RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 VWC2LB2RUY7 222 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 GATA2P23769 480 aaPredicted RBP7.5□□□□□ -1.21
LINC00838-201ENST00000562956 OR10J1P30954 320 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 UBE2E1P51965 193 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 RUSC1-AS1Q66K80 236 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 CCDC144NLQ6NUI1 221 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 NPBQ8NG41 125 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 SRSF12Q8WXF0 261 aaKnown RBP7.5□□□□□ -1.21
LINC00838-201ENST00000562956 KCNIP2Q9NS61 270 aa7.5□□□□□ -1.21
LINC00838-201ENST00000562956 MRPL36Q9P0J6 103 aaKnown RBP7.5□□□□□ -1.21
LINC00838-201ENST00000562956 MED13LQ71F56 2210 aa7.49□□□□□ -1.21
LINC00838-201ENST00000562956 NDUFA3O95167 84 aa7.49□□□□□ -1.21
LINC00838-201ENST00000562956 IFNA1P01562 189 aa7.49□□□□□ -1.21
LINC00838-201ENST00000562956 CD81P60033 236 aa7.49□□□□□ -1.21
LINC00838-201ENST00000562956 JOSD1Q15040 202 aaPredicted RBP7.49□□□□□ -1.21
LINC00838-201ENST00000562956 SPATA31B1PQ5VZV4 182 aa7.49□□□□□ -1.21
LINC00838-201ENST00000562956 CLEC2AQ6UVW9 174 aa7.49□□□□□ -1.21
LINC00838-201ENST00000562956 ZNF705AQ6ZN79 300 aaPredicted RBP7.49□□□□□ -1.21
LINC00838-201ENST00000562956 SLC35E3Q7Z769 313 aa7.49□□□□□ -1.21
LINC00838-201ENST00000562956 SLC35E1Q96K37 410 aa7.49□□□□□ -1.21
LINC00838-201ENST00000562956 POLR3KQ9Y2Y1 108 aaPredicted RBP7.49□□□□□ -1.21
LINC00838-201ENST00000562956 GOLT1BQ9Y3E0 138 aa7.49□□□□□ -1.21
LINC00838-201ENST00000562956 CBY1Q9Y3M2 126 aa7.49□□□□□ -1.21
LINC00838-201ENST00000562956 OOSP1A8MZH6 123 aa7.49□□□□□ -1.21
LINC00838-201ENST00000562956 SCGB1D1O95968 90 aa7.49□□□□□ -1.21
LINC00838-201ENST00000562956 RAB4BP61018 213 aa7.49□□□□□ -1.21
LINC00838-201ENST00000562956 PVRIGQ6DKI7 326 aa7.49□□□□□ -1.21
LINC00838-201ENST00000562956 MRPL41Q8IXM3 137 aaKnown RBP7.49□□□□□ -1.21
LINC00838-201ENST00000562956 ZNF114Q8NC26 417 aa7.49□□□□□ -1.21
LINC00838-201ENST00000562956 OR2T10Q8NGZ9 312 aa7.49□□□□□ -1.21
LINC00838-201ENST00000562956 TMEM208Q9BTX3 173 aa7.49□□□□□ -1.21
LINC00838-201ENST00000562956 FBN2P35556 2912 aa7.49□□□□□ -1.21
LINC00838-201ENST00000562956 XKRY2A2RUG3 117 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 NDUFS8O00217 210 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 CNIH1O95406 144 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 ARL14EPLP0DKL9 152 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 COX6B1P14854 86 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 CD33P20138 364 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 SAA4P35542 130 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 MEF2BQ02080 365 aaPredicted RBP7.48□□□□□ -1.21
LINC00838-201ENST00000562956 DMRTA1Q5VZB9 504 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 FAM90A2PQ658T7 463 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 TEX38Q6PEX7 206 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 OR4X1Q8NH49 305 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 OR5R1Q8NH85 324 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 TMEM37Q8WXS4 190 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 NPIPB3Q92617 1050 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 PLXNB1O43157 2135 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 PAGE4O60829 102 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 STAG3L2P0CL84 134 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 STAG3L3P0CL85 134 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 PSMB3P49720 205 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 C5orf64Q2M2E5 130 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 LBHQ53QV2 105 aaPredicted RBP7.48□□□□□ -1.21
LINC00838-201ENST00000562956 PIP4P2Q8N4L2 257 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 OR1P1Q8NH06 330 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 MANBALQ9NQG1 85 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 TBL2Q9Y4P3 447 aaKnown RBP7.48□□□□□ -1.21
LINC00838-201ENST00000562956 CELSR2Q9HCU4 2923 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 IGKV1D-37A0A075B6S9 117 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 IGHV3-21A0A0B4J1V1 117 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 NCBP2LA6PVI3 153 aaKnown RBP7.48□□□□□ -1.21
LINC00838-201ENST00000562956 PAX8Q06710 450 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 FAM120AOSQ5T036 256 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 Q8N6K4 173 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 SLC25A33Q9BSK2 321 aa7.48□□□□□ -1.21
LINC00838-201ENST00000562956 FAM103A1Q9BTL3 118 aaKnown RBP7.48□□□□□ -1.21
LINC00838-201ENST00000562956 F11RQ9Y624 299 aaKnown RBP7.48□□□□□ -1.21
LINC00838-201ENST00000562956 NAV3Q8IVL0 2385 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 CENPVL3A0A0U1RRI6 287 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 RND2P52198 227 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 RHOBP62745 196 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 ZNF90Q03938 601 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 EBI3Q14213 229 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 TMEM249Q2WGJ8 235 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 CYP2G1PQ6ZSU1 146 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 NOL4LQ96MY1 436 aaPredicted RBP7.47□□□□□ -1.21
LINC00838-201ENST00000562956 PITPNC1Q9UKF7 332 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 LRRK2Q5S007 2527 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 A0A1B0GUS0 222 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 M0R143 59 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 CXorf1O96002 111 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 CRYGCP07315 174 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 UBE2G2P60604 165 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 FXYD3Q14802 87 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 FAM78BQ5VT40 261 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 MIR17HGQ75NE6 70 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 TMEM183AQ8IXX5 376 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 OR5T1Q8NG75 326 aa7.47□□□□□ -1.21
LINC00838-201ENST00000562956 IGHV3OR16-10A0A075B7F0 116 aa7.46□□□□□ -1.21
LINC00838-201ENST00000562956 NPFFO15130 113 aa7.46□□□□□ -1.21
LINC00838-201ENST00000562956 TMEM11P17152 192 aa7.46□□□□□ -1.21
LINC00838-201ENST00000562956 COL8A1P27658 744 aa7.46□□□□□ -1.21
LINC00838-201ENST00000562956 OR4F5Q8NH21 305 aa7.46□□□□□ -1.21
LINC00838-201ENST00000562956 OR4F4Q96R69 305 aa7.46□□□□□ -1.21
LINC00838-201ENST00000562956 ELOVL1Q9BW60 279 aa7.46□□□□□ -1.21
LINC00838-201ENST00000562956 SPG11Q96JI7 2443 aa7.46□□□□□ -1.21
LINC00838-201ENST00000562956 ZNF705FA8MVS1 300 aaPredicted RBP7.46□□□□□ -1.22
LINC00838-201ENST00000562956 CLDN34H7C241 214 aa7.46□□□□□ -1.22
LINC00838-201ENST00000562956 MT-CO2P00403 227 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms