RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 FAM32AQ9Y421 112 aaKnown RBP1.98□□□□□ -2.09
LEMD3-206ENST00000545026 A0A087X0T9 212 aa1.97□□□□□ -2.09
LEMD3-206ENST00000545026 TRAV1-1A0A0B4J248 108 aa1.97□□□□□ -2.09
LEMD3-206ENST00000545026 OR2B3O76000 313 aa1.97□□□□□ -2.09
LEMD3-206ENST00000545026 OR4E1P0C645 316 aa1.97□□□□□ -2.09
LEMD3-206ENST00000545026 MIFP14174 115 aa1.97□□□□□ -2.09
LEMD3-206ENST00000545026 SRIP30626 198 aa1.97□□□□□ -2.09
LEMD3-206ENST00000545026 SERPINB9P50453 376 aa1.97□□□□□ -2.09
LEMD3-206ENST00000545026 OR11H6Q8NGC7 330 aa1.97□□□□□ -2.09
LEMD3-206ENST00000545026 OR10X1Q8NGY0 326 aa1.97□□□□□ -2.09
LEMD3-206ENST00000545026 GNPDA2Q8TDQ7 276 aa1.97□□□□□ -2.09
LEMD3-206ENST00000545026 GPR146Q96CH1 333 aa1.97□□□□□ -2.09
LEMD3-206ENST00000545026 TAS2R4Q9NYW5 299 aa1.97□□□□□ -2.09
LEMD3-206ENST00000545026 SOX21Q9Y651 276 aaPredicted RBP1.97□□□□□ -2.09
LEMD3-206ENST00000545026 ZNF106Q9H2Y7 1883 aaKnown RBP1.97□□□□□ -2.09
LEMD3-206ENST00000545026 INTS1Q8N201 2190 aaKnown RBP1.96□□□□□ -2.1
LEMD3-206ENST00000545026 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
LEMD3-206ENST00000545026 IGKV2-40A0A087WW87 121 aaPredicted RBP1.96□□□□□ -2.1
LEMD3-206ENST00000545026 IGKV1-9A0A0C4DH69 117 aa1.96□□□□□ -2.1
LEMD3-206ENST00000545026 C1orf196B1AJZ1 125 aa1.96□□□□□ -2.1
LEMD3-206ENST00000545026 IGKV2D-40P01614 121 aaPredicted RBP1.96□□□□□ -2.1
LEMD3-206ENST00000545026 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.96□□□□□ -2.1
LEMD3-206ENST00000545026 OR13D1Q8NGV5 346 aa1.96□□□□□ -2.1
LEMD3-206ENST00000545026 ENY2Q9NPA8 101 aa1.96□□□□□ -2.1
LEMD3-206ENST00000545026 EPDR1Q9UM22 224 aa1.96□□□□□ -2.1
LEMD3-206ENST00000545026 KMT2BQ9UMN6 2715 aaPredicted RBP1.96□□□□□ -2.1
LEMD3-206ENST00000545026 MED1Q15648 1581 aaPredicted RBP1.95□□□□□ -2.1
LEMD3-206ENST00000545026 IGKV3-7A0A075B6H7 116 aa1.95□□□□□ -2.1
LEMD3-206ENST00000545026 TRAV4A0A0B4J268 109 aa1.95□□□□□ -2.1
LEMD3-206ENST00000545026 C2orf70A6NJV1 201 aa1.95□□□□□ -2.1
LEMD3-206ENST00000545026 CLDN25C9JDP6 229 aa1.95□□□□□ -2.1
LEMD3-206ENST00000545026 HCRTO43612 131 aa1.95□□□□□ -2.1
LEMD3-206ENST00000545026 ERP29P30040 261 aaKnown RBP1.95□□□□□ -2.1
LEMD3-206ENST00000545026 CTAG1AP78358 180 aa1.95□□□□□ -2.1
LEMD3-206ENST00000545026 TMED2Q15363 201 aa1.95□□□□□ -2.1
LEMD3-206ENST00000545026 PHF13Q86YI8 300 aaPredicted RBP1.95□□□□□ -2.1
LEMD3-206ENST00000545026 LINC00311Q8N616 119 aa1.95□□□□□ -2.1
LEMD3-206ENST00000545026 C12orf29Q8N999 325 aa1.95□□□□□ -2.1
LEMD3-206ENST00000545026 OR8D4Q8NGM9 314 aa1.95□□□□□ -2.1
LEMD3-206ENST00000545026 C9orf16Q9BUW7 83 aa1.95□□□□□ -2.1
LEMD3-206ENST00000545026 TMEM133Q9H2Q1 129 aa1.95□□□□□ -2.1
LEMD3-206ENST00000545026 COL4A5P29400 1685 aa1.95□□□□□ -2.1
LEMD3-206ENST00000545026 HEATR5BQ9P2D3 2071 aa1.95□□□□□ -2.1
LEMD3-206ENST00000545026 J3QRK9 145 aa1.94□□□□□ -2.1
LEMD3-206ENST00000545026 CYB5BO43169 146 aa1.94□□□□□ -2.1
LEMD3-206ENST00000545026 BAALC-AS2P0C853 105 aa1.94□□□□□ -2.1
LEMD3-206ENST00000545026 HIST1H2BLQ99880 126 aa1.94□□□□□ -2.1
LEMD3-206ENST00000545026 OPTCQ9UBM4 332 aa1.94□□□□□ -2.1
LEMD3-206ENST00000545026 LAMB2P55268 1798 aa1.94□□□□□ -2.1
LEMD3-206ENST00000545026 DIDO1Q9BTC0 2240 aaKnown RBP1.94□□□□□ -2.1
LEMD3-206ENST00000545026 SSR2P43308 183 aa1.93□□□□□ -2.1
LEMD3-206ENST00000545026 PDE6HQ13956 83 aa1.93□□□□□ -2.1
LEMD3-206ENST00000545026 TAF1AQ15573 450 aaPredicted RBP1.93□□□□□ -2.1
LEMD3-206ENST00000545026 TSNQ15631 228 aaKnown RBP1.93□□□□□ -2.1
LEMD3-206ENST00000545026 RNASE10Q5GAN6 216 aaKnown RBP1.93□□□□□ -2.1
LEMD3-206ENST00000545026 FAM172AQ8WUF8 416 aa1.93□□□□□ -2.1
LEMD3-206ENST00000545026 TRABDQ9H4I3 376 aa1.93□□□□□ -2.1
LEMD3-206ENST00000545026 ARMC1Q9NVT9 282 aa1.93□□□□□ -2.1
LEMD3-206ENST00000545026 ECM29Q5VYK3 1845 aa1.93□□□□□ -2.1
LEMD3-206ENST00000545026 FBN3Q75N90 2809 aa1.93□□□□□ -2.1
LEMD3-206ENST00000545026 PLXND1Q9Y4D7 1925 aa1.92□□□□□ -2.1
LEMD3-206ENST00000545026 DOCK3Q8IZD9 2030 aa1.92□□□□□ -2.1
LEMD3-206ENST00000545026 C7orf71A4D174 169 aa1.92□□□□□ -2.1
LEMD3-206ENST00000545026 OR1I1O60431 355 aa1.92□□□□□ -2.1
LEMD3-206ENST00000545026 ARL14EPLP0DKL9 152 aa1.92□□□□□ -2.1
LEMD3-206ENST00000545026 MGST1P10620 155 aaKnown RBP1.92□□□□□ -2.1
LEMD3-206ENST00000545026 BRS3P32247 399 aa1.92□□□□□ -2.1
LEMD3-206ENST00000545026 PIGPP57054 158 aa1.92□□□□□ -2.1
LEMD3-206ENST00000545026 GOLT1AQ6ZVE7 132 aa1.92□□□□□ -2.1
LEMD3-206ENST00000545026 NHP2Q9NX24 153 aaKnown RBP1.92□□□□□ -2.1
LEMD3-206ENST00000545026 SCN10AQ9Y5Y9 1956 aa1.92□□□□□ -2.1
LEMD3-206ENST00000545026 MYOFQ9NZM1 2061 aa1.92□□□□□ -2.1
LEMD3-206ENST00000545026 MICAL3Q7RTP6 2002 aa1.91□□□□□ -2.1
LEMD3-206ENST00000545026 COL6A6A6NMZ7 2263 aa1.91□□□□□ -2.1
LEMD3-206ENST00000545026 TRBV19A0A075B6N1 114 aa1.91□□□□□ -2.1
LEMD3-206ENST00000545026 UBL3O95164 117 aa1.91□□□□□ -2.1
LEMD3-206ENST00000545026 RNASE4P34096 147 aaKnown RBP1.91□□□□□ -2.1
LEMD3-206ENST00000545026 ATP5G3P48201 142 aa1.91□□□□□ -2.1
LEMD3-206ENST00000545026 LYRM7Q5U5X0 104 aa1.91□□□□□ -2.1
LEMD3-206ENST00000545026 OR4C6Q8NH72 309 aa1.91□□□□□ -2.1
LEMD3-206ENST00000545026 PHB2Q99623 299 aa1.91□□□□□ -2.1
LEMD3-206ENST00000545026 PSTPIP2Q9H939 334 aa1.91□□□□□ -2.1
LEMD3-206ENST00000545026 UTP11Q9Y3A2 253 aaKnown RBP1.91□□□□□ -2.1
LEMD3-206ENST00000545026 ARL5AQ9Y689 179 aa1.91□□□□□ -2.1
LEMD3-206ENST00000545026 ARFGEF3Q5TH69 2177 aa1.91□□□□□ -2.1
LEMD3-206ENST00000545026 MED12LQ86YW9 2145 aa1.9□□□□□ -2.1
LEMD3-206ENST00000545026 TRAV3A0A0B4J244 114 aa1.9□□□□□ -2.11
LEMD3-206ENST00000545026 LYZL6O75951 148 aa1.9□□□□□ -2.11
LEMD3-206ENST00000545026 HSPE1P61604 102 aaKnown RBP1.9□□□□□ -2.11
LEMD3-206ENST00000545026 ARF6P62330 175 aa1.9□□□□□ -2.11
LEMD3-206ENST00000545026 RHOBP62745 196 aa1.9□□□□□ -2.11
LEMD3-206ENST00000545026 BRMS1LQ5PSV4 323 aa1.9□□□□□ -2.11
LEMD3-206ENST00000545026 PXT1Q8NFP0 134 aa1.9□□□□□ -2.11
LEMD3-206ENST00000545026 OR10J5Q8NHC4 309 aa1.9□□□□□ -2.11
LEMD3-206ENST00000545026 HS3ST2Q9Y278 367 aa1.9□□□□□ -2.11
LEMD3-206ENST00000545026 SLC35A3Q9Y2D2 325 aa1.9□□□□□ -2.11
LEMD3-206ENST00000545026 ALPK2Q86TB3 2170 aa1.9□□□□□ -2.11
LEMD3-206ENST00000545026 FMN1Q68DA7 1419 aa1.9□□□□□ -2.11
LEMD3-206ENST00000545026 CAMSAP1Q5T5Y3 1602 aa1.89□□□□□ -2.11
LEMD3-206ENST00000545026 KRTAP10-4P60372 401 aaPredicted RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms