RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 RNF152Q8N8N0 203 aa8.29□□□□□ -1.08
DDB1-221ENST00000543162 OR4X2Q8NGF9 303 aa8.29□□□□□ -1.08
DDB1-221ENST00000543162 OR2G3Q8NGZ4 309 aa8.29□□□□□ -1.08
DDB1-221ENST00000543162 TMED6Q8WW62 240 aa8.29□□□□□ -1.08
DDB1-221ENST00000543162 TRGV9Q99603 122 aa8.29□□□□□ -1.08
DDB1-221ENST00000543162 PSMG3Q9BT73 122 aaPredicted RBP8.29□□□□□ -1.08
DDB1-221ENST00000543162 GGTLC1Q9BX51 225 aa8.29□□□□□ -1.08
DDB1-221ENST00000543162 RNF114Q9Y508 228 aa8.29□□□□□ -1.08
DDB1-221ENST00000543162 TIMM9Q9Y5J7 89 aa8.29□□□□□ -1.08
DDB1-221ENST00000543162 NF1P21359 2839 aa8.29□□□□□ -1.08
DDB1-221ENST00000543162 JMJD1CQ15652 2540 aa8.29□□□□□ -1.08
DDB1-221ENST00000543162 C2CD3Q4AC94 2353 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 IGKV1D-37A0A075B6S9 117 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 TCRBV4S1A1TA0A5B7 111 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 CLPSL1A2RUU4 121 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 OR2T8A6NH00 312 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 F8W735 103 aaPredicted RBP8.28□□□□□ -1.08
DDB1-221ENST00000543162 HAX1O00165 279 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 IFNA7P01567 189 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 IGHV3-11P01762 117 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 CLEC3BP05452 202 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 FABP1P07148 127 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 GPR183P32249 361 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 SELENOTP62341 195 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 IFITM2Q01629 132 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 TIGITQ495A1 244 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 ALKAL2Q6UX46 152 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 CLEC19AQ6UXS0 136 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 CYP2G1PQ6ZSU1 146 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 ZNF680Q8NEM1 530 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 CCDC140Q96MF4 163 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 ATP6V0BQ99437 205 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 SLC45A2Q9UMX9 530 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 RFNGQ9Y644 331 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 PXMP4Q9Y6I8 212 aa8.28□□□□□ -1.08
DDB1-221ENST00000543162 ZFHX3Q15911 3703 aa8.27□□□□□ -1.09
DDB1-221ENST00000543162 A0A1B0GUS0 222 aa8.27□□□□□ -1.09
DDB1-221ENST00000543162 NUPL2O15504 423 aaKnown RBP8.27□□□□□ -1.09
DDB1-221ENST00000543162 TSPAN15O95858 294 aa8.27□□□□□ -1.09
DDB1-221ENST00000543162 IGKV1-17P01599 117 aa8.27□□□□□ -1.09
DDB1-221ENST00000543162 CTSGP08311 255 aa8.27□□□□□ -1.09
DDB1-221ENST00000543162 RPL29P47914 159 aaKnown RBP8.27□□□□□ -1.09
DDB1-221ENST00000543162 SERF2P84101 59 aa8.27□□□□□ -1.09
DDB1-221ENST00000543162 ZNF90Q03938 601 aa8.27□□□□□ -1.09
DDB1-221ENST00000543162 KIAA0141Q14154 515 aaPredicted RBP8.27□□□□□ -1.09
DDB1-221ENST00000543162 FAM209BQ5JX69 171 aa8.27□□□□□ -1.09
DDB1-221ENST00000543162 FFAR4Q5NUL3 377 aa8.27□□□□□ -1.09
DDB1-221ENST00000543162 MIC13Q5XKP0 118 aa8.27□□□□□ -1.09
DDB1-221ENST00000543162 ZNF343Q6P1L6 599 aa8.27□□□□□ -1.09
DDB1-221ENST00000543162 TMEM182Q6ZP80 229 aaPredicted RBP8.27□□□□□ -1.09
DDB1-221ENST00000543162 STPG3Q8N7X2 389 aa8.27□□□□□ -1.09
DDB1-221ENST00000543162 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.27□□□□□ -1.09
DDB1-221ENST00000543162 ZNF491Q8N8L2 437 aa8.27□□□□□ -1.09
DDB1-221ENST00000543162 BPIFCQ8NFQ6 507 aa8.27□□□□□ -1.09
DDB1-221ENST00000543162 MYOZ3Q8TDC0 251 aa8.27□□□□□ -1.09
DDB1-221ENST00000543162 WIPF2Q8TF74 440 aaPredicted RBP8.27□□□□□ -1.09
DDB1-221ENST00000543162 UBE2E2Q96LR5 201 aa8.27□□□□□ -1.09
DDB1-221ENST00000543162 NIPBLQ6KC79 2804 aaeCLIP8.26□□□□□ -1.09
DDB1-221ENST00000543162 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.26□□□□□ -1.09
DDB1-221ENST00000543162 ANKRD34BA5PLL1 514 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 UMAD1C9J7I0 102 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 TGOLN2O43493 480 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 LINC00869P0C866 280 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 RD3LP0DJH9 198 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 GATA2P23769 480 aaPredicted RBP8.26□□□□□ -1.09
DDB1-221ENST00000543162 ELLP55199 621 aaPredicted RBP8.26□□□□□ -1.09
DDB1-221ENST00000543162 PROK1P58294 105 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 YPEL3P61236 119 aaPredicted RBP8.26□□□□□ -1.09
DDB1-221ENST00000543162 B2MP61769 119 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 PRR20EP86478 221 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 PRR20CP86479 221 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 PRR20DP86480 221 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 PRR20BP86481 221 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 PRR20AP86496 221 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 ZNF616Q08AN1 781 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 TCTEX1D4Q5JR98 221 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 KHDC1LQ5JSQ8 128 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 FAM74A1Q5RGS3 127 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 AKR1C8PQ5T2L2 129 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 SPSB3Q6PJ21 355 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 OR5B12Q96R08 314 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 CHRDL1Q9BU40 450 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 GNB4Q9HAV0 340 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 SLC39A9Q9NUM3 307 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 UBQLN2Q9UHD9 624 aa8.26□□□□□ -1.09
DDB1-221ENST00000543162 SETD2Q9BYW2 2564 aaPredicted RBP8.26□□□□□ -1.09
DDB1-221ENST00000543162 PPP5D1E7EU14 171 aa8.25□□□□□ -1.09
DDB1-221ENST00000543162 TOMM40O96008 361 aa8.25□□□□□ -1.09
DDB1-221ENST00000543162 MBP02144 154 aa8.25□□□□□ -1.09
DDB1-221ENST00000543162 LGALS1P09382 135 aaKnown RBP8.25□□□□□ -1.09
DDB1-221ENST00000543162 PSG1P11464 419 aa8.25□□□□□ -1.09
DDB1-221ENST00000543162 ADMP35318 185 aa8.25□□□□□ -1.09
DDB1-221ENST00000543162 ARL3P36405 182 aa8.25□□□□□ -1.09
DDB1-221ENST00000543162 FOXL1Q12952 345 aa8.25□□□□□ -1.09
DDB1-221ENST00000543162 ACOT6Q3I5F7 207 aaPredicted RBP8.25□□□□□ -1.09
DDB1-221ENST00000543162 Q6ZRG5 221 aa8.25□□□□□ -1.09
DDB1-221ENST00000543162 ZNF767PQ75MW2 155 aa8.25□□□□□ -1.09
DDB1-221ENST00000543162 C11orf44Q8N8P7 122 aa8.25□□□□□ -1.09
DDB1-221ENST00000543162 Q8WTZ3 238 aa8.25□□□□□ -1.09
DDB1-221ENST00000543162 PEF1Q9UBV8 284 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms