RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 H0YJW9 148 aa14.11□□□□□ -0.15
GABRB3-202ENST00000311550 AREGP15514 252 aa14.11□□□□□ -0.15
GABRB3-202ENST00000311550 ZNF56Q15929 161 aa14.11□□□□□ -0.15
GABRB3-202ENST00000311550 OR10J3Q5JRS4 329 aa14.11□□□□□ -0.15
GABRB3-202ENST00000311550 PVRIGQ6DKI7 326 aa14.11□□□□□ -0.15
GABRB3-202ENST00000311550 FAM159AQ6UWV7 190 aa14.11□□□□□ -0.15
GABRB3-202ENST00000311550 C8orf46Q8TAG6 207 aa14.11□□□□□ -0.15
GABRB3-202ENST00000311550 FOXC2Q99958 501 aa14.11□□□□□ -0.15
GABRB3-202ENST00000311550 PSG1P11464 419 aa14.1□□□□□ -0.15
GABRB3-202ENST00000311550 IGLV3-1P01715 115 aa14.1□□□□□ -0.15
GABRB3-202ENST00000311550 LINC00614P0C842 121 aa14.1□□□□□ -0.15
GABRB3-202ENST00000311550 PMS2P5A8MQ11 134 aa14.1□□□□□ -0.15
GABRB3-202ENST00000311550 CCL19Q99731 98 aa14.1□□□□□ -0.15
GABRB3-202ENST00000311550 TMEM238LA0A1B0GVL6 79 aa14.1□□□□□ -0.15
GABRB3-202ENST00000311550 A6NJY4 79 aa14.1□□□□□ -0.15
GABRB3-202ENST00000311550 ZNF726P1Q15940 193 aa14.1□□□□□ -0.15
GABRB3-202ENST00000311550 Q6AWC8 147 aa14.1□□□□□ -0.15
GABRB3-202ENST00000311550 SHANK1Q9Y566 2161 aa14.1□□□□□ -0.15
GABRB3-202ENST00000311550 A6NNC1 897 aa14.09□□□□□ -0.15
GABRB3-202ENST00000311550 KLF17Q5JT82 389 aaPredicted RBP14.09□□□□□ -0.15
GABRB3-202ENST00000311550 KIAA1671Q9BY89 1806 aa14.09□□□□□ -0.15
GABRB3-202ENST00000311550 MBD3L4A6NDZ8 208 aaPredicted RBP14.09□□□□□ -0.15
GABRB3-202ENST00000311550 MBD3L3A6NE82 208 aaPredicted RBP14.09□□□□□ -0.15
GABRB3-202ENST00000311550 MBD3L5A6NJ08 208 aaPredicted RBP14.09□□□□□ -0.15
GABRB3-202ENST00000311550 WNT2P09544 360 aa14.09□□□□□ -0.15
GABRB3-202ENST00000311550 SLC25A48Q6ZT89 311 aaKnown RBP14.09□□□□□ -0.15
GABRB3-202ENST00000311550 MBD3L2Q8NHZ7 208 aaPredicted RBP14.09□□□□□ -0.15
GABRB3-202ENST00000311550 Q6ZR03 302 aa14.09□□□□□ -0.15
GABRB3-202ENST00000311550 SPACA3Q8IXA5 215 aa14.09□□□□□ -0.15
GABRB3-202ENST00000311550 A0A0G2JNJ9 132 aa14.08□□□□□ -0.15
GABRB3-202ENST00000311550 ZNF672Q499Z4 452 aaPredicted RBP14.08□□□□□ -0.15
GABRB3-202ENST00000311550 LYPD2Q6UXB3 125 aa14.08□□□□□ -0.15
GABRB3-202ENST00000311550 TMEM167AQ8TBQ9 72 aa14.08□□□□□ -0.15
GABRB3-202ENST00000311550 LINC00479Q96M42 142 aa14.08□□□□□ -0.15
GABRB3-202ENST00000311550 Q9UFV3 132 aa14.08□□□□□ -0.15
GABRB3-202ENST00000311550 USF3Q68DE3 2245 aa14.08□□□□□ -0.16
GABRB3-202ENST00000311550 TRAV9-2A0A087WT02 112 aa14.08□□□□□ -0.16
GABRB3-202ENST00000311550 IL15RAQ13261 267 aa14.08□□□□□ -0.16
GABRB3-202ENST00000311550 C10orf91Q5T1B1 145 aa14.08□□□□□ -0.16
GABRB3-202ENST00000311550 PEF1Q9UBV8 284 aaKnown RBP14.08□□□□□ -0.16
GABRB3-202ENST00000311550 COL4A3Q01955 1670 aa14.08□□□□□ -0.16
GABRB3-202ENST00000311550 PRSS2P07478 247 aa14.08□□□□□ -0.16
GABRB3-202ENST00000311550 KLRD1Q13241 179 aa14.08□□□□□ -0.16
GABRB3-202ENST00000311550 RPRMLQ8N4K4 120 aa14.08□□□□□ -0.16
GABRB3-202ENST00000311550 RAXQ9Y2V3 346 aa14.08□□□□□ -0.16
GABRB3-202ENST00000311550 A0A1B0GUS0 222 aa14.07□□□□□ -0.16
GABRB3-202ENST00000311550 A0A1B0GW15 77 aa14.07□□□□□ -0.16
GABRB3-202ENST00000311550 OR11H12B2RN74 326 aa14.07□□□□□ -0.16
GABRB3-202ENST00000311550 OR11H1Q8NG94 326 aa14.07□□□□□ -0.16
GABRB3-202ENST00000311550 OR11H2Q8NH07 326 aa14.07□□□□□ -0.16
GABRB3-202ENST00000311550 IGHV1-3A0A0C4DH29 117 aa14.07□□□□□ -0.16
GABRB3-202ENST00000311550 FAM71F2Q6NXP2 309 aa14.07□□□□□ -0.16
GABRB3-202ENST00000311550 KIR2DL4Q99706 377 aa14.07□□□□□ -0.16
GABRB3-202ENST00000311550 RHOGP84095 191 aa14.07□□□□□ -0.16
GABRB3-202ENST00000311550 YLPM1P49750 1951 aaKnown RBP14.07□□□□□ -0.16
GABRB3-202ENST00000311550 NDUFS6O75380 124 aaKnown RBP14.07□□□□□ -0.16
GABRB3-202ENST00000311550 LINC00527Q9UJ94 153 aa14.07□□□□□ -0.16
GABRB3-202ENST00000311550 COX6B1P14854 86 aa14.07□□□□□ -0.16
GABRB3-202ENST00000311550 GLMPQ8WWB7 406 aa14.07□□□□□ -0.16
GABRB3-202ENST00000311550 TRAV8-1A0A0A6YYK1 113 aa14.06□□□□□ -0.16
GABRB3-202ENST00000311550 FABP5P3A8MUU1 101 aa14.06□□□□□ -0.16
GABRB3-202ENST00000311550 CRXO43186 299 aaPredicted RBP14.06□□□□□ -0.16
GABRB3-202ENST00000311550 RNASE2P10153 161 aaKnown RBP14.06□□□□□ -0.16
GABRB3-202ENST00000311550 ASIPP42127 132 aa14.06□□□□□ -0.16
GABRB3-202ENST00000311550 PCP4P48539 62 aa14.06□□□□□ -0.16
GABRB3-202ENST00000311550 DDB2Q92466 427 aa14.06□□□□□ -0.16
GABRB3-202ENST00000311550 VKORC1Q9BQB6 163 aa14.06□□□□□ -0.16
GABRB3-202ENST00000311550 LCN12Q6JVE5 192 aa14.06□□□□□ -0.16
GABRB3-202ENST00000311550 SLC25A39Q9BZJ4 359 aaPredicted RBP14.06□□□□□ -0.16
GABRB3-202ENST00000311550 LEPP41159 167 aa14.06□□□□□ -0.16
GABRB3-202ENST00000311550 DUX4L9Q6RFH8 374 aaPredicted RBP14.06□□□□□ -0.16
GABRB3-202ENST00000311550 NEUROG1Q92886 237 aa14.06□□□□□ -0.16
GABRB3-202ENST00000311550 NPIPB5A8MRT5 1133 aa14.05□□□□□ -0.16
GABRB3-202ENST00000311550 TNFSF13O75888 250 aa14.05□□□□□ -0.16
GABRB3-202ENST00000311550 SNCGO76070 127 aa14.05□□□□□ -0.16
GABRB3-202ENST00000311550 SLX1AQ9BQ83 275 aa14.05□□□□□ -0.16
GABRB3-202ENST00000311550 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.05□□□□□ -0.16
GABRB3-202ENST00000311550 SMIM13P0DJ93 91 aa14.05□□□□□ -0.16
GABRB3-202ENST00000311550 LGALS3P17931 250 aaKnown RBP14.05□□□□□ -0.16
GABRB3-202ENST00000311550 LMO1P25800 156 aa14.05□□□□□ -0.16
GABRB3-202ENST00000311550 ZNF664Q8N3J9 261 aa14.05□□□□□ -0.16
GABRB3-202ENST00000311550 THBDP07204 575 aa14.05□□□□□ -0.16
GABRB3-202ENST00000311550 TNFRSF14Q92956 283 aa14.05□□□□□ -0.16
GABRB3-202ENST00000311550 LY6HO94772 140 aa14.05□□□□□ -0.16
GABRB3-202ENST00000311550 IGKV2-40A0A087WW87 121 aaPredicted RBP14.05□□□□□ -0.16
GABRB3-202ENST00000311550 IGKV2D-40P01614 121 aaPredicted RBP14.05□□□□□ -0.16
GABRB3-202ENST00000311550 TCRAP04437 139 aa14.05□□□□□ -0.16
GABRB3-202ENST00000311550 ADIPOQQ15848 244 aa14.05□□□□□ -0.16
GABRB3-202ENST00000311550 RNASE4P34096 147 aaKnown RBP14.04□□□□□ -0.16
GABRB3-202ENST00000311550 RPL15P61313 204 aaKnown RBP14.04□□□□□ -0.16
GABRB3-202ENST00000311550 SNRPD3P62318 126 aaKnown RBP14.04□□□□□ -0.16
GABRB3-202ENST00000311550 HAPLN4Q86UW8 402 aa14.04□□□□□ -0.16
GABRB3-202ENST00000311550 NUP35Q8NFH5 326 aa14.04□□□□□ -0.16
GABRB3-202ENST00000311550 SCGB3A1Q96QR1 104 aa14.04□□□□□ -0.16
GABRB3-202ENST00000311550 NUP210Q8TEM1 1887 aaPredicted RBP14.04□□□□□ -0.16
GABRB3-202ENST00000311550 NPIPB6E9PJ23 425 aa14.04□□□□□ -0.16
GABRB3-202ENST00000311550 TMEM170BQ5T4T1 132 aa14.04□□□□□ -0.16
GABRB3-202ENST00000311550 ASCL2Q99929 193 aa14.04□□□□□ -0.16
GABRB3-202ENST00000311550 PFN1P07737 140 aaKnown RBP14.04□□□□□ -0.16
GABRB3-202ENST00000311550 EVI2AP22794 236 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms