RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 LCA10Q71F78 164 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 C9orf163Q8N9P6 203 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 OR4E2Q8NGC2 313 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 GPR146Q96CH1 333 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 MAP1LC3BQ9GZQ8 125 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 COL11A1P12107 1806 aaPredicted RBP1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 GLI3P10071 1580 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 UBR2Q8IWV8 1755 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 SMARCA4P51532 1647 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 A0A1W2PRE2 83 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 CYB5BO43169 146 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 NDUFA2O43678 99 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 FKBP2P26885 142 aaKnown RBP1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 SRIP30626 198 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 PHBP35232 272 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 GLRXP35754 106 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 PIGPP57054 158 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 GNG5P63218 68 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 TMEM128Q5BJH2 165 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 AKR1C8PQ5T2L2 129 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 LYRM7Q5U5X0 104 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 OR8D4Q8NGM9 314 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 SKA2Q8WVK7 121 aaPredicted RBP1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 TCEAL4Q96EI5 215 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 RMND5BQ96G75 393 aaPredicted RBP1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 GPER1Q99527 375 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 YIPF3Q9GZM5 350 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 ACER3Q9NUN7 267 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 LHFPL6Q9Y693 200 aa1.93□□□□□ -2.1
HMGB3P31-201ENST00000413333 PCDH15Q96QU1 1955 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 A0A087X0T9 212 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 TRAV4A0A0B4J268 109 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 TMEM212A6NML5 194 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 G3V2T6 193 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 J3QRK9 145 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 TCL1BO95988 128 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 ATP5G3P48201 142 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 NCALDP61601 193 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 RHEBQ15382 184 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 BRMS1LQ5PSV4 323 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 SAMD13Q5VXD3 122 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 DCUN1D2Q6PH85 259 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 Q6ZQT0 140 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 LINC00471Q8N535 108 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 ST6GALNAC3Q8NDV1 305 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 GRPEL2Q8TAA5 225 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 WFDC5Q8TCV5 224 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 Q96M85 177 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 LYSMD1Q96S90 227 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 CGREF1Q99674 301 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 SPANXA1Q9NS26 97 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 MED29Q9NX70 200 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 GSKIPQ9P0R6 139 aa1.92□□□□□ -2.1
HMGB3P31-201ENST00000413333 RIC1Q4ADV7 1423 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 MYH7BA7E2Y1 1941 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 DENND4CQ5VZ89 1909 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 CCDC88CQ9P219 2028 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 ADGBQ8N7X0 1667 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 ERCC6Q03468 1493 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 RFX7Q2KHR2 1363 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 TONSLQ96HA7 1378 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 H7C1C5 153 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 OR10J4P0C629 311 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 SRP9P49458 86 aaKnown RBP1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 GTF2A1P52655 376 aaPredicted RBP1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 LCN6P62502 163 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 Q1T7F1 81 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 CCDC153Q494R4 210 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 FP248Q71RG6 208 aaPredicted RBP1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 EXOC3-AS1Q8N2X6 119 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 PLEKHB2Q96CS7 222 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 SERPINI1Q99574 410 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 JPT1Q9UK76 154 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 SSR3Q9UNL2 185 aa1.91□□□□□ -2.1
HMGB3P31-201ENST00000413333 STRCQ7RTU9 1775 aa1.9□□□□□ -2.1
HMGB3P31-201ENST00000413333 BICRAQ9NZM4 1560 aa1.9□□□□□ -2.1
HMGB3P31-201ENST00000413333 TRBV19A0A075B6N1 114 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 E7EQ34 232 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 CST8O60676 142 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 NDUFC2O95298 119 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 IFNA7P01567 189 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 CSN2P05814 226 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 CTSDP07339 412 aaPredicted RBP1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 ZNF705BP0CI00 300 aaPredicted RBP1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 COX6A1P12074 109 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 DEFB128Q7Z7B8 93 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 FAM24BQ8N5W8 94 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 OR4D11Q8NGI4 311 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 AQP3Q92482 292 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 HIST1H2BLQ99880 126 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 EFCAB11Q9BUY7 163 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 PBDC1Q9BVG4 233 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 PBOV1Q9GZY1 135 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 TMEM138Q9NPI0 162 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 RASL12Q9NYN1 266 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 CD109Q6YHK3 1445 aa1.9□□□□□ -2.11
HMGB3P31-201ENST00000413333 NUP210LQ5VU65 1888 aa1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 A0A087WX48 190 aa1.89□□□□□ -2.11
HMGB3P31-201ENST00000413333 TRBV6-5A0A0K0K1A5 114 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms