RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ZNF502Q8TBZ5 544 aa13.65□□□□□ -0.22
PHRF1-201ENST00000264555 MYO7BQ6PIF6 2116 aa13.65□□□□□ -0.22
PHRF1-201ENST00000264555 FABP5P3A8MUU1 101 aa13.65□□□□□ -0.22
PHRF1-201ENST00000264555 ASIPP42127 132 aa13.65□□□□□ -0.22
PHRF1-201ENST00000264555 SMAGPQ0VAQ4 97 aa13.65□□□□□ -0.22
PHRF1-201ENST00000264555 A1L4Q6 167 aa13.65□□□□□ -0.23
PHRF1-201ENST00000264555 C9JQL5 133 aa13.65□□□□□ -0.23
PHRF1-201ENST00000264555 NPIPB6E9PJ23 425 aa13.64□□□□□ -0.23
PHRF1-201ENST00000264555 KRTAP27-1Q3LI81 207 aa13.64□□□□□ -0.23
PHRF1-201ENST00000264555 FAM90A2PQ658T7 463 aa13.64□□□□□ -0.23
PHRF1-201ENST00000264555 ASCL2Q99929 193 aa13.64□□□□□ -0.23
PHRF1-201ENST00000264555 IL15RAQ13261 267 aa13.64□□□□□ -0.23
PHRF1-201ENST00000264555 KLRD1Q13241 179 aa13.64□□□□□ -0.23
PHRF1-201ENST00000264555 SAMD13Q5VXD3 122 aa13.64□□□□□ -0.23
PHRF1-201ENST00000264555 ORMDL3Q8N138 153 aa13.64□□□□□ -0.23
PHRF1-201ENST00000264555 FAM19A2Q8N3H0 131 aa13.64□□□□□ -0.23
PHRF1-201ENST00000264555 IGHV3-11P01762 117 aa13.64□□□□□ -0.23
PHRF1-201ENST00000264555 TMEM155Q4W5P6 130 aa13.63□□□□□ -0.23
PHRF1-201ENST00000264555 PMCHL2Q9BQD1 86 aa13.63□□□□□ -0.23
PHRF1-201ENST00000264555 SLC25A39Q9BZJ4 359 aaPredicted RBP13.63□□□□□ -0.23
PHRF1-201ENST00000264555 TMEM14BQ9NUH8 114 aa13.63□□□□□ -0.23
PHRF1-201ENST00000264555 FAM215AQ9Y5M1 114 aa13.63□□□□□ -0.23
PHRF1-201ENST00000264555 C5orf64Q2M2E5 130 aa13.63□□□□□ -0.23
PHRF1-201ENST00000264555 NRN1Q9NPD7 142 aa13.63□□□□□ -0.23
PHRF1-201ENST00000264555 IGLV3-9A0A075B6K5 115 aa13.63□□□□□ -0.23
PHRF1-201ENST00000264555 OR10J3Q5JRS4 329 aa13.63□□□□□ -0.23
PHRF1-201ENST00000264555 SSBP4Q9BWG4 385 aaPredicted RBP13.63□□□□□ -0.23
PHRF1-201ENST00000264555 CACNA1GO43497 2377 aa13.63□□□□□ -0.23
PHRF1-201ENST00000264555 MUC21A0A0G2JKD1 596 aa13.63□□□□□ -0.23
PHRF1-201ENST00000264555 MUC21A0A140T8X8 626 aa13.63□□□□□ -0.23
PHRF1-201ENST00000264555 PSMB2P49721 201 aa13.63□□□□□ -0.23
PHRF1-201ENST00000264555 PRR30Q53SZ7 412 aaPredicted RBP13.63□□□□□ -0.23
PHRF1-201ENST00000264555 MUC21Q5SSG8 566 aa13.63□□□□□ -0.23
PHRF1-201ENST00000264555 HIST3H2BBQ8N257 126 aa13.63□□□□□ -0.23
PHRF1-201ENST00000264555 NUDT10Q8NFP7 164 aa13.63□□□□□ -0.23
PHRF1-201ENST00000264555 NUDT11Q96G61 164 aa13.63□□□□□ -0.23
PHRF1-201ENST00000264555 KIR2DL4Q99706 377 aa13.63□□□□□ -0.23
PHRF1-201ENST00000264555 HIST1H2BLQ99880 126 aa13.63□□□□□ -0.23
PHRF1-201ENST00000264555 ATP5L2Q7Z4Y8 100 aa13.62□□□□□ -0.23
PHRF1-201ENST00000264555 ZNF414Q96IQ9 312 aa13.62□□□□□ -0.23
PHRF1-201ENST00000264555 C15orf65H3BRN8 121 aa13.62□□□□□ -0.23
PHRF1-201ENST00000264555 OR1N2Q8NGR9 330 aa13.62□□□□□ -0.23
PHRF1-201ENST00000264555 M0R381 172 aa13.62□□□□□ -0.23
PHRF1-201ENST00000264555 PPP1R17O96001 155 aa13.62□□□□□ -0.23
PHRF1-201ENST00000264555 C17orf58Q2M2W7 97 aa13.62□□□□□ -0.23
PHRF1-201ENST00000264555 M0R3E3 92 aa13.62□□□□□ -0.23
PHRF1-201ENST00000264555 IGKV3-20P01619 116 aa13.61□□□□□ -0.23
PHRF1-201ENST00000264555 PMS2P5A8MQ11 134 aa13.61□□□□□ -0.23
PHRF1-201ENST00000264555 CA1P00915 261 aaPredicted RBP13.61□□□□□ -0.23
PHRF1-201ENST00000264555 ZNF318Q5VUA4 2279 aa13.61□□□□□ -0.23
PHRF1-201ENST00000264555 FAM74A4Q5TZK3 123 aa13.61□□□□□ -0.23
PHRF1-201ENST00000264555 SCRT1Q9BWW7 348 aa13.61□□□□□ -0.23
PHRF1-201ENST00000264555 MOB4Q9Y3A3 225 aa13.61□□□□□ -0.23
PHRF1-201ENST00000264555 DOCK7Q96N67 2140 aa13.61□□□□□ -0.23
PHRF1-201ENST00000264555 TEX36Q5VZQ5 186 aa13.61□□□□□ -0.23
PHRF1-201ENST00000264555 TRAV40A0A0B4J280 105 aa13.6□□□□□ -0.23
PHRF1-201ENST00000264555 PAX1P15863 534 aa13.6□□□□□ -0.23
PHRF1-201ENST00000264555 JOSD1Q15040 202 aaPredicted RBP13.6□□□□□ -0.23
PHRF1-201ENST00000264555 LHFPL4Q7Z7J7 247 aa13.6□□□□□ -0.23
PHRF1-201ENST00000264555 KLK15Q9H2R5 256 aa13.6□□□□□ -0.23
PHRF1-201ENST00000264555 SRCAPQ6ZRS2 3230 aa13.6□□□□□ -0.23
PHRF1-201ENST00000264555 ZNF56Q15929 161 aa13.6□□□□□ -0.23
PHRF1-201ENST00000264555 SRSF8Q9BRL6 282 aaKnown RBP13.6□□□□□ -0.23
PHRF1-201ENST00000264555 C7orf71A4D174 169 aa13.6□□□□□ -0.23
PHRF1-201ENST00000264555 IGFL2Q6UWQ7 119 aa13.6□□□□□ -0.23
PHRF1-201ENST00000264555 DCAF16Q9NXF7 216 aa13.6□□□□□ -0.23
PHRF1-201ENST00000264555 TMEM238LA0A1B0GVL6 79 aa13.6□□□□□ -0.23
PHRF1-201ENST00000264555 A6NJY4 79 aa13.6□□□□□ -0.23
PHRF1-201ENST00000264555 TCRAP04437 139 aa13.6□□□□□ -0.23
PHRF1-201ENST00000264555 CTAG1AP78358 180 aa13.6□□□□□ -0.23
PHRF1-201ENST00000264555 RPL24P83731 157 aaKnown RBP13.6□□□□□ -0.23
PHRF1-201ENST00000264555 C15orf32Q32M92 178 aa13.6□□□□□ -0.23
PHRF1-201ENST00000264555 CYB5R2Q6BCY4 276 aa13.6□□□□□ -0.23
PHRF1-201ENST00000264555 BEND2Q8NDZ0 799 aa13.6□□□□□ -0.23
PHRF1-201ENST00000264555 TRAV41A0A0B4J266 112 aa13.59□□□□□ -0.23
PHRF1-201ENST00000264555 ZNF324O75467 553 aaPredicted RBP13.59□□□□□ -0.23
PHRF1-201ENST00000264555 UQCRFS1P47985 274 aa13.59□□□□□ -0.23
PHRF1-201ENST00000264555 MLANAQ16655 118 aa13.59□□□□□ -0.23
PHRF1-201ENST00000264555 ZNF833PQ6ZTB9 187 aa13.59□□□□□ -0.23
PHRF1-201ENST00000264555 ZNRD1Q9P1U0 126 aa13.59□□□□□ -0.23
PHRF1-201ENST00000264555 IGHV3OR16-12A0A075B7B8 117 aa13.59□□□□□ -0.23
PHRF1-201ENST00000264555 GNLYP22749 145 aa13.59□□□□□ -0.23
PHRF1-201ENST00000264555 PRTN3P24158 256 aa13.59□□□□□ -0.23
PHRF1-201ENST00000264555 DSCR9P59020 149 aa13.59□□□□□ -0.23
PHRF1-201ENST00000264555 CEACAM4O75871 244 aa13.59□□□□□ -0.23
PHRF1-201ENST00000264555 SPTBN1Q01082 2364 aaKnown RBP13.59□□□□□ -0.23
PHRF1-201ENST00000264555 TCF21O43680 179 aa13.59□□□□□ -0.23
PHRF1-201ENST00000264555 VDAC2P45880 294 aaPredicted RBP13.59□□□□□ -0.23
PHRF1-201ENST00000264555 PAX8Q06710 450 aa13.59□□□□□ -0.23
PHRF1-201ENST00000264555 PRDM13Q9H4Q3 707 aa13.59□□□□□ -0.23
PHRF1-201ENST00000264555 POLEQ07864 2286 aa13.59□□□□□ -0.23
PHRF1-201ENST00000264555 RRN3P1Q2M238 152 aa13.59□□□□□ -0.23
PHRF1-201ENST00000264555 GFI1BQ5VTD9 330 aa13.59□□□□□ -0.23
PHRF1-201ENST00000264555 NPFFR1Q9GZQ6 430 aa13.59□□□□□ -0.23
PHRF1-201ENST00000264555 PKDREJQ9NTG1 2253 aa13.58□□□□□ -0.24
PHRF1-201ENST00000264555 HAX1O00165 279 aa13.58□□□□□ -0.24
PHRF1-201ENST00000264555 ATP5LO75964 103 aa13.58□□□□□ -0.24
PHRF1-201ENST00000264555 ACTL10Q5JWF8 245 aa13.58□□□□□ -0.24
PHRF1-201ENST00000264555 RASL11AQ6T310 242 aa13.58□□□□□ -0.24
PHRF1-201ENST00000264555 UNQ6494/PRO21346Q6UXR6 183 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms