RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 RUSC1-AS1Q66K80 236 aa13.29□□□□□ -0.28
TRIM39-201ENST00000376656 GAFA1Q96PS6 74 aa13.29□□□□□ -0.28
TRIM39-201ENST00000376656 MAP1LC3CQ9BXW4 147 aa13.29□□□□□ -0.28
TRIM39-201ENST00000376656 SVILO95425 2214 aa13.29□□□□□ -0.28
TRIM39-201ENST00000376656 LOC102724200A0A096LPH7 203 aaPredicted RBP13.28□□□□□ -0.28
TRIM39-201ENST00000376656 C19orf71A6NCJ1 209 aa13.28□□□□□ -0.28
TRIM39-201ENST00000376656 TOX4O94842 621 aa13.28□□□□□ -0.28
TRIM39-201ENST00000376656 LAMTOR5O43504 91 aa13.28□□□□□ -0.28
TRIM39-201ENST00000376656 LIPFP07098 398 aa13.28□□□□□ -0.28
TRIM39-201ENST00000376656 PLXNB1O43157 2135 aa13.28□□□□□ -0.28
TRIM39-201ENST00000376656 CD5LO43866 347 aa13.28□□□□□ -0.28
TRIM39-201ENST00000376656 CSN3P07498 182 aa13.28□□□□□ -0.28
TRIM39-201ENST00000376656 PET117Q6UWS5 81 aa13.28□□□□□ -0.28
TRIM39-201ENST00000376656 OR1B1Q8NGR6 318 aa13.28□□□□□ -0.28
TRIM39-201ENST00000376656 OSR1Q8TAX0 266 aaPredicted RBP13.28□□□□□ -0.28
TRIM39-201ENST00000376656 TMUB1Q9BVT8 246 aa13.28□□□□□ -0.28
TRIM39-201ENST00000376656 ASPMQ8IZT6 3477 aa13.27□□□□□ -0.28
TRIM39-201ENST00000376656 CACNA1GO43497 2377 aa13.27□□□□□ -0.28
TRIM39-201ENST00000376656 RBPMS2Q6ZRY4 209 aaKnown RBP13.27□□□□□ -0.28
TRIM39-201ENST00000376656 FAM222BQ8WU58 562 aa13.27□□□□□ -0.28
TRIM39-201ENST00000376656 CHEK1O14757 476 aa13.27□□□□□ -0.29
TRIM39-201ENST00000376656 SNAI2O43623 268 aa13.27□□□□□ -0.29
TRIM39-201ENST00000376656 HIST1H1AQ02539 215 aaPredicted RBP13.27□□□□□ -0.29
TRIM39-201ENST00000376656 THAP8Q8NA92 274 aa13.27□□□□□ -0.29
TRIM39-201ENST00000376656 H1FXQ92522 213 aaKnown RBP13.27□□□□□ -0.29
TRIM39-201ENST00000376656 ZNF71Q9NQZ8 489 aaPredicted RBP13.27□□□□□ -0.29
TRIM39-201ENST00000376656 ZDBF2Q9HCK1 2354 aa13.27□□□□□ -0.29
TRIM39-201ENST00000376656 NBEAP1P0C6P0 100 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 CT83Q5H943 113 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 Q71RC1 249 aaPredicted RBP13.26□□□□□ -0.29
TRIM39-201ENST00000376656 BHLHA15Q7RTS1 189 aaPredicted RBP13.26□□□□□ -0.29
TRIM39-201ENST00000376656 SMIM15Q7Z3B0 74 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 SMIM12Q96EX1 92 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 NDFIP1Q9BT67 221 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 SLC25A15Q9Y619 301 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 SOX21Q9Y651 276 aaPredicted RBP13.26□□□□□ -0.29
TRIM39-201ENST00000376656 GAGE12BA1L429 117 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 LTAP01374 205 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 IGHG3P01860 377 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 HLA-DRB1P01911 266 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 ZNF833PQ6ZTB9 187 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 TMEM265A0A087WTH1 108 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 C22orf46C9J442 243 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 M0R1B8 84 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 APOA2P02652 100 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 OR5AL1P0C617 328 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 GPR183P32249 361 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 DAZAP1Q96EP5 407 aaKnown RBP13.26□□□□□ -0.29
TRIM39-201ENST00000376656 PERPQ96FX8 193 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 RNF7Q9UBF6 113 aa13.26□□□□□ -0.29
TRIM39-201ENST00000376656 C2orf91Q6ZV80 131 aa13.25□□□□□ -0.29
TRIM39-201ENST00000376656 MS4A6AQ9H2W1 248 aa13.25□□□□□ -0.29
TRIM39-201ENST00000376656 LINC00574Q9H8X3 128 aa13.25□□□□□ -0.29
TRIM39-201ENST00000376656 PLSCR4Q9NRQ2 329 aa13.25□□□□□ -0.29
TRIM39-201ENST00000376656 ZNF492Q9P255 531 aa13.25□□□□□ -0.29
TRIM39-201ENST00000376656 S100A7P31151 101 aa13.25□□□□□ -0.29
TRIM39-201ENST00000376656 ARF6P62330 175 aa13.25□□□□□ -0.29
TRIM39-201ENST00000376656 SVIPQ8NHG7 77 aa13.25□□□□□ -0.29
TRIM39-201ENST00000376656 SP9P0CG40 484 aa13.24□□□□□ -0.29
TRIM39-201ENST00000376656 FMC1Q96HJ9 113 aa13.24□□□□□ -0.29
TRIM39-201ENST00000376656 TRAV8-1A0A0A6YYK1 113 aa13.24□□□□□ -0.29
TRIM39-201ENST00000376656 INS-IGF2F8WCM5 200 aa13.24□□□□□ -0.29
TRIM39-201ENST00000376656 TCRAP04437 139 aa13.24□□□□□ -0.29
TRIM39-201ENST00000376656 DIAPH2-AS1Q14236 149 aa13.24□□□□□ -0.29
TRIM39-201ENST00000376656 CIARTQ8N365 385 aaPredicted RBP13.24□□□□□ -0.29
TRIM39-201ENST00000376656 FLYWCH2Q96CP2 140 aaKnown RBP13.24□□□□□ -0.29
TRIM39-201ENST00000376656 FAM87AP0C7U9 286 aa13.24□□□□□ -0.29
TRIM39-201ENST00000376656 LINC01545Q5VT33 79 aa13.24□□□□□ -0.29
TRIM39-201ENST00000376656 TEX45Q8NA69 505 aa13.24□□□□□ -0.29
TRIM39-201ENST00000376656 C5orf17Q8NAS9 161 aa13.24□□□□□ -0.29
TRIM39-201ENST00000376656 TMEM167AQ8TBQ9 72 aa13.24□□□□□ -0.29
TRIM39-201ENST00000376656 GFRA4Q9GZZ7 299 aa13.24□□□□□ -0.29
TRIM39-201ENST00000376656 HSPB8Q9UJY1 196 aa13.24□□□□□ -0.29
TRIM39-201ENST00000376656 SSUH2Q9Y2M2 353 aa13.24□□□□□ -0.29
TRIM39-201ENST00000376656 GPR179Q6PRD1 2367 aa13.23□□□□□ -0.29
TRIM39-201ENST00000376656 ZNF788Q6ZQV5 615 aa13.23□□□□□ -0.29
TRIM39-201ENST00000376656 ZCCHC24Q8N2G6 241 aaKnown RBP13.23□□□□□ -0.29
TRIM39-201ENST00000376656 STXBP6Q8NFX7 210 aa13.23□□□□□ -0.29
TRIM39-201ENST00000376656 Q9H3A6 140 aa13.23□□□□□ -0.29
TRIM39-201ENST00000376656 PRR33A8MZF0 331 aa13.23□□□□□ -0.29
TRIM39-201ENST00000376656 NCR2O95944 276 aa13.23□□□□□ -0.29
TRIM39-201ENST00000376656 APOHP02749 345 aaPredicted RBP13.23□□□□□ -0.29
TRIM39-201ENST00000376656 FAM71F2Q6NXP2 309 aa13.23□□□□□ -0.29
TRIM39-201ENST00000376656 OR5AN1Q8NGI8 311 aa13.23□□□□□ -0.29
TRIM39-201ENST00000376656 NEU4Q8WWR8 484 aaPredicted RBP13.23□□□□□ -0.29
TRIM39-201ENST00000376656 DKK4Q9UBT3 224 aa13.23□□□□□ -0.29
TRIM39-201ENST00000376656 PEF1Q9UBV8 284 aaKnown RBP13.23□□□□□ -0.29
TRIM39-201ENST00000376656 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.23□□□□□ -0.29
TRIM39-201ENST00000376656 C7orf71A4D174 169 aa13.23□□□□□ -0.29
TRIM39-201ENST00000376656 COX8AP10176 69 aa13.23□□□□□ -0.29
TRIM39-201ENST00000376656 CLEC2AQ6UVW9 174 aa13.23□□□□□ -0.29
TRIM39-201ENST00000376656 PROCRQ9UNN8 238 aa13.23□□□□□ -0.29
TRIM39-201ENST00000376656 TM4SF5O14894 197 aa13.22□□□□□ -0.29
TRIM39-201ENST00000376656 GP9P14770 177 aa13.22□□□□□ -0.29
TRIM39-201ENST00000376656 COL8A1P27658 744 aa13.22□□□□□ -0.29
TRIM39-201ENST00000376656 HTR1DP28221 377 aa13.22□□□□□ -0.29
TRIM39-201ENST00000376656 SUB1P53999 127 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRIM39-201ENST00000376656 SARAFQ96BY9 339 aa13.22□□□□□ -0.29
TRIM39-201ENST00000376656 CSTL1Q9H114 145 aa13.22□□□□□ -0.29
TRIM39-201ENST00000376656 TPSG1Q9NRR2 321 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms