RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ADAMTS9Q9P2N4 1935 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 PGPEP1LA6NFU8 196 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 FAM19A2Q8N3H0 131 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 TIMM23O14925 209 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 IGHV1-46P01743 117 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 CRPP02741 224 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 EFNA4P52798 201 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 TMEM200BQ69YZ2 307 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 FAM169BQ8N8A8 192 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 SEPSECSQ9HD40 501 aaKnown RBP4.52□□□□□ -1.69
VPS13C-204ENST00000395898 PSG8Q9UQ74 426 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 SLC25A48Q6ZT89 311 aaKnown RBP4.52□□□□□ -1.69
VPS13C-204ENST00000395898 DEPPQ9NTK1 212 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 RIF1Q5UIP0 2472 aaKnown RBP4.52□□□□□ -1.69
VPS13C-204ENST00000395898 TMEM178BH3BS89 294 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 TSKUQ8WUA8 353 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 USMG5Q96IX5 58 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 PRADC1Q9BSG0 188 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 SLC25A39Q9BZJ4 359 aaPredicted RBP4.52□□□□□ -1.69
VPS13C-204ENST00000395898 TRGV4A0A0C4DH28 118 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 A0A1W2PRX2 142 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 CRYGSP22914 178 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 ZNF585BQ52M93 769 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 LYPD1Q8N2G4 141 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 LINC00477Q96M19 166 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 C2orf16Q68DN1 1984 aa4.52□□□□□ -1.69
VPS13C-204ENST00000395898 IGHV1-8P0DP01 117 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 GATA2P23769 480 aaPredicted RBP4.51□□□□□ -1.69
VPS13C-204ENST00000395898 BTCP35070 178 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 ADMP35318 185 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 ERVK11-1P61568 191 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 ZNF672Q499Z4 452 aaPredicted RBP4.51□□□□□ -1.69
VPS13C-204ENST00000395898 C17orf82Q86X59 251 aaPredicted RBP4.51□□□□□ -1.69
VPS13C-204ENST00000395898 C5orf30Q96GV9 206 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 RPUSD1Q9UJJ7 312 aaKnown RBP4.51□□□□□ -1.69
VPS13C-204ENST00000395898 FNDC10F2Z333 226 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 CD59P13987 128 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 SMPXQ9UHP9 88 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 IGHV3-11P01762 117 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 FOXL1Q12952 345 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 SLC25A2Q9BXI2 301 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 A0A1B0GWB2 263 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 OR2K2Q8NGT1 345 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 C1QTNF4Q9BXJ3 329 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 A0A0A6YYD4 124 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 ADARB2-AS1A8MUL3 147 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 LAGE3Q14657 143 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 C15orf32Q32M92 178 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 MBD3L1Q8WWY6 194 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 TRGV9Q99603 122 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 TNRC6AQ8NDV7 1962 aaKnown RBP4.51□□□□□ -1.69
VPS13C-204ENST00000395898 ZNF319Q9P2F9 582 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 IGKCP01834 107 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 MORN3Q6PF18 240 aaPredicted RBP4.51□□□□□ -1.69
VPS13C-204ENST00000395898 VMO1Q7Z5L0 202 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 NABP1Q96AH0 204 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 TRAV41A0A0B4J266 112 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 FAM223BA6NKX1 122 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 SERF1AO75920 110 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 LHFPL1Q86WI0 220 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 FAM223AQ8IWN6 122 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 NPIPB5A8MRT5 1133 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 B4DSR2 109 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 MUC21Q5SSG8 566 aa4.51□□□□□ -1.69
VPS13C-204ENST00000395898 PMS2P5A8MQ11 134 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 SEC11AP67812 179 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 FOXF2Q12947 444 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 TREML4Q6UXN2 200 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 PHLDA1Q8WV24 401 aaPredicted RBP4.5□□□□□ -1.69
VPS13C-204ENST00000395898 GLMPQ8WWB7 406 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 CHTOPQ9Y3Y2 248 aaKnown RBP4.5□□□□□ -1.69
VPS13C-204ENST00000395898 TRBV6-6A0A0A6YYG2 114 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 TRAV1-1A0A0B4J248 108 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 IGHV1-3A0A0C4DH29 117 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 HOXA3O43365 443 aaPredicted RBP4.5□□□□□ -1.69
VPS13C-204ENST00000395898 GATA3P23771 443 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 OR9G4Q8NGQ1 327 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 OCC1Q8TAD7 63 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 NRN1Q9NPD7 142 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 WDR83OSQ9Y284 106 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 BUB1B-PAK6H3BSN5 160 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 PSG1P11464 419 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 CKS1BP61024 79 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 TEX38Q6PEX7 206 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 OR5A1Q8NGJ0 315 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 MUC21A0A0G2JKD1 596 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 MUC21A0A140T8X8 626 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 MBD3L4A6NDZ8 208 aaPredicted RBP4.5□□□□□ -1.69
VPS13C-204ENST00000395898 MBD3L3A6NE82 208 aaPredicted RBP4.5□□□□□ -1.69
VPS13C-204ENST00000395898 MBD3L5A6NJ08 208 aaPredicted RBP4.5□□□□□ -1.69
VPS13C-204ENST00000395898 CA1P00915 261 aaPredicted RBP4.5□□□□□ -1.69
VPS13C-204ENST00000395898 PAX2Q02962 417 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 ZNF415Q09FC8 603 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 LY6G6FQ5SQ64 297 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 MBD3L2Q8NHZ7 208 aaPredicted RBP4.5□□□□□ -1.69
VPS13C-204ENST00000395898 SLC25A15Q9Y619 301 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 USF3Q68DE3 2245 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 A0A1B0GWJ7 208 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 CD24P25063 80 aa4.5□□□□□ -1.69
VPS13C-204ENST00000395898 IGHV3OR16-8A0A075B7F1 116 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms