RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 LRP5O75197 1615 aa9.77□□□□□ -0.84
SHANK2-201ENST00000338508 F5H768 121 aa9.77□□□□□ -0.84
SHANK2-201ENST00000338508 LAGE3Q14657 143 aa9.77□□□□□ -0.84
SHANK2-201ENST00000338508 MORN2Q502X0 79 aa9.77□□□□□ -0.84
SHANK2-201ENST00000338508 SPOCK3Q9BQ16 436 aa9.77□□□□□ -0.84
SHANK2-201ENST00000338508 A0A087WWL8 130 aa9.77□□□□□ -0.85
SHANK2-201ENST00000338508 TMEM14DPA8MWL7 114 aa9.77□□□□□ -0.85
SHANK2-201ENST00000338508 TCRAP04437 139 aa9.77□□□□□ -0.85
SHANK2-201ENST00000338508 LINC00477Q96M19 166 aa9.77□□□□□ -0.85
SHANK2-201ENST00000338508 NDUFS5O43920 106 aa9.77□□□□□ -0.85
SHANK2-201ENST00000338508 CACNA1BQ00975 2339 aa9.77□□□□□ -0.85
SHANK2-201ENST00000338508 RPL36AP83881 106 aaKnown RBP9.77□□□□□ -0.85
SHANK2-201ENST00000338508 RPL36ALQ969Q0 106 aaKnown RBP9.77□□□□□ -0.85
SHANK2-201ENST00000338508 DMRT1Q9Y5R6 373 aa9.77□□□□□ -0.85
SHANK2-201ENST00000338508 MED12Q93074 2177 aa9.77□□□□□ -0.85
SHANK2-201ENST00000338508 IGHV3-16A0A0C4DH30 117 aa9.77□□□□□ -0.85
SHANK2-201ENST00000338508 OR9G9P0C7N8 305 aa9.77□□□□□ -0.85
SHANK2-201ENST00000338508 Q6AWC8 147 aa9.77□□□□□ -0.85
SHANK2-201ENST00000338508 SPRR3Q9UBC9 169 aa9.77□□□□□ -0.85
SHANK2-201ENST00000338508 TRAV25A0A0B4J276 109 aa9.77□□□□□ -0.85
SHANK2-201ENST00000338508 SP7Q8TDD2 431 aaPredicted RBP9.77□□□□□ -0.85
SHANK2-201ENST00000338508 ORMDL2Q53FV1 153 aa9.76□□□□□ -0.85
SHANK2-201ENST00000338508 TCF20Q9UGU0 1960 aaKnown RBP9.76□□□□□ -0.85
SHANK2-201ENST00000338508 SSBP2P81877 361 aaPredicted RBP9.76□□□□□ -0.85
SHANK2-201ENST00000338508 KLF17Q5JT82 389 aaPredicted RBP9.76□□□□□ -0.85
SHANK2-201ENST00000338508 NPDC1Q9NQX5 325 aaPredicted RBP9.76□□□□□ -0.85
SHANK2-201ENST00000338508 IQCF6A8MYZ5 107 aa9.76□□□□□ -0.85
SHANK2-201ENST00000338508 LY6HO94772 140 aa9.76□□□□□ -0.85
SHANK2-201ENST00000338508 FAM181AQ8N9Y4 354 aa9.76□□□□□ -0.85
SHANK2-201ENST00000338508 GREB1Q4ZG55 1949 aa9.76□□□□□ -0.85
SHANK2-201ENST00000338508 FOXF2Q12947 444 aa9.76□□□□□ -0.85
SHANK2-201ENST00000338508 CACNG8Q8WXS5 425 aa9.76□□□□□ -0.85
SHANK2-201ENST00000338508 SAMD5Q5TGI4 173 aa9.76□□□□□ -0.85
SHANK2-201ENST00000338508 GAGE2AQ6NT46 116 aa9.76□□□□□ -0.85
SHANK2-201ENST00000338508 TEX43Q6ZNM6 134 aa9.76□□□□□ -0.85
SHANK2-201ENST00000338508 SPXQ9BT56 116 aa9.76□□□□□ -0.85
SHANK2-201ENST00000338508 RPUSD1Q9UJJ7 312 aaKnown RBP9.76□□□□□ -0.85
SHANK2-201ENST00000338508 IGHV1-18A0A0C4DH31 117 aa9.75□□□□□ -0.85
SHANK2-201ENST00000338508 C15orf61A6NNL5 157 aa9.75□□□□□ -0.85
SHANK2-201ENST00000338508 C10orf55Q5SWW7 151 aa9.75□□□□□ -0.85
SHANK2-201ENST00000338508 PVRIGQ6DKI7 326 aa9.75□□□□□ -0.85
SHANK2-201ENST00000338508 CLPSL1A2RUU4 121 aa9.75□□□□□ -0.85
SHANK2-201ENST00000338508 GGTLC1Q9BX51 225 aa9.75□□□□□ -0.85
SHANK2-201ENST00000338508 MBNL3Q9NUK0 354 aaKnown RBP9.75□□□□□ -0.85
SHANK2-201ENST00000338508 ATP5IP56385 69 aaPredicted RBP9.75□□□□□ -0.85
SHANK2-201ENST00000338508 RPL23P62829 140 aaKnown RBP9.75□□□□□ -0.85
SHANK2-201ENST00000338508 TMEM105Q8N8V8 129 aa9.75□□□□□ -0.85
SHANK2-201ENST00000338508 Q8TAT8 98 aa9.75□□□□□ -0.85
SHANK2-201ENST00000338508 RTBDNQ9BSG5 229 aaPredicted RBP9.75□□□□□ -0.85
SHANK2-201ENST00000338508 SNHG12Q9BXW3 62 aa9.75□□□□□ -0.85
SHANK2-201ENST00000338508 ERVH48-1M5A8F1 160 aa9.75□□□□□ -0.85
SHANK2-201ENST00000338508 SS18Q15532 418 aa9.75□□□□□ -0.85
SHANK2-201ENST00000338508 A0A096LPF7 62 aa9.75□□□□□ -0.85
SHANK2-201ENST00000338508 SRP19P09132 144 aaKnown RBP9.75□□□□□ -0.85
SHANK2-201ENST00000338508 A0A1B0GW15 77 aa9.74□□□□□ -0.85
SHANK2-201ENST00000338508 RBMY1FQ15415 496 aaKnown RBP9.74□□□□□ -0.85
SHANK2-201ENST00000338508 ZNF672Q499Z4 452 aaPredicted RBP9.74□□□□□ -0.85
SHANK2-201ENST00000338508 LEPROTO15243 131 aa9.74□□□□□ -0.85
SHANK2-201ENST00000338508 LINC01590Q5TEZ4 76 aa9.74□□□□□ -0.85
SHANK2-201ENST00000338508 IFI27L1Q96BM0 104 aa9.74□□□□□ -0.85
SHANK2-201ENST00000338508 IGKV1D-13A0A0B4J2D9 117 aa9.74□□□□□ -0.85
SHANK2-201ENST00000338508 ZNF561-AS1K7EIQ3 104 aa9.74□□□□□ -0.85
SHANK2-201ENST00000338508 IGKV1-13P0DP09 117 aa9.74□□□□□ -0.85
SHANK2-201ENST00000338508 SELLP14151 372 aa9.74□□□□□ -0.85
SHANK2-201ENST00000338508 DLX4Q92988 240 aaPredicted RBP9.74□□□□□ -0.85
SHANK2-201ENST00000338508 D6R8Y8 96 aa9.74□□□□□ -0.85
SHANK2-201ENST00000338508 OVOL1O14753 267 aa9.74□□□□□ -0.85
SHANK2-201ENST00000338508 GAGE13Q4V321 117 aa9.74□□□□□ -0.85
SHANK2-201ENST00000338508 C2orf82Q6UX34 121 aa9.74□□□□□ -0.85
SHANK2-201ENST00000338508 SIGMAR1Q99720 223 aa9.74□□□□□ -0.85
SHANK2-201ENST00000338508 C1QTNF5Q9BXJ0 243 aa9.74□□□□□ -0.85
SHANK2-201ENST00000338508 LAMTOR2Q9Y2Q5 125 aa9.74□□□□□ -0.85
SHANK2-201ENST00000338508 MSRB2Q9Y3D2 182 aa9.74□□□□□ -0.85
SHANK2-201ENST00000338508 A6NNC1 897 aa9.74□□□□□ -0.85
SHANK2-201ENST00000338508 PRDM13Q9H4Q3 707 aa9.74□□□□□ -0.85
SHANK2-201ENST00000338508 ZNF479Q96JC4 524 aa9.73□□□□□ -0.85
SHANK2-201ENST00000338508 CSTL1Q9H114 145 aa9.73□□□□□ -0.85
SHANK2-201ENST00000338508 KNCNA6PVL3 124 aa9.73□□□□□ -0.85
SHANK2-201ENST00000338508 SMKR1H3BMG3 65 aa9.73□□□□□ -0.85
SHANK2-201ENST00000338508 TMEM144Q7Z5S9 345 aa9.73□□□□□ -0.85
SHANK2-201ENST00000338508 C14orf178Q8N769 122 aaPredicted RBP9.73□□□□□ -0.85
SHANK2-201ENST00000338508 ZNF525Q8N782 197 aa9.73□□□□□ -0.85
SHANK2-201ENST00000338508 ZNF319Q9P2F9 582 aa9.73□□□□□ -0.85
SHANK2-201ENST00000338508 SMIM10L1P0DMW3 83 aa9.73□□□□□ -0.85
SHANK2-201ENST00000338508 SMIM10Q96HG1 83 aa9.73□□□□□ -0.85
SHANK2-201ENST00000338508 LTBP4Q8N2S1 1624 aa9.73□□□□□ -0.85
SHANK2-201ENST00000338508 IGHV2-26A0A0B4J1V2 119 aa9.73□□□□□ -0.85
SHANK2-201ENST00000338508 KLF12Q9Y4X4 402 aa9.73□□□□□ -0.85
SHANK2-201ENST00000338508 LOC102723996A0A087X1L8 192 aa9.73□□□□□ -0.85
SHANK2-201ENST00000338508 SPSB3Q6PJ21 355 aa9.73□□□□□ -0.85
SHANK2-201ENST00000338508 THAP8Q8NA92 274 aa9.73□□□□□ -0.85
SHANK2-201ENST00000338508 NHLRC3Q5JS37 347 aa9.73□□□□□ -0.85
SHANK2-201ENST00000338508 CLPSL2Q6UWE3 100 aa9.73□□□□□ -0.85
SHANK2-201ENST00000338508 OCC1Q8TAD7 63 aa9.73□□□□□ -0.85
SHANK2-201ENST00000338508 NOTCH3Q9UM47 2321 aa9.72□□□□□ -0.85
SHANK2-201ENST00000338508 TMEM238C9JI98 176 aa9.72□□□□□ -0.85
SHANK2-201ENST00000338508 YPEL1O60688 119 aa9.72□□□□□ -0.85
SHANK2-201ENST00000338508 PFN2P35080 140 aa9.72□□□□□ -0.85
SHANK2-201ENST00000338508 YPEL2Q96QA6 119 aa9.72□□□□□ -0.85
SHANK2-201ENST00000338508 PQLC2LA1A4F0 135 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms