RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 KIR2DL5BQ8NHK3 375 aa17.01■□□□□ 0.31
VAPA-205ENST00000578314 SRRQ9GZT4 340 aa17.01■□□□□ 0.31
VAPA-205ENST00000578314 UBE2CO00762 179 aa17■□□□□ 0.31
VAPA-205ENST00000578314 DFFBO76075 338 aa17■□□□□ 0.31
VAPA-205ENST00000578314 IGLC1P0CG04 106 aa17■□□□□ 0.31
VAPA-205ENST00000578314 CRYBB3P26998 211 aa17■□□□□ 0.31
VAPA-205ENST00000578314 ETFRF1Q6IPR1 90 aa17■□□□□ 0.31
VAPA-205ENST00000578314 Q6ZWC4 215 aa17■□□□□ 0.31
VAPA-205ENST00000578314 OR1S2Q8NGQ3 325 aa17■□□□□ 0.31
VAPA-205ENST00000578314 DTD1Q8TEA8 209 aa17■□□□□ 0.31
VAPA-205ENST00000578314 RBKSQ9H477 322 aa17■□□□□ 0.31
VAPA-205ENST00000578314 IGKV3-7A0A075B6H7 116 aa16.99■□□□□ 0.31
VAPA-205ENST00000578314 A0A1W2PS18 150 aa16.99■□□□□ 0.31
VAPA-205ENST00000578314 PITX3O75364 302 aa16.99■□□□□ 0.31
VAPA-205ENST00000578314 TFPI2P48307 235 aa16.99■□□□□ 0.31
VAPA-205ENST00000578314 RND2P52198 227 aa16.99■□□□□ 0.31
VAPA-205ENST00000578314 YPEL3P61236 119 aaPredicted RBP16.99■□□□□ 0.31
VAPA-205ENST00000578314 GBGT1Q8N5D6 347 aa16.99■□□□□ 0.31
VAPA-205ENST00000578314 IL17DQ8TAD2 202 aa16.99■□□□□ 0.31
VAPA-205ENST00000578314 METTL26Q96S19 204 aa16.99■□□□□ 0.31
VAPA-205ENST00000578314 TMEM231Q9H6L2 316 aa16.99■□□□□ 0.31
VAPA-205ENST00000578314 TP53TG1Q9Y2A0 90 aa16.99■□□□□ 0.31
VAPA-205ENST00000578314 DNAH1Q9P2D7 4330 aa16.98■□□□□ 0.31
VAPA-205ENST00000578314 TRAV2A0A0B4J234 112 aa16.98■□□□□ 0.31
VAPA-205ENST00000578314 IGHV3-66A0A0C4DH42 116 aa16.98■□□□□ 0.31
VAPA-205ENST00000578314 IFNA10P01566 189 aa16.98■□□□□ 0.31
VAPA-205ENST00000578314 ATP5IP56385 69 aaPredicted RBP16.98■□□□□ 0.31
VAPA-205ENST00000578314 WFDC3Q8IUB2 231 aa16.98■□□□□ 0.31
VAPA-205ENST00000578314 APRG1Q8IVJ8 170 aa16.98■□□□□ 0.31
VAPA-205ENST00000578314 MS4A6AQ9H2W1 248 aa16.98■□□□□ 0.31
VAPA-205ENST00000578314 LCE6AA0A183 80 aa16.97■□□□□ 0.31
VAPA-205ENST00000578314 SFT2D2O95562 160 aa16.97■□□□□ 0.31
VAPA-205ENST00000578314 SLC25A6P12236 298 aa16.97■□□□□ 0.31
VAPA-205ENST00000578314 VAMP1P23763 118 aa16.97■□□□□ 0.31
VAPA-205ENST00000578314 OR10J1P30954 320 aa16.97■□□□□ 0.31
VAPA-205ENST00000578314 STPG3Q8N7X2 389 aa16.97■□□□□ 0.31
VAPA-205ENST00000578314 OR1S1Q8NH92 325 aa16.97■□□□□ 0.31
VAPA-205ENST00000578314 Q8WTZ3 238 aa16.97■□□□□ 0.31
VAPA-205ENST00000578314 NPIPB3Q92617 1050 aa16.97■□□□□ 0.31
VAPA-205ENST00000578314 MAP6D1Q9H9H5 199 aa16.97■□□□□ 0.31
VAPA-205ENST00000578314 PPP1R1AQ13522 171 aa16.96■□□□□ 0.31
VAPA-205ENST00000578314 BAK1Q16611 211 aa16.96■□□□□ 0.31
VAPA-205ENST00000578314 U3KQE9 123 aa16.96■□□□□ 0.31
VAPA-205ENST00000578314 DNASE2O00115 360 aaPredicted RBP16.95■□□□□ 0.3
VAPA-205ENST00000578314 SPRY2O43597 315 aa16.95■□□□□ 0.3
VAPA-205ENST00000578314 RPL35AP18077 110 aaKnown RBP16.95■□□□□ 0.3
VAPA-205ENST00000578314 RBMS2Q15434 407 aaKnown RBP16.95■□□□□ 0.3
VAPA-205ENST00000578314 ZNF124Q15973 351 aa16.95■□□□□ 0.3
VAPA-205ENST00000578314 CENPSQ8N2Z9 138 aa16.95■□□□□ 0.3
VAPA-205ENST00000578314 NAP1L6A6NFF2 107 aa16.94■□□□□ 0.3
VAPA-205ENST00000578314 P2RY1P47900 373 aa16.94■□□□□ 0.3
VAPA-205ENST00000578314 UBE2MP61081 183 aaKnown RBP16.94■□□□□ 0.3
VAPA-205ENST00000578314 RPL11P62913 178 aaKnown RBP16.94■□□□□ 0.3
VAPA-205ENST00000578314 RNF183Q96D59 192 aa16.94■□□□□ 0.3
VAPA-205ENST00000578314 ACY3Q96HD9 319 aa16.94■□□□□ 0.3
VAPA-205ENST00000578314 NARS2Q96I59 477 aaKnown RBP16.94■□□□□ 0.3
VAPA-205ENST00000578314 SDHCQ99643 169 aaPredicted RBP16.94■□□□□ 0.3
VAPA-205ENST00000578314 TMED3Q9Y3Q3 217 aa16.94■□□□□ 0.3
VAPA-205ENST00000578314 FAM90A26D6RGX4 464 aa16.93■□□□□ 0.3
VAPA-205ENST00000578314 GPX4P36969 197 aaPredicted RBP16.93■□□□□ 0.3
VAPA-205ENST00000578314 DEFB135Q30KP9 77 aa16.93■□□□□ 0.3
VAPA-205ENST00000578314 TRIQKQ629K1 86 aa16.93■□□□□ 0.3
VAPA-205ENST00000578314 TOMM40O96008 361 aa16.92■□□□□ 0.3
VAPA-205ENST00000578314 IFNA4P05014 189 aa16.92■□□□□ 0.3
VAPA-205ENST00000578314 INPP1P49441 399 aa16.92■□□□□ 0.3
VAPA-205ENST00000578314 GRAMD2BQ96HH9 432 aa16.92■□□□□ 0.3
VAPA-205ENST00000578314 CSTL1Q9H114 145 aa16.92■□□□□ 0.3
VAPA-205ENST00000578314 NDUFA13Q9P0J0 144 aa16.92■□□□□ 0.3
VAPA-205ENST00000578314 NDUFB6O95139 128 aa16.91■□□□□ 0.3
VAPA-205ENST00000578314 HNRNPCP07910 306 aaKnown RBP eCLIP16.91■□□□□ 0.32e-7■□□□□ 11
VAPA-205ENST00000578314 RD3LP0DJH9 198 aa16.91■□□□□ 0.3
VAPA-205ENST00000578314 RABAC1Q9UI14 185 aa16.91■□□□□ 0.3
VAPA-205ENST00000578314 K7EQG2 157 aa16.9■□□□□ 0.3
VAPA-205ENST00000578314 DEFB131AP59861 70 aa16.9■□□□□ 0.3
VAPA-205ENST00000578314 GAMTQ14353 236 aa16.9■□□□□ 0.3
VAPA-205ENST00000578314 USF2Q15853 346 aaPredicted RBP16.9■□□□□ 0.3
VAPA-205ENST00000578314 C16orf54Q6UWD8 224 aa16.9■□□□□ 0.3
VAPA-205ENST00000578314 FAM24BQ8N5W8 94 aa16.9■□□□□ 0.3
VAPA-205ENST00000578314 MPTX1A8MV57 137 aa16.89■□□□□ 0.29
VAPA-205ENST00000578314 MED6O75586 246 aa16.89■□□□□ 0.29
VAPA-205ENST00000578314 IL4P05112 153 aa16.89■□□□□ 0.29
VAPA-205ENST00000578314 HOXB5P09067 269 aa16.89■□□□□ 0.29
VAPA-205ENST00000578314 PSG1P11464 419 aa16.89■□□□□ 0.29
VAPA-205ENST00000578314 GGNBP1Q5YKI7 109 aa16.89■□□□□ 0.29
VAPA-205ENST00000578314 STXBP6Q8NFX7 210 aa16.89■□□□□ 0.29
VAPA-205ENST00000578314 C9orf170A2RU37 121 aa16.88■□□□□ 0.29
VAPA-205ENST00000578314 HELTA6NFD8 242 aa16.88■□□□□ 0.29
VAPA-205ENST00000578314 AP2S1P53680 142 aaPredicted RBP16.88■□□□□ 0.29
VAPA-205ENST00000578314 LYG2Q86SG7 212 aa16.88■□□□□ 0.29
VAPA-205ENST00000578314 DCANP1Q8TF63 244 aa16.88■□□□□ 0.29
VAPA-205ENST00000578314 GLMPQ8WWB7 406 aa16.88■□□□□ 0.29
VAPA-205ENST00000578314 CIB3Q96Q77 187 aaPredicted RBP16.88■□□□□ 0.29
VAPA-205ENST00000578314 C7orf50Q9BRJ6 194 aaKnown RBP16.88■□□□□ 0.29
VAPA-205ENST00000578314 IGKV1D-37A0A075B6S9 117 aa16.87■□□□□ 0.29
VAPA-205ENST00000578314 A0A0J9YWU9 116 aa16.87■□□□□ 0.29
VAPA-205ENST00000578314 CENPXA8MT69 81 aa16.87■□□□□ 0.29
VAPA-205ENST00000578314 SYNGR2O43760 224 aa16.87■□□□□ 0.29
VAPA-205ENST00000578314 IAPPP10997 89 aa16.87■□□□□ 0.29
VAPA-205ENST00000578314 BTCP35070 178 aa16.87■□□□□ 0.29
VAPA-205ENST00000578314 EIF2B2P49770 351 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms