RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 THAP8Q8NA92 274 aa13.49□□□□□ -0.25
RGP1-201ENST00000378078 DEFB105AQ8NG35 78 aa13.49□□□□□ -0.25
RGP1-201ENST00000378078 DLX4Q92988 240 aaPredicted RBP13.49□□□□□ -0.25
RGP1-201ENST00000378078 TMEM126AQ9H061 195 aa13.49□□□□□ -0.25
RGP1-201ENST00000378078 PLNP26678 52 aa13.49□□□□□ -0.25
RGP1-201ENST00000378078 KLK9Q9UKQ9 250 aa13.49□□□□□ -0.25
RGP1-201ENST00000378078 A6NNC1 897 aa13.49□□□□□ -0.25
RGP1-201ENST00000378078 VWC2LB2RUY7 222 aa13.49□□□□□ -0.25
RGP1-201ENST00000378078 LAGE3Q14657 143 aa13.48□□□□□ -0.25
RGP1-201ENST00000378078 C15orf61A6NNL5 157 aa13.48□□□□□ -0.25
RGP1-201ENST00000378078 TMEM14DPA8MWL7 114 aa13.48□□□□□ -0.25
RGP1-201ENST00000378078 SMIM10L1P0DMW3 83 aa13.48□□□□□ -0.25
RGP1-201ENST00000378078 OCIAD2Q56VL3 154 aa13.48□□□□□ -0.25
RGP1-201ENST00000378078 SMIM10Q96HG1 83 aa13.48□□□□□ -0.25
RGP1-201ENST00000378078 MS4A6AQ9H2W1 248 aa13.48□□□□□ -0.25
RGP1-201ENST00000378078 DOCK3Q8IZD9 2030 aa13.48□□□□□ -0.25
RGP1-201ENST00000378078 IGHV3-38A0A0C4DH36 116 aa13.48□□□□□ -0.25
RGP1-201ENST00000378078 PRR30Q53SZ7 412 aaPredicted RBP13.48□□□□□ -0.25
RGP1-201ENST00000378078 C1QTNF5Q9BXJ0 243 aa13.48□□□□□ -0.25
RGP1-201ENST00000378078 C14orf178Q8N769 122 aaPredicted RBP13.48□□□□□ -0.25
RGP1-201ENST00000378078 ESDP10768 282 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 COL8A2P25067 703 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 SLC50A1Q9BRV3 221 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 MPDZO75970 2070 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 PQLC2LA1A4F0 135 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 CSTL1Q9H114 145 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 VSIRQ9H7M9 311 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 PFN2P35080 140 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 GAGE2AQ6NT46 116 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 ATP5L2Q7Z4Y8 100 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 SMDT1Q9H4I9 107 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 D6R8Y8 96 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 ZNF561-AS1K7EIQ3 104 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 BPESC1Q9GZL8 116 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 ERG28Q9UKR5 140 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 UBR3Q6ZT12 1888 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 GAGE12JA6NER3 117 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 DAD1P61803 113 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 SRSF3P84103 164 aaKnown RBP13.47□□□□□ -0.25
RGP1-201ENST00000378078 GAGE1Q13065 139 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 GAGE4Q13068 117 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 GAGE5Q13069 117 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 GAGE13Q4V321 117 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.47□□□□□ -0.25
RGP1-201ENST00000378078 ZNF319Q9P2F9 582 aa13.47□□□□□ -0.25
RGP1-201ENST00000378078 CA7P43166 264 aa13.46□□□□□ -0.25
RGP1-201ENST00000378078 SS18Q15532 418 aa13.46□□□□□ -0.25
RGP1-201ENST00000378078 TMEM30BQ3MIR4 351 aa13.46□□□□□ -0.25
RGP1-201ENST00000378078 ZNRD1Q9P1U0 126 aa13.46□□□□□ -0.25
RGP1-201ENST00000378078 RPL36AP83881 106 aaKnown RBP13.46□□□□□ -0.25
RGP1-201ENST00000378078 ATXN8Q156A1 80 aa13.46□□□□□ -0.25
RGP1-201ENST00000378078 LINC01590Q5TEZ4 76 aa13.46□□□□□ -0.25
RGP1-201ENST00000378078 ZNF497Q6ZNH5 498 aa13.46□□□□□ -0.25
RGP1-201ENST00000378078 TEX43Q6ZNM6 134 aa13.46□□□□□ -0.25
RGP1-201ENST00000378078 RPL36ALQ969Q0 106 aaKnown RBP13.46□□□□□ -0.25
RGP1-201ENST00000378078 UCP3P55916 312 aa13.46□□□□□ -0.26
RGP1-201ENST00000378078 FOXG1P55316 489 aaPredicted RBP13.46□□□□□ -0.26
RGP1-201ENST00000378078 NRN1Q9NPD7 142 aa13.46□□□□□ -0.26
RGP1-201ENST00000378078 CACNG8Q8WXS5 425 aa13.45□□□□□ -0.26
RGP1-201ENST00000378078 TNFRSF6BO95407 300 aa13.45□□□□□ -0.26
RGP1-201ENST00000378078 LYPD2Q6UXB3 125 aa13.45□□□□□ -0.26
RGP1-201ENST00000378078 PAX9P55771 341 aa13.45□□□□□ -0.26
RGP1-201ENST00000378078 PAQR4Q8N4S7 273 aaPredicted RBP13.45□□□□□ -0.26
RGP1-201ENST00000378078 COL11A2P13942 1736 aaPredicted RBP13.45□□□□□ -0.26
RGP1-201ENST00000378078 TRAV3A0A0B4J244 114 aa13.45□□□□□ -0.26
RGP1-201ENST00000378078 EREGO14944 169 aa13.45□□□□□ -0.26
RGP1-201ENST00000378078 MARF1Q9Y4F3 1742 aaKnown RBP13.44□□□□□ -0.26
RGP1-201ENST00000378078 IGHV1-3A0A0C4DH29 117 aa13.44□□□□□ -0.26
RGP1-201ENST00000378078 PVRIGQ6DKI7 326 aa13.44□□□□□ -0.26
RGP1-201ENST00000378078 LINC01356Q8N9X3 169 aa13.44□□□□□ -0.26
RGP1-201ENST00000378078 DEFB131AP59861 70 aa13.44□□□□□ -0.26
RGP1-201ENST00000378078 BMPERQ8N8U9 685 aa13.44□□□□□ -0.26
RGP1-201ENST00000378078 MDS2Q8NDY4 140 aa13.44□□□□□ -0.26
RGP1-201ENST00000378078 MORN3Q6PF18 240 aaPredicted RBP13.44□□□□□ -0.26
RGP1-201ENST00000378078 SCN5AQ14524 2016 aa13.44□□□□□ -0.26
RGP1-201ENST00000378078 TRAV8-1A0A0A6YYK1 113 aa13.44□□□□□ -0.26
RGP1-201ENST00000378078 SNHG12Q9BXW3 62 aa13.44□□□□□ -0.26
RGP1-201ENST00000378078 NKAPP1Q8N9T2 125 aa13.43□□□□□ -0.26
RGP1-201ENST00000378078 E9PLN8 166 aa13.43□□□□□ -0.26
RGP1-201ENST00000378078 OVOL1O14753 267 aa13.43□□□□□ -0.26
RGP1-201ENST00000378078 NXPH4O95158 308 aa13.43□□□□□ -0.26
RGP1-201ENST00000378078 RPL23P62829 140 aaKnown RBP13.43□□□□□ -0.26
RGP1-201ENST00000378078 TPTE2P1Q5T6R2 138 aa13.43□□□□□ -0.26
RGP1-201ENST00000378078 SH2D1AO60880 128 aa13.43□□□□□ -0.26
RGP1-201ENST00000378078 LYZL1Q6UWQ5 148 aa13.43□□□□□ -0.26
RGP1-201ENST00000378078 COX11Q9Y6N1 276 aa13.43□□□□□ -0.26
RGP1-201ENST00000378078 RP1L1Q8IWN7 2480 aaPredicted RBP13.43□□□□□ -0.26
RGP1-201ENST00000378078 GREB1Q4ZG55 1949 aa13.43□□□□□ -0.26
RGP1-201ENST00000378078 IGHV4-4A0A075B6R2 117 aa13.43□□□□□ -0.26
RGP1-201ENST00000378078 BRWD3Q6RI45 1802 aa13.43□□□□□ -0.26
RGP1-201ENST00000378078 TRAV12-2A0A075B6T6 113 aa13.43□□□□□ -0.26
RGP1-201ENST00000378078 PSG1P11464 419 aa13.43□□□□□ -0.26
RGP1-201ENST00000378078 EFNA4P52798 201 aa13.43□□□□□ -0.26
RGP1-201ENST00000378078 TRAV12-1A0A0B4J245 112 aa13.42□□□□□ -0.26
RGP1-201ENST00000378078 GAGE12BA1L429 117 aa13.42□□□□□ -0.26
RGP1-201ENST00000378078 GAGE7O76087 117 aa13.42□□□□□ -0.26
RGP1-201ENST00000378078 GAGE12FP0CL80 117 aa13.42□□□□□ -0.26
RGP1-201ENST00000378078 GAGE12GP0CL81 117 aa13.42□□□□□ -0.26
RGP1-201ENST00000378078 GAGE12IP0CL82 117 aa13.42□□□□□ -0.26
RGP1-201ENST00000378078 WBP1Q96G27 269 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms