RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 HYDINQ4G0P3 5121 aa12.99□□□□□ -0.33
LSM5-204ENST00000409909 BUB3O43684 328 aa12.98□□□□□ -0.33
LSM5-204ENST00000409909 SYNGR2O43760 224 aa12.98□□□□□ -0.33
LSM5-204ENST00000409909 MED6O75586 246 aa12.98□□□□□ -0.33
LSM5-204ENST00000409909 IL7P13232 177 aa12.98□□□□□ -0.33
LSM5-204ENST00000409909 NDUFA13Q9P0J0 144 aa12.98□□□□□ -0.33
LSM5-204ENST00000409909 HELTA6NFD8 242 aa12.97□□□□□ -0.33
LSM5-204ENST00000409909 ZFP92A6NM28 416 aa12.97□□□□□ -0.33
LSM5-204ENST00000409909 WRBO00258 174 aa12.97□□□□□ -0.33
LSM5-204ENST00000409909 OR4E1P0C645 316 aa12.97□□□□□ -0.33
LSM5-204ENST00000409909 ZNF688P0C7X2 276 aa12.97□□□□□ -0.33
LSM5-204ENST00000409909 ANXA7P20073 488 aaKnown RBP12.97□□□□□ -0.33
LSM5-204ENST00000409909 RAB11AP62491 216 aa12.97□□□□□ -0.33
LSM5-204ENST00000409909 DHRS2Q13268 280 aa12.97□□□□□ -0.33
LSM5-204ENST00000409909 RNF125Q96EQ8 232 aa12.97□□□□□ -0.33
LSM5-204ENST00000409909 SLC35E1Q96K37 410 aa12.97□□□□□ -0.33
LSM5-204ENST00000409909 CIB3Q96Q77 187 aaPredicted RBP12.97□□□□□ -0.33
LSM5-204ENST00000409909 PAIP2BQ9ULR5 123 aaKnown RBP12.97□□□□□ -0.33
LSM5-204ENST00000409909 IGKV1OR2-108A0A075B7D4 117 aa12.96□□□□□ -0.33
LSM5-204ENST00000409909 PRSS46E5RG02 174 aa12.96□□□□□ -0.33
LSM5-204ENST00000409909 PLA2G10O15496 165 aa12.96□□□□□ -0.33
LSM5-204ENST00000409909 GATAD1Q8WUU5 269 aa12.96□□□□□ -0.33
LSM5-204ENST00000409909 KNCNA6PVL3 124 aa12.95□□□□□ -0.34
LSM5-204ENST00000409909 CENPXA8MT69 81 aa12.95□□□□□ -0.34
LSM5-204ENST00000409909 CA1P00915 261 aaPredicted RBP12.95□□□□□ -0.34
LSM5-204ENST00000409909 GIG44P09565 113 aaPredicted RBP12.95□□□□□ -0.34
LSM5-204ENST00000409909 EIF2B2P49770 351 aaKnown RBP12.95□□□□□ -0.34
LSM5-204ENST00000409909 AP2S1P53680 142 aaPredicted RBP12.95□□□□□ -0.34
LSM5-204ENST00000409909 ID3Q02535 119 aa12.95□□□□□ -0.34
LSM5-204ENST00000409909 TRPT1Q86TN4 253 aaKnown RBP12.95□□□□□ -0.34
LSM5-204ENST00000409909 STHQ8IWL8 128 aa12.95□□□□□ -0.34
LSM5-204ENST00000409909 C7orf50Q9BRJ6 194 aaKnown RBP12.95□□□□□ -0.34
LSM5-204ENST00000409909 PBDC1Q9BVG4 233 aa12.95□□□□□ -0.34
LSM5-204ENST00000409909 OR2F1Q13607 317 aa12.94□□□□□ -0.34
LSM5-204ENST00000409909 C4orf46Q504U0 113 aa12.94□□□□□ -0.34
LSM5-204ENST00000409909 SPANXN5Q5MJ07 72 aa12.94□□□□□ -0.34
LSM5-204ENST00000409909 SIGLEC15Q6ZMC9 328 aa12.94□□□□□ -0.34
LSM5-204ENST00000409909 THAP8Q8NA92 274 aa12.94□□□□□ -0.34
LSM5-204ENST00000409909 COQ8AQ8NI60 647 aa12.94□□□□□ -0.34
LSM5-204ENST00000409909 TRGV9Q99603 122 aa12.94□□□□□ -0.34
LSM5-204ENST00000409909 RARRES2Q99969 163 aa12.94□□□□□ -0.34
LSM5-204ENST00000409909 ALMS1Q8TCU4 4167 aa12.94□□□□□ -0.34
LSM5-204ENST00000409909 H3BP45 60 aa12.93□□□□□ -0.34
LSM5-204ENST00000409909 ATF4P18848 351 aaPredicted RBP12.93□□□□□ -0.34
LSM5-204ENST00000409909 POLR2GP62487 172 aaKnown RBP eCLIP12.93□□□□□ -0.34
LSM5-204ENST00000409909 RPP30P78346 268 aaKnown RBP12.93□□□□□ -0.34
LSM5-204ENST00000409909 PMS2P11Q13670 270 aa12.93□□□□□ -0.34
LSM5-204ENST00000409909 PSMG4Q5JS54 123 aa12.93□□□□□ -0.34
LSM5-204ENST00000409909 ACTL10Q5JWF8 245 aa12.93□□□□□ -0.34
LSM5-204ENST00000409909 OR8G2PQ6IF36 304 aa12.93□□□□□ -0.34
LSM5-204ENST00000409909 OR4D5Q8NGN0 318 aa12.93□□□□□ -0.34
LSM5-204ENST00000409909 OR11H2Q8NH07 326 aa12.93□□□□□ -0.34
LSM5-204ENST00000409909 RAB40CQ96S21 281 aa12.93□□□□□ -0.34
LSM5-204ENST00000409909 NRN1Q9NPD7 142 aa12.93□□□□□ -0.34
LSM5-204ENST00000409909 CXorf65A6NEN9 183 aa12.92□□□□□ -0.34
LSM5-204ENST00000409909 SNRPGP15A8MWD9 76 aa12.92□□□□□ -0.34
LSM5-204ENST00000409909 LYZP61626 148 aa12.92□□□□□ -0.34
LSM5-204ENST00000409909 STRAPQ9Y3F4 350 aaKnown RBP12.92□□□□□ -0.34
LSM5-204ENST00000409909 LYRM1O43325 122 aa12.91□□□□□ -0.34
LSM5-204ENST00000409909 IFNA21P01568 189 aa12.91□□□□□ -0.34
LSM5-204ENST00000409909 FABP1P07148 127 aa12.91□□□□□ -0.34
LSM5-204ENST00000409909 NKX2-1P43699 371 aaPredicted RBP12.91□□□□□ -0.34
LSM5-204ENST00000409909 MITD1Q8WV92 249 aa12.91□□□□□ -0.34
LSM5-204ENST00000409909 C4BPBP20851 252 aa12.9□□□□□ -0.34
LSM5-204ENST00000409909 NUP62P37198 522 aaPredicted RBP12.9□□□□□ -0.34
LSM5-204ENST00000409909 PAX9P55771 341 aa12.9□□□□□ -0.34
LSM5-204ENST00000409909 CNPY1Q3B7I2 92 aa12.9□□□□□ -0.34
LSM5-204ENST00000409909 GSG1LQ6UXU4 331 aa12.9□□□□□ -0.34
LSM5-204ENST00000409909 TMEM182Q6ZP80 229 aaPredicted RBP12.9□□□□□ -0.34
LSM5-204ENST00000409909 TMEM217Q8N7C4 229 aa12.9□□□□□ -0.34
LSM5-204ENST00000409909 WDR12Q9GZL7 423 aaKnown RBP12.9□□□□□ -0.34
LSM5-204ENST00000409909 C20orf85Q9H1P6 137 aa12.9□□□□□ -0.34
LSM5-204ENST00000409909 SEPSECSQ9HD40 501 aaKnown RBP12.9□□□□□ -0.34
LSM5-204ENST00000409909 PSENENQ9NZ42 101 aa12.9□□□□□ -0.34
LSM5-204ENST00000409909 PMS2P5A8MQ11 134 aa12.89□□□□□ -0.35
LSM5-204ENST00000409909 SSSCA1O60232 199 aa12.89□□□□□ -0.35
LSM5-204ENST00000409909 JTBO76095 146 aa12.89□□□□□ -0.35
LSM5-204ENST00000409909 SPP1P10451 314 aa12.89□□□□□ -0.35
LSM5-204ENST00000409909 GATA2P23769 480 aaPredicted RBP12.89□□□□□ -0.35
LSM5-204ENST00000409909 SNRPD3P62318 126 aaKnown RBP12.89□□□□□ -0.35
LSM5-204ENST00000409909 C1orf194Q5T5A4 169 aa12.89□□□□□ -0.35
LSM5-204ENST00000409909 MORN3Q6PF18 240 aaPredicted RBP12.89□□□□□ -0.35
LSM5-204ENST00000409909 ACOT7LQ6ZUV0 252 aa12.89□□□□□ -0.35
LSM5-204ENST00000409909 SMIM8Q96KF7 97 aa12.89□□□□□ -0.35
LSM5-204ENST00000409909 PFDN2Q9UHV9 154 aa12.89□□□□□ -0.35
LSM5-204ENST00000409909 DEFB4AO15263 64 aa12.88□□□□□ -0.35
LSM5-204ENST00000409909 CCNKO75909 580 aa12.88□□□□□ -0.35
LSM5-204ENST00000409909 TCRBP04435 133 aa12.88□□□□□ -0.35
LSM5-204ENST00000409909 IAH1Q2TAA2 248 aaPredicted RBP12.88□□□□□ -0.35
LSM5-204ENST00000409909 CEMP1Q6PRD7 247 aaPredicted RBP12.88□□□□□ -0.35
LSM5-204ENST00000409909 ZBTB8BQ8NAP8 495 aaPredicted RBP12.88□□□□□ -0.35
LSM5-204ENST00000409909 C11orf68Q9H3H3 251 aaKnown RBP12.88□□□□□ -0.35
LSM5-204ENST00000409909 TRAV6A0A075B6T7 132 aa12.87□□□□□ -0.35
LSM5-204ENST00000409909 NUPR2A6NF83 97 aa12.87□□□□□ -0.35
LSM5-204ENST00000409909 SOCS3O14543 225 aa12.87□□□□□ -0.35
LSM5-204ENST00000409909 DEFB1P60022 68 aa12.87□□□□□ -0.35
LSM5-204ENST00000409909 AKR1C1Q04828 323 aa12.87□□□□□ -0.35
LSM5-204ENST00000409909 CSNK1G2-AS1Q8NCQ2 148 aa12.87□□□□□ -0.35
LSM5-204ENST00000409909 CLEC5AQ9NY25 188 aa12.87□□□□□ -0.35
LSM5-204ENST00000409909 GSKIPQ9P0R6 139 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms