RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 FZR1Q9UM11 496 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 CXCL13O43927 109 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 FOXH1O75593 365 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 SCGB1C2P0DMR2 95 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 CT45A10P0DMU9 189 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 MBNL2Q5VZF2 373 aaKnown RBP9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 TUSC5Q8IXB3 177 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 OR9G4Q8NGQ1 327 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 OSR1Q8TAX0 266 aaPredicted RBP9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 H1FXQ92522 213 aaKnown RBP9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 GRAMD2BQ96HH9 432 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 FAM110AQ9BQ89 295 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 SMAD7O15105 426 aaKnown RBP9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 CRYGCP07315 174 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 ALKBH6Q3KRA9 238 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 NUP35Q8NFH5 326 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 GLMPQ8WWB7 406 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 PLPPR2Q96GM1 343 aa9.6□□□□□ -0.87
LDLRAD3-201ENST00000315571 ZNF716A6NP11 495 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 M0QXV9 152 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 FXYD7P58549 80 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 HBBP68871 147 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 PLP2Q04941 152 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 TMEM14EPQ6UXP3 125 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 PRELID3AQ96N28 172 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 GPR82Q96P67 336 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 SPATA25Q9BR10 227 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 TMEM167BQ9NRX6 74 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 CFAP47Q6ZTR5 3102 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 TMEM189A5PLL7 270 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 PRSS1P07477 247 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 KLRB1Q12918 225 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 GGNQ86UU5 652 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 FAM168AQ92567 244 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 HIST1H4GQ99525 98 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 PIEZO2Q9H5I5 2752 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 IGKV1-12A0A0C4DH73 117 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 A0A1W2PRD5 423 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 A0A1W2PRF3 423 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 A0A1W2PRM7 423 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 C9JCJ5 164 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 IGKV1D-12P01611 117 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 IGHG3P01860 377 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 HES4Q9HCC6 221 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 SPRR3Q9UBC9 169 aa9.59□□□□□ -0.87
LDLRAD3-201ENST00000315571 ZFHX4Q86UP3 3567 aa9.58□□□□□ -0.88
LDLRAD3-201ENST00000315571 SPTA1P02549 2419 aa9.58□□□□□ -0.88
LDLRAD3-201ENST00000315571 PSMB2P49721 201 aa9.58□□□□□ -0.88
LDLRAD3-201ENST00000315571 LRRC29Q8WV35 223 aa9.58□□□□□ -0.88
LDLRAD3-201ENST00000315571 IGHV3-15A0A0B4J1V0 119 aa9.58□□□□□ -0.88
LDLRAD3-201ENST00000315571 ZNHIT1O43257 154 aa9.58□□□□□ -0.88
LDLRAD3-201ENST00000315571 TSPAN13O95857 204 aa9.58□□□□□ -0.88
LDLRAD3-201ENST00000315571 OPRK1P41145 380 aa9.58□□□□□ -0.88
LDLRAD3-201ENST00000315571 LY6DQ14210 128 aa9.58□□□□□ -0.88
LDLRAD3-201ENST00000315571 C1RLQ9NZP8 487 aa9.58□□□□□ -0.88
LDLRAD3-201ENST00000315571 LOC400499M0QZD8 3231 aa9.58□□□□□ -0.88
LDLRAD3-201ENST00000315571 hCG_38984A0A1B0GV85 526 aa9.58□□□□□ -0.88
LDLRAD3-201ENST00000315571 FOXI3A8MTJ6 420 aaPredicted RBP9.58□□□□□ -0.88
LDLRAD3-201ENST00000315571 DNPH1O43598 174 aa9.58□□□□□ -0.88
LDLRAD3-201ENST00000315571 UBE2L3P68036 154 aaKnown RBP9.58□□□□□ -0.88
LDLRAD3-201ENST00000315571 PCP2Q8IVA1 136 aa9.58□□□□□ -0.88
LDLRAD3-201ENST00000315571 CHCHD1Q96BP2 118 aaKnown RBP9.58□□□□□ -0.88
LDLRAD3-201ENST00000315571 SRXN1Q9BYN0 137 aa9.58□□□□□ -0.88
LDLRAD3-201ENST00000315571 PRTN3P24158 256 aa9.57□□□□□ -0.88
LDLRAD3-201ENST00000315571 ERVK-16P61578 105 aa9.57□□□□□ -0.88
LDLRAD3-201ENST00000315571 Q8NA96 180 aa9.57□□□□□ -0.88
LDLRAD3-201ENST00000315571 ZNF414Q96IQ9 312 aa9.57□□□□□ -0.88
LDLRAD3-201ENST00000315571 LINC00479Q96M42 142 aa9.57□□□□□ -0.88
LDLRAD3-201ENST00000315571 C18orf15Q96N68 181 aa9.57□□□□□ -0.88
LDLRAD3-201ENST00000315571 OBP2BQ9NPH6 170 aa9.57□□□□□ -0.88
LDLRAD3-201ENST00000315571 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.57□□□□□ -0.88
LDLRAD3-201ENST00000315571 UCN2Q96RP3 112 aa9.57□□□□□ -0.88
LDLRAD3-201ENST00000315571 MPC1Q9Y5U8 109 aa9.57□□□□□ -0.88
LDLRAD3-201ENST00000315571 PKD1L2Q7Z442 2459 aa9.57□□□□□ -0.88
LDLRAD3-201ENST00000315571 MEIG1Q5JSS6 88 aa9.57□□□□□ -0.88
LDLRAD3-201ENST00000315571 C2orf91Q6ZV80 131 aa9.57□□□□□ -0.88
LDLRAD3-201ENST00000315571 MIR17HGQ75NE6 70 aa9.57□□□□□ -0.88
LDLRAD3-201ENST00000315571 TTC9CQ8N5M4 171 aa9.57□□□□□ -0.88
LDLRAD3-201ENST00000315571 REPIN1Q9BWE0 567 aaKnown RBP9.57□□□□□ -0.88
LDLRAD3-201ENST00000315571 VCX2Q9H322 139 aa9.57□□□□□ -0.88
LDLRAD3-201ENST00000315571 IGKV1-27A0A075B6S5 117 aa9.56□□□□□ -0.88
LDLRAD3-201ENST00000315571 TRAV8-2A0A0B4J237 113 aa9.56□□□□□ -0.88
LDLRAD3-201ENST00000315571 FAM90A26D6RGX4 464 aa9.56□□□□□ -0.88
LDLRAD3-201ENST00000315571 P01737 135 aa9.56□□□□□ -0.88
LDLRAD3-201ENST00000315571 Q6ZUT4 128 aa9.56□□□□□ -0.88
LDLRAD3-201ENST00000315571 ZNF295-AS1Q8N0V1 137 aa9.56□□□□□ -0.88
LDLRAD3-201ENST00000315571 SNRNP40Q96DI7 357 aaKnown RBP9.56□□□□□ -0.88
LDLRAD3-201ENST00000315571 ZNF391Q9UJN7 358 aa9.56□□□□□ -0.88
LDLRAD3-201ENST00000315571 WISP2O76076 250 aa9.56□□□□□ -0.88
LDLRAD3-201ENST00000315571 FXYD2P54710 66 aa9.56□□□□□ -0.88
LDLRAD3-201ENST00000315571 SSBP2P81877 361 aaPredicted RBP9.56□□□□□ -0.88
LDLRAD3-201ENST00000315571 FOXE3Q13461 319 aa9.56□□□□□ -0.88
LDLRAD3-201ENST00000315571 ABHD12Q8N2K0 398 aa9.56□□□□□ -0.88
LDLRAD3-201ENST00000315571 ZNF488Q96MN9 340 aa9.56□□□□□ -0.88
LDLRAD3-201ENST00000315571 OXGR1Q96P68 337 aa9.56□□□□□ -0.88
LDLRAD3-201ENST00000315571 SPXQ9BT56 116 aa9.55□□□□□ -0.88
LDLRAD3-201ENST00000315571 DSPP15924 2871 aaKnown RBP9.55□□□□□ -0.88
LDLRAD3-201ENST00000315571 LAMA5O15230 3695 aa9.55□□□□□ -0.88
LDLRAD3-201ENST00000315571 TLN1Q9Y490 2541 aaKnown RBP9.55□□□□□ -0.88
LDLRAD3-201ENST00000315571 IGKV1-39P01597 117 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms