RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 LCA10Q71F78 164 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 C9orf163Q8N9P6 203 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 OR4E2Q8NGC2 313 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 GPR146Q96CH1 333 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 MAP1LC3BQ9GZQ8 125 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 COL11A1P12107 1806 aaPredicted RBP1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 GLI3P10071 1580 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 UBR2Q8IWV8 1755 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 SMARCA4P51532 1647 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 A0A1W2PRE2 83 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 CYB5BO43169 146 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 NDUFA2O43678 99 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 FKBP2P26885 142 aaKnown RBP1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 SRIP30626 198 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 PHBP35232 272 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 GLRXP35754 106 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 PIGPP57054 158 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 GNG5P63218 68 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 TMEM128Q5BJH2 165 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 AKR1C8PQ5T2L2 129 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 LYRM7Q5U5X0 104 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 OR8D4Q8NGM9 314 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 SKA2Q8WVK7 121 aaPredicted RBP1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 TCEAL4Q96EI5 215 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 RMND5BQ96G75 393 aaPredicted RBP1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 GPER1Q99527 375 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 YIPF3Q9GZM5 350 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 ACER3Q9NUN7 267 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 LHFPL6Q9Y693 200 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 PCDH15Q96QU1 1955 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 A0A087X0T9 212 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 TRAV4A0A0B4J268 109 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 TMEM212A6NML5 194 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 G3V2T6 193 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 J3QRK9 145 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 TCL1BO95988 128 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 ATP5G3P48201 142 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 NCALDP61601 193 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 RHEBQ15382 184 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 BRMS1LQ5PSV4 323 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 SAMD13Q5VXD3 122 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 DCUN1D2Q6PH85 259 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 Q6ZQT0 140 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 LINC00471Q8N535 108 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 ST6GALNAC3Q8NDV1 305 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 GRPEL2Q8TAA5 225 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 WFDC5Q8TCV5 224 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 Q96M85 177 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 LYSMD1Q96S90 227 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 CGREF1Q99674 301 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 SPANXA1Q9NS26 97 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 MED29Q9NX70 200 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 GSKIPQ9P0R6 139 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 RIC1Q4ADV7 1423 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 MYH7BA7E2Y1 1941 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 DENND4CQ5VZ89 1909 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 CCDC88CQ9P219 2028 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 ADGBQ8N7X0 1667 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 ERCC6Q03468 1493 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 RFX7Q2KHR2 1363 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 TONSLQ96HA7 1378 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 H7C1C5 153 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 OR10J4P0C629 311 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 SRP9P49458 86 aaKnown RBP1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 GTF2A1P52655 376 aaPredicted RBP1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 LCN6P62502 163 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 Q1T7F1 81 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 CCDC153Q494R4 210 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 FP248Q71RG6 208 aaPredicted RBP1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 EXOC3-AS1Q8N2X6 119 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 PLEKHB2Q96CS7 222 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 SERPINI1Q99574 410 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 JPT1Q9UK76 154 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 SSR3Q9UNL2 185 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 STRCQ7RTU9 1775 aa1.9□□□□□ -2.1
HMGB3P31-201ENST00000413333 BICRAQ9NZM4 1560 aa1.9□□□□□ -2.1
HMGB3P31-201ENST00000413333 TRBV19A0A075B6N1 114 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 E7EQ34 232 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 CST8O60676 142 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 NDUFC2O95298 119 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 IFNA7P01567 189 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 CSN2P05814 226 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 CTSDP07339 412 aaPredicted RBP1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 ZNF705BP0CI00 300 aaPredicted RBP1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 COX6A1P12074 109 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 DEFB128Q7Z7B8 93 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 FAM24BQ8N5W8 94 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 OR4D11Q8NGI4 311 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 AQP3Q92482 292 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 HIST1H2BLQ99880 126 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 EFCAB11Q9BUY7 163 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 PBDC1Q9BVG4 233 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 PBOV1Q9GZY1 135 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 TMEM138Q9NPI0 162 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 RASL12Q9NYN1 266 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 CD109Q6YHK3 1445 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 NUP210LQ5VU65 1888 aa1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 A0A087WX48 190 aa1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 TRBV6-5A0A0K0K1A5 114 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms