RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 C3orf84H3BNL1 204 aa12.8□□□□□ -0.36
HERC3-214ENST00000601319 IFNA10P01566 189 aa12.8□□□□□ -0.36
HERC3-214ENST00000601319 YPEL3P61236 119 aaPredicted RBP12.8□□□□□ -0.36
HERC3-214ENST00000601319 GGTLC1Q9BX51 225 aa12.8□□□□□ -0.36
HERC3-214ENST00000601319 TMEM231Q9H6L2 316 aa12.8□□□□□ -0.36
HERC3-214ENST00000601319 EDA2RQ9HAV5 297 aa12.8□□□□□ -0.36
HERC3-214ENST00000601319 KMT2CQ8NEZ4 4911 aaKnown RBP12.79□□□□□ -0.36
HERC3-214ENST00000601319 IGHV3-49A0A0A0MS15 119 aa12.79□□□□□ -0.36
HERC3-214ENST00000601319 C9orf170A2RU37 121 aa12.79□□□□□ -0.36
HERC3-214ENST00000601319 OR10J1P30954 320 aa12.79□□□□□ -0.36
HERC3-214ENST00000601319 CNPY1Q3B7I2 92 aa12.79□□□□□ -0.36
HERC3-214ENST00000601319 TIGITQ495A1 244 aa12.79□□□□□ -0.36
HERC3-214ENST00000601319 MUC7Q8TAX7 377 aa12.79□□□□□ -0.36
HERC3-214ENST00000601319 ST8SIA2Q92186 375 aa12.79□□□□□ -0.36
HERC3-214ENST00000601319 LOC102724200A0A096LPH7 203 aaPredicted RBP12.78□□□□□ -0.36
HERC3-214ENST00000601319 TRAV2A0A0B4J234 112 aa12.78□□□□□ -0.36
HERC3-214ENST00000601319 MED6O75586 246 aa12.78□□□□□ -0.36
HERC3-214ENST00000601319 NPPCP23582 126 aa12.78□□□□□ -0.36
HERC3-214ENST00000601319 CRYBB3P26998 211 aa12.78□□□□□ -0.36
HERC3-214ENST00000601319 METTL26Q96S19 204 aa12.78□□□□□ -0.36
HERC3-214ENST00000601319 IGHV3OR16-13A0A075B7E8 117 aa12.77□□□□□ -0.37
HERC3-214ENST00000601319 IGHV3-74A0A0B4J1X5 117 aa12.77□□□□□ -0.37
HERC3-214ENST00000601319 A0A1W2PS18 150 aa12.77□□□□□ -0.37
HERC3-214ENST00000601319 APOHP02749 345 aaPredicted RBP12.77□□□□□ -0.37
HERC3-214ENST00000601319 CMC4P56277 68 aaPredicted RBP12.77□□□□□ -0.37
HERC3-214ENST00000601319 DHRS2Q13268 280 aa12.77□□□□□ -0.37
HERC3-214ENST00000601319 GGNBP1Q5YKI7 109 aa12.77□□□□□ -0.37
HERC3-214ENST00000601319 TCF24Q7RTU0 167 aa12.77□□□□□ -0.37
HERC3-214ENST00000601319 LYG2Q86SG7 212 aa12.77□□□□□ -0.37
HERC3-214ENST00000601319 CIB3Q96Q77 187 aaPredicted RBP12.77□□□□□ -0.37
HERC3-214ENST00000601319 CCDC32Q9BV29 185 aa12.77□□□□□ -0.37
HERC3-214ENST00000601319 UBQLN2Q9UHD9 624 aa12.77□□□□□ -0.37
HERC3-214ENST00000601319 FLVCR2Q9UPI3 526 aa12.77□□□□□ -0.37
HERC3-214ENST00000601319 LINC00854A0A1B0GVQ3 168 aa12.76□□□□□ -0.37
HERC3-214ENST00000601319 IFNA4P05014 189 aa12.76□□□□□ -0.37
HERC3-214ENST00000601319 HOXB5P09067 269 aa12.76□□□□□ -0.37
HERC3-214ENST00000601319 OR4E1P0C645 316 aa12.76□□□□□ -0.37
HERC3-214ENST00000601319 GPX4P36969 197 aaPredicted RBP12.76□□□□□ -0.37
HERC3-214ENST00000601319 PAFAH1B2P68402 229 aa12.76□□□□□ -0.37
HERC3-214ENST00000601319 COQ8AQ8NI60 647 aa12.76□□□□□ -0.37
HERC3-214ENST00000601319 Q8WTZ3 238 aa12.76□□□□□ -0.37
HERC3-214ENST00000601319 NPIPB3Q92617 1050 aa12.76□□□□□ -0.37
HERC3-214ENST00000601319 ACY3Q96HD9 319 aa12.76□□□□□ -0.37
HERC3-214ENST00000601319 NARS2Q96I59 477 aaKnown RBP12.76□□□□□ -0.37
HERC3-214ENST00000601319 RETNQ9HD89 108 aa12.76□□□□□ -0.37
HERC3-214ENST00000601319 TENM2Q9NT68 2774 aa12.75□□□□□ -0.37
HERC3-214ENST00000601319 PLA2G10O15496 165 aa12.75□□□□□ -0.37
HERC3-214ENST00000601319 LYRM1O43325 122 aa12.75□□□□□ -0.37
HERC3-214ENST00000601319 SYNGR2O43760 224 aa12.75□□□□□ -0.37
HERC3-214ENST00000601319 TOMM40O96008 361 aa12.75□□□□□ -0.37
HERC3-214ENST00000601319 APOC4P55056 127 aa12.75□□□□□ -0.37
HERC3-214ENST00000601319 U3KQE9 123 aa12.75□□□□□ -0.37
HERC3-214ENST00000601319 CSMD3Q7Z407 3707 aa12.75□□□□□ -0.37
HERC3-214ENST00000601319 KIR2DL5BA0A0G2JN68 375 aa12.74□□□□□ -0.37
HERC3-214ENST00000601319 KIR2DL5BA0A0G2JPC4 375 aa12.74□□□□□ -0.37
HERC3-214ENST00000601319 ADAP1O75689 374 aa12.74□□□□□ -0.37
HERC3-214ENST00000601319 DFFBO76075 338 aa12.74□□□□□ -0.37
HERC3-214ENST00000601319 IAPPP10997 89 aa12.74□□□□□ -0.37
HERC3-214ENST00000601319 ANXA7P20073 488 aaKnown RBP12.74□□□□□ -0.37
HERC3-214ENST00000601319 P2RY1P47900 373 aa12.74□□□□□ -0.37
HERC3-214ENST00000601319 RAB11AP62491 216 aa12.74□□□□□ -0.37
HERC3-214ENST00000601319 C4orf46Q504U0 113 aa12.74□□□□□ -0.37
HERC3-214ENST00000601319 KIR2DL5AQ8N109 375 aa12.74□□□□□ -0.37
HERC3-214ENST00000601319 LILRB2Q8N423 598 aa12.74□□□□□ -0.37
HERC3-214ENST00000601319 KIR2DL5BQ8NHK3 375 aa12.74□□□□□ -0.37
HERC3-214ENST00000601319 GRAMD2BQ96HH9 432 aa12.74□□□□□ -0.37
HERC3-214ENST00000601319 SLC35E1Q96K37 410 aa12.74□□□□□ -0.37
HERC3-214ENST00000601319 C20orf85Q9H1P6 137 aa12.74□□□□□ -0.37
HERC3-214ENST00000601319 MS4A6AQ9H2W1 248 aa12.74□□□□□ -0.37
HERC3-214ENST00000601319 MAP6D1Q9H9H5 199 aa12.74□□□□□ -0.37
HERC3-214ENST00000601319 IGHV3-66A0A0C4DH42 116 aa12.73□□□□□ -0.37
HERC3-214ENST00000601319 UBE2CO00762 179 aa12.73□□□□□ -0.37
HERC3-214ENST00000601319 HNRNPCP07910 306 aaKnown RBP eCLIP12.73□□□□□ -0.37
HERC3-214ENST00000601319 RD3LP0DJH9 198 aa12.73□□□□□ -0.37
HERC3-214ENST00000601319 RPP30P78346 268 aaKnown RBP12.73□□□□□ -0.37
HERC3-214ENST00000601319 GAMTQ14353 236 aa12.73□□□□□ -0.37
HERC3-214ENST00000601319 MITD1Q8WV92 249 aa12.73□□□□□ -0.37
HERC3-214ENST00000601319 S100ZQ8WXG8 99 aa12.73□□□□□ -0.37
HERC3-214ENST00000601319 TP53TG1Q9Y2A0 90 aa12.73□□□□□ -0.37
HERC3-214ENST00000601319 IGKV3-7A0A075B6H7 116 aa12.72□□□□□ -0.37
HERC3-214ENST00000601319 A6NHS1 94 aa12.72□□□□□ -0.37
HERC3-214ENST00000601319 PRSS46E5RG02 174 aa12.72□□□□□ -0.37
HERC3-214ENST00000601319 IFNA21P01568 189 aa12.72□□□□□ -0.37
HERC3-214ENST00000601319 IL4P05112 153 aa12.72□□□□□ -0.37
HERC3-214ENST00000601319 TFPI2P48307 235 aa12.72□□□□□ -0.37
HERC3-214ENST00000601319 ID3Q02535 119 aa12.72□□□□□ -0.37
HERC3-214ENST00000601319 USF2Q15853 346 aaPredicted RBP12.72□□□□□ -0.37
HERC3-214ENST00000601319 CASC10Q5T4H9 136 aa12.72□□□□□ -0.37
HERC3-214ENST00000601319 Q6ZWC4 215 aa12.72□□□□□ -0.37
HERC3-214ENST00000601319 GBGT1Q8N5D6 347 aa12.72□□□□□ -0.37
HERC3-214ENST00000601319 MAGT1Q9H0U3 335 aa12.72□□□□□ -0.37
HERC3-214ENST00000601319 IGKV1D-37A0A075B6S9 117 aa12.71□□□□□ -0.37
HERC3-214ENST00000601319 HELTA6NFD8 242 aa12.71□□□□□ -0.37
HERC3-214ENST00000601319 MPTX1A8MV57 137 aa12.71□□□□□ -0.37
HERC3-214ENST00000601319 FABP1P07148 127 aa12.71□□□□□ -0.37
HERC3-214ENST00000601319 PSG1P11464 419 aa12.71□□□□□ -0.37
HERC3-214ENST00000601319 LYL1P12980 280 aa12.71□□□□□ -0.37
HERC3-214ENST00000601319 NUP62P37198 522 aaPredicted RBP12.71□□□□□ -0.37
HERC3-214ENST00000601319 EIF2B2P49770 351 aaKnown RBP12.71□□□□□ -0.37
HERC3-214ENST00000601319 OR51G1Q8NGK1 321 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms