RNA–Protein interactions for RNA: ENST00000390534.1

TRAJ3-201, Transcript of T cell receptor alpha joining 3, humanhuman

APPRIS P1 BASIC

Gene TRAJ3, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ3-201ENST00000390534 TRAV3A0A0B4J244 114 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 TRBV10-2A0A0K0K1G8 114 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 A0A1B0GVY2 172 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 A0A1B0GX51 115 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 A0A1W2PNN7 141 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 C7orf71A4D174 169 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 ARRDC5A6NEK1 342 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 ODF3BA8MYP8 253 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 H3BMG7 143 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 C19orf84I3L1E1 186 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 J3QQQ9 107 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 NDUFB3O43676 98 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 GGCTO75223 188 aaKnown RBP0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 OR2H2O95918 312 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 TCL1BO95988 128 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 MT-ND4LP03901 98 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 CLPSP04118 112 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 DBIP07108 87 aaKnown RBP0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 HTR1AP08908 422 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 TRGC1P0CF51 173 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 UBBP0CG47 229 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 ZNF705BP0CI00 300 aaPredicted RBP0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 MPC1LP0DKB6 136 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 FABP2P12104 132 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 COX4I1P13073 169 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 HLA-EP13747 358 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 GPX2P18283 190 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 NFYAP23511 347 aaPredicted RBP0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 SDC2P34741 201 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 SRP9P49458 86 aaKnown RBP0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 HINT1P49773 126 aaPredicted RBP0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 FXYD2P54710 66 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 AQP4P55087 323 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 NDUFA6P56556 154 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 KRTAP10-9P60411 292 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 DYNLT1P63172 113 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 HBBP68871 147 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 PSG9Q00887 426 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 HIST1H1AQ02539 215 aaPredicted RBP0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 HES1Q14469 280 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 TAF9Q16594 264 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 PABPC1L2AQ5JQF8 200 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 PRR9Q5T870 116 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 EIF5AL1Q6IS14 154 aaKnown RBP0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 C22orf39Q6P5X5 142 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 LRRC28Q86X40 367 aaPredicted RBP0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 PRR15Q8IV56 129 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 OR4E2Q8NGC2 313 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 OR4K15Q8NH41 348 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 ZNF418Q8TF45 676 aaPredicted RBP0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 DEDD2Q8WXF8 326 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 AQP3Q92482 292 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 MRPS24Q96EL2 167 aaKnown RBP0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 AP1S3Q96PC3 154 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 TSC22D3Q99576 134 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 PKMYT1Q99640 499 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 LXNQ9BS40 222 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 ADAT1Q9BUB4 502 aaKnown RBP0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 TCEAL2Q9H3H9 227 aaPredicted RBP0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 BCL2L10Q9HD36 194 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 CYTL1Q9NRR1 136 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 CBLN4Q9NTU7 201 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 SPANXCQ9NY87 97 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 COPZ2Q9P299 210 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 EPDR1Q9UM22 224 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 BAIAP2Q9UQB8 552 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 CCL26Q9Y258 94 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 U3KQ87 197 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 TNKS1BP1Q9C0C2 1729 aaKnown RBP0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 MYO9BQ13459 2157 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 MPDZO75970 2070 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 SPATA31E1Q6ZUB1 1445 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 ZFC3H1O60293 1989 aaKnown RBP0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 CCDC171Q6TFL3 1326 aa0.63□□□□□ -2.31
TRAJ3-201ENST00000390534 NUMA1Q14980 2115 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 ANAPC1Q9H1A4 1944 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 ECM29Q5VYK3 1845 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 IGKV1D-42A0A075B6H8 117 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 MEIKINA0A087WXM9 373 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 TRAV13-1A0A0B4J241 112 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 TRAV5A0A0B4J249 113 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 IGHV1-58A0A0C4DH39 117 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 IGKV2-24A0A0C4DH68 120 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 MUC21A0A0G2JKD1 596 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 TRBV27A0A0K0K1C4 114 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 LOC107984640A0A0U1RRK4 108 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 MUC21A0A140T8X8 626 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 MEIS3P1A6NDR6 274 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 EFCAB10A6NFE3 127 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 SDHAF1A6NFY7 115 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 OR51F1A6NGY5 319 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 HMSDA8MTL9 139 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 IBA57-AS1B1ANH7 110 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 FNDC10F2Z333 226 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 M0R2Z0 102 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 RER1O15258 196 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 HIST1H2BKO60814 126 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 TIMM17BO60830 172 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 IGLV6-57P01721 117 aa0.62□□□□□ -2.31
TRAJ3-201ENST00000390534 PMP2P02689 132 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms