RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 NPIPB3Q92617 1050 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 YPEL2Q96QA6 119 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 ZNF581Q9P0T4 197 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 RAXQ9Y2V3 346 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 DYSFO75923 2080 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 TRAV8-4A0A0B4J246 113 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 IGKV1-5P01602 117 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 PAX9P55771 341 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 GNG5P63218 68 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 SSBP2P81877 361 aaPredicted RBP4.86□□□□□ -1.63
HDAC9-203ENST00000406072 SPANXN1Q5VSR9 72 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 RND1Q92730 232 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 HARBI1Q96MB7 349 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 VKORC1Q9BQB6 163 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 TNRC6AQ8NDV7 1962 aaKnown RBP4.86□□□□□ -1.63
HDAC9-203ENST00000406072 FOXH1O75593 365 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 TNFRSF6BO95407 300 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 TMEM155Q4W5P6 130 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 EBLN2Q6P2I7 272 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 RASL11AQ6T310 242 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 TREML4Q6UXN2 200 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 ATP5L2Q7Z4Y8 100 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 LYZL4Q96KX0 146 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 GGTLC1Q9BX51 225 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 LIME1Q9H400 295 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 PGPEP1Q9NXJ5 209 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 LY96Q9Y6Y9 160 aa4.86□□□□□ -1.63
HDAC9-203ENST00000406072 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.85□□□□□ -1.63
HDAC9-203ENST00000406072 ZGRF1Q86YA3 2104 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 TRBV20OR9-2A0A075B6H5 130 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 NPIPB13A6NJU9 1138 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 NPIPB4C9JG80 1138 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 ATP5LO75964 103 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 DPM2O94777 84 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 REG1AP05451 166 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 MEOX1P50221 254 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 SPACA3Q8IXA5 215 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 CHAC1Q9BUX1 264 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 MRPL32Q9BYC8 188 aaKnown RBP4.85□□□□□ -1.63
HDAC9-203ENST00000406072 DKK4Q9UBT3 224 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 PTPRBP23467 1997 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 TRIOBPQ9H2D6 2365 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 IGKV1-12A0A0C4DH73 117 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 IGKV1D-12P01611 117 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 LEPP41159 167 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 ATP5G2Q06055 141 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 WFDC2Q14508 124 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 TMEM178AQ8NBL3 297 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 HIGD1AQ9Y241 93 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 KLF12Q9Y4X4 402 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 PCSK5Q92824 1860 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 IGKCP01834 107 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 PYYP10082 97 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 CD24P25063 80 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 FCGR2BP31994 310 aaPredicted RBP4.85□□□□□ -1.63
HDAC9-203ENST00000406072 SRSF7Q16629 238 aaKnown RBP eCLIP4.85□□□□□ -1.63
HDAC9-203ENST00000406072 MEIG1Q5JSS6 88 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 LINC00305Q7Z4B0 112 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 YPEL4Q96NS1 127 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 RASL11BQ9BPW5 248 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 SCRT1Q9BWW7 348 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 YAE1D1Q9NRH1 226 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 SPANXA1Q9NS26 97 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 MSRB2Q9Y3D2 182 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 ZNF407Q9C0G0 2248 aa4.85□□□□□ -1.63
HDAC9-203ENST00000406072 DOCK7Q96N67 2140 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 IGHV1-45A0A0A0MS14 117 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 A0A0J9YW62 118 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 K7ERJ3 54 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 IGHV4-39P01824 125 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 MGPP08493 103 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 IFITM1P13164 125 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 AREGP15514 252 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 CCL1P22362 96 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 EVI2AP22794 236 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 LOXL3P58215 753 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 ADIPOQQ15848 244 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 C9orf153Q5TBE3 101 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 ZC2HC1BQ5TFG8 222 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 HCP5Q6MZN7 132 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 RAB1CQ92928 201 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 IMMP1LQ96LU5 166 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 LINC00479Q96M42 142 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 C5orf63A6NC05 138 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 AHRRA9YTQ3 701 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 PATE3B3GLJ2 98 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 F2RL2O00254 374 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 DLL1O00548 723 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 LGALS3P17931 250 aaKnown RBP4.84□□□□□ -1.63
HDAC9-203ENST00000406072 PPDPFLQ8WWR9 84 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 FSCN3Q9NQT6 498 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 EPDR1Q9UM22 224 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 RNF115Q9Y4L5 304 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 V9GYV3 84 aa4.84□□□□□ -1.63
HDAC9-203ENST00000406072 SPTAN1Q13813 2472 aaKnown RBP4.84□□□□□ -1.64
HDAC9-203ENST00000406072 SRSF6Q13247 344 aaKnown RBP4.84□□□□□ -1.64
HDAC9-203ENST00000406072 PCOLCEQ15113 449 aa4.84□□□□□ -1.64
HDAC9-203ENST00000406072 RNPS1Q15287 305 aaKnown RBP4.84□□□□□ -1.64
HDAC9-203ENST00000406072 KLF17Q5JT82 389 aaPredicted RBP4.84□□□□□ -1.64
HDAC9-203ENST00000406072 TMEM170BQ5T4T1 132 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms