RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 CRYGSP22914 178 aa12.43□□□□□ -0.42
CHL1-202ENST00000397491 C18orf32Q8TCD1 76 aa12.43□□□□□ -0.42
CHL1-202ENST00000397491 PRDM6Q9NQX0 595 aa12.43□□□□□ -0.42
CHL1-202ENST00000397491 CECR9P0C854 216 aa12.43□□□□□ -0.42
CHL1-202ENST00000397491 ZC2HC1BQ5TFG8 222 aa12.43□□□□□ -0.42
CHL1-202ENST00000397491 C5orf63A6NC05 138 aa12.43□□□□□ -0.42
CHL1-202ENST00000397491 CELA3BP08861 270 aa12.43□□□□□ -0.42
CHL1-202ENST00000397491 PLNP26678 52 aa12.43□□□□□ -0.42
CHL1-202ENST00000397491 NYNRINQ9P2P1 1898 aaKnown RBP12.43□□□□□ -0.42
CHL1-202ENST00000397491 NTF4P34130 210 aa12.43□□□□□ -0.42
CHL1-202ENST00000397491 Q6ZRM9 215 aa12.43□□□□□ -0.42
CHL1-202ENST00000397491 RNF182Q8N6D2 247 aa12.43□□□□□ -0.42
CHL1-202ENST00000397491 RNF125Q96EQ8 232 aa12.43□□□□□ -0.42
CHL1-202ENST00000397491 PSME4Q14997 1843 aa12.42□□□□□ -0.42
CHL1-202ENST00000397491 ABCA1O95477 2261 aa12.42□□□□□ -0.42
CHL1-202ENST00000397491 LAGE3Q14657 143 aa12.42□□□□□ -0.42
CHL1-202ENST00000397491 LINC01559Q495D7 138 aa12.42□□□□□ -0.42
CHL1-202ENST00000397491 C9orf118A6NHY6 69 aa12.42□□□□□ -0.42
CHL1-202ENST00000397491 NPIPB5A8MRT5 1133 aa12.42□□□□□ -0.42
CHL1-202ENST00000397491 IQCF6A8MYZ5 107 aa12.42□□□□□ -0.42
CHL1-202ENST00000397491 CACNA1BQ00975 2339 aa12.42□□□□□ -0.42
CHL1-202ENST00000397491 ATXN8Q156A1 80 aa12.42□□□□□ -0.42
CHL1-202ENST00000397491 FAM106AQ4KMX7 169 aa12.42□□□□□ -0.42
CHL1-202ENST00000397491 ARHGEF17Q96PE2 2063 aaPredicted RBP12.42□□□□□ -0.42
CHL1-202ENST00000397491 TNS1Q9HBL0 1735 aaKnown RBP12.41□□□□□ -0.42
CHL1-202ENST00000397491 IGHV3-64A0A075B6Q5 118 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 IGLL1P15814 213 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 FOXF2Q12947 444 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 RRN3P1Q2M238 152 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 LYZL1Q6UWQ5 148 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 SHANK3Q9BYB0 1731 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 E9PQ18 207 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 RNASE4P34096 147 aaKnown RBP12.41□□□□□ -0.42
CHL1-202ENST00000397491 CDKN1BP46527 198 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 LCNL1Q6ZST4 164 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 FGFBP3Q8TAT2 258 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 ATP6V0BQ99437 205 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 SCRT1Q9BWW7 348 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 IGKV3D-20A0A0C4DH25 116 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 IFI27P40305 119 aaPredicted RBP12.41□□□□□ -0.42
CHL1-202ENST00000397491 FLVCR1-AS1Q8TAF5 88 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 TNFRSF6BO95407 300 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 TCRAP04437 139 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 CNTFRP26992 372 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 ETDBQ3ZM63 59 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 EXOC3-AS1Q8N2X6 119 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 C8orf46Q8TAG6 207 aa12.41□□□□□ -0.42
CHL1-202ENST00000397491 KLHDC3Q9BQ90 382 aa12.4□□□□□ -0.42
CHL1-202ENST00000397491 GLRXP35754 106 aa12.4□□□□□ -0.42
CHL1-202ENST00000397491 UNQ6494/PRO21346Q6UXR6 183 aa12.4□□□□□ -0.42
CHL1-202ENST00000397491 NPFFR1Q9GZQ6 430 aa12.4□□□□□ -0.42
CHL1-202ENST00000397491 PLSCR4Q9NRQ2 329 aa12.4□□□□□ -0.42
CHL1-202ENST00000397491 F2Z2F3 143 aa12.4□□□□□ -0.43
CHL1-202ENST00000397491 TEX43Q6ZNM6 134 aa12.4□□□□□ -0.43
CHL1-202ENST00000397491 TOMM7Q9P0U1 55 aa12.4□□□□□ -0.43
CHL1-202ENST00000397491 PLXNB2O15031 1838 aa12.4□□□□□ -0.43
CHL1-202ENST00000397491 M0R2P5 195 aa12.39□□□□□ -0.43
CHL1-202ENST00000397491 PVRIGQ6DKI7 326 aa12.39□□□□□ -0.43
CHL1-202ENST00000397491 SNRPD3P62318 126 aaKnown RBP12.39□□□□□ -0.43
CHL1-202ENST00000397491 C2orf82Q6UX34 121 aa12.39□□□□□ -0.43
CHL1-202ENST00000397491 Q6ZVH6 145 aa12.39□□□□□ -0.43
CHL1-202ENST00000397491 FAM90A1Q86YD7 464 aa12.39□□□□□ -0.43
CHL1-202ENST00000397491 SLC25A15Q9Y619 301 aa12.39□□□□□ -0.43
CHL1-202ENST00000397491 LINC00312Q9Y6C7 94 aa12.39□□□□□ -0.43
CHL1-202ENST00000397491 TRAV3A0A0B4J244 114 aa12.39□□□□□ -0.43
CHL1-202ENST00000397491 K7EP34 96 aa12.39□□□□□ -0.43
CHL1-202ENST00000397491 IGKV1D-33P01593 117 aa12.39□□□□□ -0.43
CHL1-202ENST00000397491 IGKV1-33P01594 117 aa12.39□□□□□ -0.43
CHL1-202ENST00000397491 CCL3L1P16619 93 aa12.39□□□□□ -0.43
CHL1-202ENST00000397491 CFPP27918 469 aa12.39□□□□□ -0.43
CHL1-202ENST00000397491 YPEL3P61236 119 aaPredicted RBP12.39□□□□□ -0.43
CHL1-202ENST00000397491 RAX2Q96IS3 184 aa12.39□□□□□ -0.43
CHL1-202ENST00000397491 YAE1D1Q9NRH1 226 aa12.39□□□□□ -0.43
CHL1-202ENST00000397491 RALGAPA1Q6GYQ0 2036 aa12.39□□□□□ -0.43
CHL1-202ENST00000397491 C15orf62A8K5M9 175 aa12.39□□□□□ -0.43
CHL1-202ENST00000397491 LINC00479Q96M42 142 aa12.39□□□□□ -0.43
CHL1-202ENST00000397491 IGHV2-26A0A0B4J1V2 119 aa12.38□□□□□ -0.43
CHL1-202ENST00000397491 CEACAM8P31997 349 aaPredicted RBP12.38□□□□□ -0.43
CHL1-202ENST00000397491 EFNA2O43921 213 aa12.38□□□□□ -0.43
CHL1-202ENST00000397491 NABP1Q96AH0 204 aa12.38□□□□□ -0.43
CHL1-202ENST00000397491 EDA2RQ9HAV5 297 aa12.38□□□□□ -0.43
CHL1-202ENST00000397491 PNRC2Q9NPJ4 139 aaKnown RBP12.38□□□□□ -0.43
CHL1-202ENST00000397491 IGHV2OR16-5A0A0B4J2B6 119 aa12.38□□□□□ -0.43
CHL1-202ENST00000397491 PPP1R32Q7Z5V6 425 aa12.38□□□□□ -0.43
CHL1-202ENST00000397491 AZU1P20160 251 aa12.38□□□□□ -0.43
CHL1-202ENST00000397491 C11orf68Q9H3H3 251 aaKnown RBP12.38□□□□□ -0.43
CHL1-202ENST00000397491 PMS2P5A8MQ11 134 aa12.37□□□□□ -0.43
CHL1-202ENST00000397491 ZNF726P1Q15940 193 aa12.37□□□□□ -0.43
CHL1-202ENST00000397491 MTCL1Q9Y4B5 1905 aaKnown RBP12.37□□□□□ -0.43
CHL1-202ENST00000397491 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.37□□□□□ -0.43
CHL1-202ENST00000397491 VOPP1Q96AW1 172 aa12.37□□□□□ -0.43
CHL1-202ENST00000397491 XIRP1Q702N8 1843 aaKnown RBP12.37□□□□□ -0.43
CHL1-202ENST00000397491 GAGE12HA6NDE8 117 aa12.37□□□□□ -0.43
CHL1-202ENST00000397491 ARPC1AQ92747 370 aa12.37□□□□□ -0.43
CHL1-202ENST00000397491 KLF12Q9Y4X4 402 aa12.37□□□□□ -0.43
CHL1-202ENST00000397491 SCN10AQ9Y5Y9 1956 aa12.37□□□□□ -0.43
CHL1-202ENST00000397491 A0A0U1RRA0 63 aa12.37□□□□□ -0.43
CHL1-202ENST00000397491 FHL1Q13642 323 aa12.37□□□□□ -0.43
CHL1-202ENST00000397491 CYYR1Q96J86 154 aa12.37□□□□□ -0.43
CHL1-202ENST00000397491 ZNF48Q96MX3 618 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms