RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 NCR2O95944 276 aa12.9□□□□□ -0.34
USP43-201ENST00000285199 AREGP15514 252 aa12.9□□□□□ -0.34
USP43-201ENST00000285199 YPEL2Q96QA6 119 aa12.9□□□□□ -0.34
USP43-201ENST00000285199 COX11Q9Y6N1 276 aa12.9□□□□□ -0.34
USP43-201ENST00000285199 TRBV20OR9-2A0A075B6H5 130 aa12.9□□□□□ -0.34
USP43-201ENST00000285199 DLX1P56177 255 aa12.9□□□□□ -0.34
USP43-201ENST00000285199 LOXL3P58215 753 aa12.9□□□□□ -0.34
USP43-201ENST00000285199 C19orf24Q9BVV8 132 aa12.9□□□□□ -0.34
USP43-201ENST00000285199 Q6ZPA2 131 aa12.9□□□□□ -0.34
USP43-201ENST00000285199 ANKHD1Q8IWZ3 2542 aaKnown RBP12.9□□□□□ -0.34
USP43-201ENST00000285199 C16orf97H3BN30 126 aa12.89□□□□□ -0.35
USP43-201ENST00000285199 CEACAM8P31997 349 aaPredicted RBP12.89□□□□□ -0.35
USP43-201ENST00000285199 Q6ZS49 121 aa12.89□□□□□ -0.35
USP43-201ENST00000285199 COLCA1Q6ZS62 124 aa12.89□□□□□ -0.35
USP43-201ENST00000285199 LYNX1G3V0Z9 82 aa12.89□□□□□ -0.35
USP43-201ENST00000285199 K7EN84 100 aa12.89□□□□□ -0.35
USP43-201ENST00000285199 LYNX1P0DP58 116 aa12.89□□□□□ -0.35
USP43-201ENST00000285199 COL8A2P25067 703 aa12.89□□□□□ -0.35
USP43-201ENST00000285199 TANC2Q9HCD6 1990 aa12.89□□□□□ -0.35
USP43-201ENST00000285199 GAGE12BA1L429 117 aa12.89□□□□□ -0.35
USP43-201ENST00000285199 OR4A5Q8NH83 315 aa12.89□□□□□ -0.35
USP43-201ENST00000285199 FRMPD3Q5JV73 1810 aa12.89□□□□□ -0.35
USP43-201ENST00000285199 IGKV3D-15A0A087WSY6 115 aa12.88□□□□□ -0.35
USP43-201ENST00000285199 SRSF7Q16629 238 aaKnown RBP eCLIP12.88□□□□□ -0.35
USP43-201ENST00000285199 DUX4L9Q6RFH8 374 aaPredicted RBP12.88□□□□□ -0.35
USP43-201ENST00000285199 GGTLC3B5MD39 225 aa12.88□□□□□ -0.35
USP43-201ENST00000285199 EVI2AP22794 236 aa12.88□□□□□ -0.35
USP43-201ENST00000285199 ZFP36L1Q07352 338 aaKnown RBP12.88□□□□□ -0.35
USP43-201ENST00000285199 OR2K2Q8NGT1 345 aa12.88□□□□□ -0.35
USP43-201ENST00000285199 NOTCH2Q04721 2471 aa12.88□□□□□ -0.35
USP43-201ENST00000285199 ETV2O00321 342 aaPredicted RBP12.88□□□□□ -0.35
USP43-201ENST00000285199 WDR31Q8NA23 367 aa12.88□□□□□ -0.35
USP43-201ENST00000285199 FOXC2Q99958 501 aa12.88□□□□□ -0.35
USP43-201ENST00000285199 C9JCJ5 164 aa12.88□□□□□ -0.35
USP43-201ENST00000285199 GUSBP1Q15486 140 aa12.88□□□□□ -0.35
USP43-201ENST00000285199 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.88□□□□□ -0.35
USP43-201ENST00000285199 MTURNQ8N3F0 131 aa12.88□□□□□ -0.35
USP43-201ENST00000285199 RNASE8Q8TDE3 154 aaKnown RBP12.88□□□□□ -0.35
USP43-201ENST00000285199 PRCDQ00LT1 54 aa12.87□□□□□ -0.35
USP43-201ENST00000285199 FAM90A1Q86YD7 464 aa12.87□□□□□ -0.35
USP43-201ENST00000285199 MBNL3Q9NUK0 354 aaKnown RBP12.87□□□□□ -0.35
USP43-201ENST00000285199 SMIM13P0DJ93 91 aa12.87□□□□□ -0.35
USP43-201ENST00000285199 RPL15P61313 204 aaKnown RBP12.87□□□□□ -0.35
USP43-201ENST00000285199 KLF17Q5JT82 389 aaPredicted RBP12.87□□□□□ -0.35
USP43-201ENST00000285199 ZNF418Q8TF45 676 aaPredicted RBP12.87□□□□□ -0.35
USP43-201ENST00000285199 SMIM12Q96EX1 92 aa12.87□□□□□ -0.35
USP43-201ENST00000285199 MC5RP33032 325 aa12.87□□□□□ -0.35
USP43-201ENST00000285199 VWC2Q2TAL6 325 aa12.87□□□□□ -0.35
USP43-201ENST00000285199 OSR1Q8TAX0 266 aaPredicted RBP12.87□□□□□ -0.35
USP43-201ENST00000285199 RAB1CQ92928 201 aa12.87□□□□□ -0.35
USP43-201ENST00000285199 GP6Q9HCN6 339 aa12.87□□□□□ -0.35
USP43-201ENST00000285199 V9GYV3 84 aa12.87□□□□□ -0.35
USP43-201ENST00000285199 MYO9AB2RTY4 2548 aa12.86□□□□□ -0.35
USP43-201ENST00000285199 SYS1-DBNDD2H3BUS1 97 aa12.86□□□□□ -0.35
USP43-201ENST00000285199 M0R3E3 92 aa12.86□□□□□ -0.35
USP43-201ENST00000285199 IGFL4Q6B9Z1 124 aa12.86□□□□□ -0.35
USP43-201ENST00000285199 MAP1LC3AQ9H492 121 aa12.86□□□□□ -0.35
USP43-201ENST00000285199 IGKV1D-17A0A075B6S4 117 aa12.86□□□□□ -0.35
USP43-201ENST00000285199 CCL25O15444 150 aa12.86□□□□□ -0.35
USP43-201ENST00000285199 GLRXP35754 106 aa12.86□□□□□ -0.35
USP43-201ENST00000285199 YPEL3P61236 119 aaPredicted RBP12.86□□□□□ -0.35
USP43-201ENST00000285199 RNFT1Q5M7Z0 435 aa12.86□□□□□ -0.35
USP43-201ENST00000285199 PNKDQ8N490 385 aa12.86□□□□□ -0.35
USP43-201ENST00000285199 FAM169BQ8N8A8 192 aa12.86□□□□□ -0.35
USP43-201ENST00000285199 SMKR1H3BMG3 65 aa12.86□□□□□ -0.35
USP43-201ENST00000285199 MYO18BQ8IUG5 2567 aa12.86□□□□□ -0.35
USP43-201ENST00000285199 SORL1Q92673 2214 aa12.86□□□□□ -0.35
USP43-201ENST00000285199 TRBV6-6A0A0A6YYG2 114 aa12.85□□□□□ -0.35
USP43-201ENST00000285199 PMS2P5A8MQ11 134 aa12.85□□□□□ -0.35
USP43-201ENST00000285199 LCNL1Q6ZST4 164 aa12.85□□□□□ -0.35
USP43-201ENST00000285199 ODF3L1Q8IXM7 274 aa12.85□□□□□ -0.35
USP43-201ENST00000285199 GTSF1LQ9H1H1 148 aa12.85□□□□□ -0.35
USP43-201ENST00000285199 A0A1B0GWB2 263 aa12.85□□□□□ -0.35
USP43-201ENST00000285199 NPIPB5A8MRT5 1133 aa12.85□□□□□ -0.35
USP43-201ENST00000285199 NPIPB11E5RHQ5 1161 aa12.85□□□□□ -0.35
USP43-201ENST00000285199 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.85□□□□□ -0.35
USP43-201ENST00000285199 CRYABP02511 175 aaKnown RBP12.85□□□□□ -0.35
USP43-201ENST00000285199 IGHV1-18A0A0C4DH31 117 aa12.85□□□□□ -0.35
USP43-201ENST00000285199 ZNF134P52741 427 aa12.85□□□□□ -0.35
USP43-201ENST00000285199 Q0VG73 95 aa12.85□□□□□ -0.35
USP43-201ENST00000285199 TEX45Q8NA69 505 aa12.85□□□□□ -0.35
USP43-201ENST00000285199 PYGO2Q9BRQ0 406 aa12.85□□□□□ -0.35
USP43-201ENST00000285199 A0A1B0GWJ7 208 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 NDUFA3O95167 84 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 SRSF6Q13247 344 aaKnown RBP12.84□□□□□ -0.35
USP43-201ENST00000285199 KHDC1LQ5JSQ8 128 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 C1orf185Q5T7R7 199 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 PRSS57Q6UWY2 283 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 ZNF788Q6ZQV5 615 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 ORAOV1Q8WV07 137 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 CACNG8Q8WXS5 425 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 APOMO95445 188 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 CRIP3Q6Q6R5 217 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 BEX4Q9NWD9 120 aaPredicted RBP12.84□□□□□ -0.35
USP43-201ENST00000285199 TP73-AS1Q9UF72 201 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 PRUNE2Q8WUY3 3088 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 SETD2Q9BYW2 2564 aaPredicted RBP12.84□□□□□ -0.35
USP43-201ENST00000285199 NACAE9PAV3 2078 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 IGHV1-69-2A0A0G2JMI3 117 aa12.84□□□□□ -0.35
USP43-201ENST00000285199 TDGF1P13385 188 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms