RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 IGHV3-16A0A0C4DH30 117 aa12.48□□□□□ -0.41
CUL3-202ENST00000344951 TM4SF5O14894 197 aa12.48□□□□□ -0.41
CUL3-202ENST00000344951 GAGE2AQ6NT46 116 aa12.48□□□□□ -0.41
CUL3-202ENST00000344951 A0A087WWL8 130 aa12.48□□□□□ -0.41
CUL3-202ENST00000344951 COLCA2A8K830 154 aa12.48□□□□□ -0.41
CUL3-202ENST00000344951 TCRAP04437 139 aa12.48□□□□□ -0.41
CUL3-202ENST00000344951 PSG8Q9UQ74 426 aa12.48□□□□□ -0.41
CUL3-202ENST00000344951 TRAV25A0A0B4J276 109 aa12.47□□□□□ -0.41
CUL3-202ENST00000344951 PRDM13Q9H4Q3 707 aa12.47□□□□□ -0.41
CUL3-202ENST00000344951 SBF2Q86WG5 1849 aa12.47□□□□□ -0.41
CUL3-202ENST00000344951 SVILO95425 2214 aa12.47□□□□□ -0.41
CUL3-202ENST00000344951 LYPD3O95274 346 aa12.47□□□□□ -0.41
CUL3-202ENST00000344951 EXOC3-AS1Q8N2X6 119 aa12.47□□□□□ -0.41
CUL3-202ENST00000344951 HIST1H2BLQ99880 126 aa12.47□□□□□ -0.41
CUL3-202ENST00000344951 RNASE6Q93091 150 aaKnown RBP12.47□□□□□ -0.41
CUL3-202ENST00000344951 UNC13CQ8NB66 2214 aa12.47□□□□□ -0.41
CUL3-202ENST00000344951 TRAV9-1A0A075B6T8 112 aa12.46□□□□□ -0.41
CUL3-202ENST00000344951 TRAV41A0A0B4J266 112 aa12.46□□□□□ -0.41
CUL3-202ENST00000344951 CSRP2Q16527 193 aa12.46□□□□□ -0.41
CUL3-202ENST00000344951 ATP5L2Q7Z4Y8 100 aa12.46□□□□□ -0.41
CUL3-202ENST00000344951 REG4Q9BYZ8 158 aa12.46□□□□□ -0.41
CUL3-202ENST00000344951 ERCC8Q13216 396 aa12.46□□□□□ -0.41
CUL3-202ENST00000344951 PAQR4Q8N4S7 273 aaPredicted RBP12.46□□□□□ -0.41
CUL3-202ENST00000344951 C5orf30Q96GV9 206 aa12.46□□□□□ -0.41
CUL3-202ENST00000344951 IGKV1D-8A0A087WSZ0 117 aa12.46□□□□□ -0.41
CUL3-202ENST00000344951 A8MWV9 139 aa12.46□□□□□ -0.41
CUL3-202ENST00000344951 HIST3H2BBQ8N257 126 aa12.46□□□□□ -0.41
CUL3-202ENST00000344951 LGALS1P09382 135 aaKnown RBP12.46□□□□□ -0.42
CUL3-202ENST00000344951 C1QTNF5Q9BXJ0 243 aa12.46□□□□□ -0.42
CUL3-202ENST00000344951 IGKV1-9A0A0C4DH69 117 aa12.46□□□□□ -0.42
CUL3-202ENST00000344951 F5H768 121 aa12.46□□□□□ -0.42
CUL3-202ENST00000344951 GAS1P54826 345 aa12.46□□□□□ -0.42
CUL3-202ENST00000344951 MORN3Q6PF18 240 aaPredicted RBP12.45□□□□□ -0.42
CUL3-202ENST00000344951 RPUSD1Q9UJJ7 312 aaKnown RBP12.45□□□□□ -0.42
CUL3-202ENST00000344951 TMEM133Q9H2Q1 129 aa12.45□□□□□ -0.42
CUL3-202ENST00000344951 LINC00312Q9Y6C7 94 aa12.45□□□□□ -0.42
CUL3-202ENST00000344951 KLF17Q5JT82 389 aaPredicted RBP12.45□□□□□ -0.42
CUL3-202ENST00000344951 KNCNA6PVL3 124 aa12.45□□□□□ -0.42
CUL3-202ENST00000344951 SRRM4A7MD48 611 aaKnown RBP12.45□□□□□ -0.42
CUL3-202ENST00000344951 ZNF124Q15973 351 aa12.45□□□□□ -0.42
CUL3-202ENST00000344951 CD5P06127 495 aa12.44□□□□□ -0.42
CUL3-202ENST00000344951 SSBP2P81877 361 aaPredicted RBP12.44□□□□□ -0.42
CUL3-202ENST00000344951 Q8TAT8 98 aa12.44□□□□□ -0.42
CUL3-202ENST00000344951 MCRIP2Q9BUT9 160 aaKnown RBP12.44□□□□□ -0.42
CUL3-202ENST00000344951 GGTLC1Q9BX51 225 aa12.44□□□□□ -0.42
CUL3-202ENST00000344951 TAF1LQ8IZX4 1826 aa12.44□□□□□ -0.42
CUL3-202ENST00000344951 C10orf55Q5SWW7 151 aa12.44□□□□□ -0.42
CUL3-202ENST00000344951 SPXQ9BT56 116 aa12.44□□□□□ -0.42
CUL3-202ENST00000344951 CYTL1Q9NRR1 136 aa12.44□□□□□ -0.42
CUL3-202ENST00000344951 C15orf32Q32M92 178 aa12.44□□□□□ -0.42
CUL3-202ENST00000344951 PARP14Q460N5 1801 aa12.44□□□□□ -0.42
CUL3-202ENST00000344951 UPK2O00526 184 aa12.44□□□□□ -0.42
CUL3-202ENST00000344951 LY6HO94772 140 aa12.44□□□□□ -0.42
CUL3-202ENST00000344951 POLR2AP24928 1970 aaKnown RBP12.43□□□□□ -0.42
CUL3-202ENST00000344951 TRBV6-7A0A0A0MS04 114 aa12.43□□□□□ -0.42
CUL3-202ENST00000344951 H3BUX3 64 aa12.43□□□□□ -0.42
CUL3-202ENST00000344951 SAMD5Q5TGI4 173 aa12.43□□□□□ -0.42
CUL3-202ENST00000344951 ATP5IP56385 69 aaPredicted RBP12.43□□□□□ -0.42
CUL3-202ENST00000344951 PIP4P2Q8N4L2 257 aa12.43□□□□□ -0.42
CUL3-202ENST00000344951 OCC1Q8TAD7 63 aa12.43□□□□□ -0.42
CUL3-202ENST00000344951 SMKR1H3BMG3 65 aa12.43□□□□□ -0.42
CUL3-202ENST00000344951 OR9G9P0C7N8 305 aa12.43□□□□□ -0.42
CUL3-202ENST00000344951 LAGE3Q14657 143 aa12.43□□□□□ -0.42
CUL3-202ENST00000344951 FAM166AQ6J272 317 aa12.43□□□□□ -0.42
CUL3-202ENST00000344951 SLC50A1Q9BRV3 221 aa12.43□□□□□ -0.42
CUL3-202ENST00000344951 SNHG12Q9BXW3 62 aa12.43□□□□□ -0.42
CUL3-202ENST00000344951 MBNL3Q9NUK0 354 aaKnown RBP12.43□□□□□ -0.42
CUL3-202ENST00000344951 PMS2P5A8MQ11 134 aa12.43□□□□□ -0.42
CUL3-202ENST00000344951 RBMY1FQ15415 496 aaKnown RBP12.43□□□□□ -0.42
CUL3-202ENST00000344951 CLPSL2Q6UWE3 100 aa12.43□□□□□ -0.42
CUL3-202ENST00000344951 TMEM30BQ3MIR4 351 aa12.42□□□□□ -0.42
CUL3-202ENST00000344951 SPACA3Q8IXA5 215 aa12.42□□□□□ -0.42
CUL3-202ENST00000344951 ZNF319Q9P2F9 582 aa12.42□□□□□ -0.42
CUL3-202ENST00000344951 AMBPP02760 352 aa12.42□□□□□ -0.42
CUL3-202ENST00000344951 CEACAM1P13688 526 aa12.42□□□□□ -0.42
CUL3-202ENST00000344951 TEX43Q6ZNM6 134 aa12.42□□□□□ -0.42
CUL3-202ENST00000344951 MSRB2Q9Y3D2 182 aa12.42□□□□□ -0.42
CUL3-202ENST00000344951 RPL36AP83881 106 aaKnown RBP12.42□□□□□ -0.42
CUL3-202ENST00000344951 RPL36ALQ969Q0 106 aaKnown RBP12.42□□□□□ -0.42
CUL3-202ENST00000344951 TRAV9-2A0A087WT02 112 aa12.42□□□□□ -0.42
CUL3-202ENST00000344951 ZNF479Q96JC4 524 aa12.42□□□□□ -0.42
CUL3-202ENST00000344951 SPTBP11277 2137 aa12.42□□□□□ -0.42
CUL3-202ENST00000344951 C2orf82Q6UX34 121 aa12.42□□□□□ -0.42
CUL3-202ENST00000344951 SPOCK3Q9BQ16 436 aa12.42□□□□□ -0.42
CUL3-202ENST00000344951 RFNGQ9Y644 331 aa12.42□□□□□ -0.42
CUL3-202ENST00000344951 A0A1W2PR77 199 aa12.41□□□□□ -0.42
CUL3-202ENST00000344951 SELLP14151 372 aa12.41□□□□□ -0.42
CUL3-202ENST00000344951 PFN2P35080 140 aa12.41□□□□□ -0.42
CUL3-202ENST00000344951 D6R8Y8 96 aa12.41□□□□□ -0.42
CUL3-202ENST00000344951 SPRR3Q9UBC9 169 aa12.41□□□□□ -0.42
CUL3-202ENST00000344951 FOXF2Q12947 444 aa12.41□□□□□ -0.42
CUL3-202ENST00000344951 GAGE13Q4V321 117 aa12.41□□□□□ -0.42
CUL3-202ENST00000344951 SIGMAR1Q99720 223 aa12.41□□□□□ -0.42
CUL3-202ENST00000344951 TRAV12-1A0A0B4J245 112 aa12.41□□□□□ -0.42
CUL3-202ENST00000344951 MPZP25189 248 aa12.41□□□□□ -0.42
CUL3-202ENST00000344951 C14orf178Q8N769 122 aaPredicted RBP12.41□□□□□ -0.42
CUL3-202ENST00000344951 THSD7AQ9UPZ6 1657 aa12.41□□□□□ -0.42
CUL3-202ENST00000344951 ZNF561-AS1K7EIQ3 104 aa12.4□□□□□ -0.42
CUL3-202ENST00000344951 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.4□□□□□ -0.42
CUL3-202ENST00000344951 DLX4Q92988 240 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms