -0.65
CHD1-202ENST00000414220 MARVELD1Q9BSK0 173 aa11.01□□□□□ -0.65
CHD1-202ENST00000414220 PBDC1Q9BVG4 233 aa11.01□□□□□ -0.65
CHD1-202ENST00000414220 RCL1Q9Y2P8 373 aaKnown RBP11.01□□□□□ -0.65
CHD1-202ENST00000414220 PRKDCP78527 4128 aaKnown RBP11.01□□□□□ -0.65
CHD1-202ENST00000414220 LOC102724200A0A096LPH7 203 aaPredicted RBP11□□□□□ -0.65
CHD1-202ENST00000414220 APOHP02749 345 aaPredicted RBP11□□□□□ -0.65
CHD1-202ENST00000414220 RLN2P04090 185 aa11□□□□□ -0.65
CHD1-202ENST00000414220 S100A10P60903 97 aa11□□□□□ -0.65
CHD1-202ENST00000414220 DLK1P80370 383 aa11□□□□□ -0.65
CHD1-202ENST00000414220 CYCSP99999 105 aaKnown RBP11□□□□□ -0.65
CHD1-202ENST00000414220 FAM90A2PQ658T7 463 aa11□□□□□ -0.65
CHD1-202ENST00000414220 TMEM14EPQ6UXP3 125 aa11□□□□□ -0.65
CHD1-202ENST00000414220 ACOT7LQ6ZUV0 252 aa11□□□□□ -0.65
CHD1-202ENST00000414220 WFDC3Q8IUB2 231 aa11□□□□□ -0.65
CHD1-202ENST00000414220 GBGT1Q8N5D6 347 aa11□□□□□ -0.65
CHD1-202ENST00000414220 THAP8Q8NA92 274 aa11□□□□□ -0.65
CHD1-202ENST00000414220 BPIFCQ8NFQ6 507 aa11□□□□□ -0.65
CHD1-202ENST00000414220 PPP1R14BQ96C90 147 aa11□□□□□ -0.65
CHD1-202ENST00000414220 GGACTQ9BVM4 153 aa11□□□□□ -0.65
CHD1-202ENST00000414220 NPVFQ9HCQ7 196 aa11□□□□□ -0.65
CHD1-202ENST00000414220 C7orf66A4D0T2 115 aa10.99□□□□□ -0.65
CHD1-202ENST00000414220 FNDC10F2Z333 226 aa10.99□□□□□ -0.65
CHD1-202ENST00000414220 K7EPK0 472 aa10.99□□□□□ -0.65
CHD1-202ENST00000414220 SSNA1O43805 119 aa10.99□□□□□ -0.65
CHD1-202ENST00000414220 METTL15P1P0C7V9 234 aa10.99□□□□□ -0.65
CHD1-202ENST00000414220 CAV2P51636 162 aa10.99□□□□□ -0.65
CHD1-202ENST00000414220 PAX9P55771 341 aa10.99□□□□□ -0.65
CHD1-202ENST00000414220 LYZP61626 148 aa10.99□□□□□ -0.65
CHD1-202ENST00000414220 ZNF90Q03938 601 aa10.99□□□□□ -0.65
CHD1-202ENST00000414220 HAGHQ16775 308 aa10.99□□□□□ -0.65
CHD1-202ENST00000414220 TMEM144Q7Z5S9 345 aa10.99□□□□□ -0.65
CHD1-202ENST00000414220 STXBP6Q8NFX7 210 aa10.99□□□□□ -0.65
CHD1-202ENST00000414220 GGTLC1Q9BX51 225 aa10.99□□□□□ -0.65
CHD1-202ENST00000414220 MS4A6AQ9H2W1 248 aa10.99□□□□□ -0.65
CHD1-202ENST00000414220 FBXL17Q9UF56 701 aa10.99□□□□□ -0.65
CHD1-202ENST00000414220 UBQLN2Q9UHD9 624 aa10.99□□□□□ -0.65
CHD1-202ENST00000414220 U3KQE9 123 aa10.99□□□□□ -0.65
CHD1-202ENST00000414220 PRSS46E5RG02 174 aa10.98□□□□□ -0.65
CHD1-202ENST00000414220 GOSR2O14653 212 aa10.98□□□□□ -0.65
CHD1-202ENST00000414220 APOC4P55056 127 aa10.98□□□□□ -0.65
CHD1-202ENST00000414220 OR2F1Q13607 317 aa10.98□□□□□ -0.65
CHD1-202ENST00000414220 USF2Q15853 346 aaPredicted RBP10.98□□□□□ -0.65
CHD1-202ENST00000414220 C16orf54Q6UWD8 224 aa10.98□□□□□ -0.65
CHD1-202ENST00000414220 WWC2-AS2Q96NR7 200 aa10.98□□□□□ -0.65
CHD1-202ENST00000414220 RCHY1Q96PM5 261 aa10.98□□□□□ -0.65
CHD1-202ENST00000414220 TM2D3Q9BRN9 247 aa10.98□□□□□ -0.65
CHD1-202ENST00000414220 TGP01266 2768 aa10.97□□□□□ -0.65
CHD1-202ENST00000414220 IGKV1D-37A0A075B6S9 117 aa10.97□□□□□ -0.65
CHD1-202ENST00000414220 PTTG1O95997 202 aa10.97□□□□□ -0.65
CHD1-202ENST00000414220 RRAS2P62070 204 aaPredicted RBP10.97□□□□□ -0.65
CHD1-202ENST00000414220 SELENOTP62341 195 aa10.97□□□□□ -0.65
CHD1-202ENST00000414220 RAB31Q13636 194 aa10.97□□□□□ -0.65
CHD1-202ENST00000414220 LINC00322Q6ZN03 302 aaPredicted RBP10.97□□□□□ -0.65
CHD1-202ENST00000414220 STX12Q86Y82 276 aa10.97□□□□□ -0.65
CHD1-202ENST00000414220 WFDC10AQ9H1F0 79 aa10.97□□□□□ -0.65
CHD1-202ENST00000414220 SLC45A2Q9UMX9 530 aa10.97□□□□□ -0.65
CHD1-202ENST00000414220 RNF24Q9Y225 148 aa10.97□□□□□ -0.65
CHD1-202ENST00000414220 RBMY1BA6NDE4 496 aaKnown RBP10.96□□□□□ -0.65
CHD1-202ENST00000414220 RBMY1EA6NEQ0 496 aaKnown RBP10.96□□□□□ -0.65
CHD1-202ENST00000414220 PMS2P5A8MQ11 134 aa10.96□□□□□ -0.65
CHD1-202ENST00000414220 BUB3O43684 328 aa10.96□□□□□ -0.65
CHD1-202ENST00000414220 DEDDO75618 318 aa10.96□□□□□ -0.65
CHD1-202ENST00000414220 RBMY1DP0C7P1 496 aaKnown RBP10.96□□□□□ -0.65
CHD1-202ENST00000414220 HBG1P69891 147 aa10.96□□□□□ -0.65
CHD1-202ENST00000414220 HBG2P69892 147 aa10.96□□□□□ -0.65
CHD1-202ENST00000414220 RAB32Q13637 225 aa10.96□□□□□ -0.65
CHD1-202ENST00000414220 C1orf194Q5T5A4 169 aa10.96□□□□□ -0.65
CHD1-202ENST00000414220 TEPPQ6URK8 271 aa10.96□□□□□ -0.65
CHD1-202ENST00000414220 SIGLEC15Q6ZMC9 328 aa10.96□□□□□ -0.65
CHD1-202ENST00000414220 LILRB2Q8N423 598 aa10.96□□□□□ -0.65
CHD1-202ENST00000414220 TMEM147Q9BVK8 224 aa10.96□□□□□ -0.65
CHD1-202ENST00000414220 NMES1Q9C002 83 aa10.96□□□□□ -0.65
CHD1-202ENST00000414220 IGKV1OR2-108A0A075B7D4 117 aa10.95□□□□□ -0.66
CHD1-202ENST00000414220 UBE2CO00762 179 aa10.95□□□□□ -0.66
CHD1-202ENST00000414220 ORM2P19652 201 aa10.95□□□□□ -0.66
CHD1-202ENST00000414220 S100A11P31949 105 aa10.95□□□□□ -0.66
CHD1-202ENST00000414220 RAP2BP61225 183 aa10.95□□□□□ -0.66
CHD1-202ENST00000414220 ODF3L2Q3SX64 289 aa10.95□□□□□ -0.66
CHD1-202ENST00000414220 CYP2G1PQ6ZSU1 146 aa10.95□□□□□ -0.66
CHD1-202ENST00000414220 STPG3Q8N7X2 389 aa10.95□□□□□ -0.66
CHD1-202ENST00000414220 GLMPQ8WWB7 406 aa10.95□□□□□ -0.66
CHD1-202ENST00000414220 SLC25A31Q9H0C2 315 aa10.95□□□□□ -0.66
CHD1-202ENST00000414220 LYRM2Q9NU23 88 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms