RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 PF4V1P10720 104 aa10.74□□□□□ -0.69
PPP4R3B-206ENST00000616407 SRIP30626 198 aa10.74□□□□□ -0.69
PPP4R3B-206ENST00000616407 MAS1LP35410 378 aa10.74□□□□□ -0.69
PPP4R3B-206ENST00000616407 TCF23Q7RTU1 214 aa10.74□□□□□ -0.69
PPP4R3B-206ENST00000616407 LINC01551Q86U37 167 aa10.74□□□□□ -0.69
PPP4R3B-206ENST00000616407 TBX15Q96SF7 602 aa10.74□□□□□ -0.69
PPP4R3B-206ENST00000616407 SLX1AQ9BQ83 275 aa10.74□□□□□ -0.69
PPP4R3B-206ENST00000616407 C21orf62Q9NYP8 219 aa10.74□□□□□ -0.69
PPP4R3B-206ENST00000616407 PRRC2CQ9Y520 2896 aaKnown RBP10.74□□□□□ -0.69
PPP4R3B-206ENST00000616407 GNG5P63218 68 aa10.74□□□□□ -0.69
PPP4R3B-206ENST00000616407 SCGB2A2Q13296 93 aa10.74□□□□□ -0.69
PPP4R3B-206ENST00000616407 TRBV24-1A0A075B6N3 115 aa10.74□□□□□ -0.69
PPP4R3B-206ENST00000616407 RPL7P18124 248 aaKnown RBP10.74□□□□□ -0.69
PPP4R3B-206ENST00000616407 TMEM155Q4W5P6 130 aa10.74□□□□□ -0.69
PPP4R3B-206ENST00000616407 OR5R1Q8NH85 324 aa10.74□□□□□ -0.69
PPP4R3B-206ENST00000616407 RABAC1Q9UI14 185 aa10.74□□□□□ -0.69
PPP4R3B-206ENST00000616407 FBXL7Q9UJT9 491 aa10.74□□□□□ -0.69
PPP4R3B-206ENST00000616407 C5orf52A6NGY3 159 aa10.73□□□□□ -0.69
PPP4R3B-206ENST00000616407 LOXP28300 417 aaPredicted RBP10.73□□□□□ -0.69
PPP4R3B-206ENST00000616407 TEX38Q6PEX7 206 aa10.73□□□□□ -0.69
PPP4R3B-206ENST00000616407 CCL19Q99731 98 aa10.73□□□□□ -0.69
PPP4R3B-206ENST00000616407 PAM16Q9Y3D7 125 aa10.73□□□□□ -0.69
PPP4R3B-206ENST00000616407 CGB1A6NKQ9 187 aa10.73□□□□□ -0.69
PPP4R3B-206ENST00000616407 BUB1B-PAK6H3BSN5 160 aa10.73□□□□□ -0.69
PPP4R3B-206ENST00000616407 C1QL4Q86Z23 238 aa10.73□□□□□ -0.69
PPP4R3B-206ENST00000616407 LYPD6BQ8NI32 183 aa10.73□□□□□ -0.69
PPP4R3B-206ENST00000616407 M0QZ24 198 aa10.73□□□□□ -0.69
PPP4R3B-206ENST00000616407 AMY1AP04745 511 aa10.73□□□□□ -0.69
PPP4R3B-206ENST00000616407 PKIAP61925 76 aa10.73□□□□□ -0.69
PPP4R3B-206ENST00000616407 PAFAH1B2P68402 229 aa10.73□□□□□ -0.69
PPP4R3B-206ENST00000616407 ATRXP46100 2492 aa10.73□□□□□ -0.69
PPP4R3B-206ENST00000616407 LHBP01229 141 aa10.72□□□□□ -0.69
PPP4R3B-206ENST00000616407 GSX1Q9H4S2 264 aaPredicted RBP10.72□□□□□ -0.69
PPP4R3B-206ENST00000616407 YTHDF2Q9Y5A9 579 aaKnown RBP10.72□□□□□ -0.69
PPP4R3B-206ENST00000616407 AREGP15514 252 aa10.72□□□□□ -0.69
PPP4R3B-206ENST00000616407 TAS2R60P59551 318 aa10.72□□□□□ -0.69
PPP4R3B-206ENST00000616407 SIGLEC9Q9Y336 463 aa10.72□□□□□ -0.69
PPP4R3B-206ENST00000616407 IGHV3-49A0A0A0MS15 119 aa10.72□□□□□ -0.69
PPP4R3B-206ENST00000616407 SRRM4A7MD48 611 aaKnown RBP10.72□□□□□ -0.69
PPP4R3B-206ENST00000616407 UBE2CO00762 179 aa10.72□□□□□ -0.69
PPP4R3B-206ENST00000616407 IGLV2-14P01704 120 aa10.72□□□□□ -0.69
PPP4R3B-206ENST00000616407 ATG2AQ2TAZ0 1938 aa10.72□□□□□ -0.69
PPP4R3B-206ENST00000616407 DIAPH2-AS1Q14236 149 aa10.72□□□□□ -0.69
PPP4R3B-206ENST00000616407 Q9H3A6 140 aa10.72□□□□□ -0.69
PPP4R3B-206ENST00000616407 CD99P14209 185 aa10.71□□□□□ -0.69
PPP4R3B-206ENST00000616407 GUSBP1Q15486 140 aa10.71□□□□□ -0.69
PPP4R3B-206ENST00000616407 KLF17Q5JT82 389 aaPredicted RBP10.71□□□□□ -0.69
PPP4R3B-206ENST00000616407 GFI1BQ5VTD9 330 aa10.71□□□□□ -0.69
PPP4R3B-206ENST00000616407 PRUNE2Q8WUY3 3088 aa10.71□□□□□ -0.69
PPP4R3B-206ENST00000616407 TMEM189A5PLL7 270 aa10.71□□□□□ -0.69
PPP4R3B-206ENST00000616407 GCGP01275 180 aa10.71□□□□□ -0.69
PPP4R3B-206ENST00000616407 TPTE2P1Q5T6R2 138 aa10.71□□□□□ -0.69
PPP4R3B-206ENST00000616407 FAM168AQ92567 244 aa10.71□□□□□ -0.69
PPP4R3B-206ENST00000616407 GNLYP22749 145 aa10.71□□□□□ -0.7
PPP4R3B-206ENST00000616407 GRNP28799 593 aaKnown RBP10.71□□□□□ -0.7
PPP4R3B-206ENST00000616407 GPR183P32249 361 aa10.71□□□□□ -0.7
PPP4R3B-206ENST00000616407 OR5AN1Q8NGI8 311 aa10.71□□□□□ -0.7
PPP4R3B-206ENST00000616407 METTL26Q96S19 204 aa10.71□□□□□ -0.7
PPP4R3B-206ENST00000616407 DIRC3C9JPN6 131 aa10.7□□□□□ -0.7
PPP4R3B-206ENST00000616407 PRB4P10163 310 aaPredicted RBP10.7□□□□□ -0.7
PPP4R3B-206ENST00000616407 HNRNPA3P51991 378 aaKnown RBP10.7□□□□□ -0.7
PPP4R3B-206ENST00000616407 KIR3DL3Q8N743 410 aa10.7□□□□□ -0.7
PPP4R3B-206ENST00000616407 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.7□□□□□ -0.7
PPP4R3B-206ENST00000616407 A0A1W2PPI3 338 aa10.7□□□□□ -0.7
PPP4R3B-206ENST00000616407 COX6B1P14854 86 aa10.7□□□□□ -0.7
PPP4R3B-206ENST00000616407 ZNF833PQ6ZTB9 187 aa10.7□□□□□ -0.7
PPP4R3B-206ENST00000616407 EPDR1Q9UM22 224 aa10.7□□□□□ -0.7
PPP4R3B-206ENST00000616407 UFC1Q9Y3C8 167 aa10.7□□□□□ -0.7
PPP4R3B-206ENST00000616407 GPR82Q96P67 336 aa10.7□□□□□ -0.7
PPP4R3B-206ENST00000616407 NHLH1Q02575 133 aa10.7□□□□□ -0.7
PPP4R3B-206ENST00000616407 UNQ6494/PRO21346Q6UXR6 183 aa10.7□□□□□ -0.7
PPP4R3B-206ENST00000616407 WFDC3Q8IUB2 231 aa10.7□□□□□ -0.7
PPP4R3B-206ENST00000616407 TMEM170AQ8WVE7 144 aa10.7□□□□□ -0.7
PPP4R3B-206ENST00000616407 C5orf30Q96GV9 206 aa10.7□□□□□ -0.7
PPP4R3B-206ENST00000616407 IGHV3-66A0A0C4DH42 116 aa10.69□□□□□ -0.7
PPP4R3B-206ENST00000616407 OR2T8A6NH00 312 aa10.69□□□□□ -0.7
PPP4R3B-206ENST00000616407 ZNF207O43670 478 aaKnown RBP10.69□□□□□ -0.7
PPP4R3B-206ENST00000616407 CA1P00915 261 aaPredicted RBP10.69□□□□□ -0.7
PPP4R3B-206ENST00000616407 PSG1P11464 419 aa10.69□□□□□ -0.7
PPP4R3B-206ENST00000616407 TRBV9A0A0B4J1U6 114 aa10.69□□□□□ -0.7
PPP4R3B-206ENST00000616407 A1L4Q6 167 aa10.69□□□□□ -0.7
PPP4R3B-206ENST00000616407 CNTFRP26992 372 aa10.69□□□□□ -0.7
PPP4R3B-206ENST00000616407 RNF125Q96EQ8 232 aa10.69□□□□□ -0.7
PPP4R3B-206ENST00000616407 NDUFA4L2Q9NRX3 87 aa10.69□□□□□ -0.7
PPP4R3B-206ENST00000616407 COL4A2P08572 1712 aa10.69□□□□□ -0.7
PPP4R3B-206ENST00000616407 CDH23Q9H251 3354 aa10.69□□□□□ -0.7
PPP4R3B-206ENST00000616407 FOXA3P55318 350 aaPredicted RBP10.69□□□□□ -0.7
PPP4R3B-206ENST00000616407 ATP5G2Q06055 141 aa10.69□□□□□ -0.7
PPP4R3B-206ENST00000616407 C16orf92Q96LL3 132 aa10.69□□□□□ -0.7
PPP4R3B-206ENST00000616407 CTSZQ9UBR2 303 aa10.69□□□□□ -0.7
PPP4R3B-206ENST00000616407 TNCP24821 2201 aa10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 SHISA9B4DS77 424 aa10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 EFNA4P52798 201 aa10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 FAM71F2Q6NXP2 309 aa10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 VMO1Q7Z5L0 202 aa10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 HLA-DRB1P01911 266 aa10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 OR5AL1P0C617 328 aa10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 PSG9Q00887 426 aa10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 TMEM78Q5T7P6 136 aa10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 GSN-AS1Q9NRJ2 163 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms