RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 MGAQ8IWI9 3026 aa10.15□□□□□ -0.78
LIN54-210ENST00000510877 MYOD1P15172 320 aa10.15□□□□□ -0.78
LIN54-210ENST00000510877 RPL15P61313 204 aaKnown RBP10.15□□□□□ -0.78
LIN54-210ENST00000510877 MSMPQ1L6U9 139 aa10.15□□□□□ -0.78
LIN54-210ENST00000510877 PLPPR1Q8TBJ4 325 aa10.15□□□□□ -0.78
LIN54-210ENST00000510877 C1orf159Q96HA4 380 aa10.15□□□□□ -0.78
LIN54-210ENST00000510877 CCL28Q9NRJ3 127 aa10.15□□□□□ -0.78
LIN54-210ENST00000510877 FBXL7Q9UJT9 491 aa10.15□□□□□ -0.78
LIN54-210ENST00000510877 SLC45A2Q9UMX9 530 aa10.15□□□□□ -0.78
LIN54-210ENST00000510877 SIGLEC9Q9Y336 463 aa10.15□□□□□ -0.78
LIN54-210ENST00000510877 A0A1B0GWJ7 208 aa10.15□□□□□ -0.79
LIN54-210ENST00000510877 C11orf94C9JXX5 98 aa10.15□□□□□ -0.79
LIN54-210ENST00000510877 ATP6V0CP27449 155 aa10.15□□□□□ -0.79
LIN54-210ENST00000510877 PTX4Q96A99 478 aa10.15□□□□□ -0.79
LIN54-210ENST00000510877 C14orf144Q96I85 54 aa10.15□□□□□ -0.79
LIN54-210ENST00000510877 Q96M66 194 aa10.15□□□□□ -0.79
LIN54-210ENST00000510877 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.15□□□□□ -0.79
LIN54-210ENST00000510877 XIRP2A4UGR9 3374 aa10.15□□□□□ -0.79
LIN54-210ENST00000510877 G6PCP35575 357 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 H2BFSP57053 126 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 EWSR1Q01844 656 aaKnown RBP eCLIP10.14□□□□□ -0.79
LIN54-210ENST00000510877 FBLN7Q53RD9 439 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 TMEM147Q9BVK8 224 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 ZFP30Q9Y2G7 519 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 LAMTOR2Q9Y2Q5 125 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 H3BP45 60 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 HKR1P10072 659 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 CCL1P22362 96 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 DUX4L9Q6RFH8 374 aaPredicted RBP10.14□□□□□ -0.79
LIN54-210ENST00000510877 SIGMAR1Q99720 223 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 ZNF106Q9H2Y7 1883 aaKnown RBP10.14□□□□□ -0.79
LIN54-210ENST00000510877 TNFRSF13BO14836 293 aaPredicted RBP10.14□□□□□ -0.79
LIN54-210ENST00000510877 PPYP01298 95 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 LAIR2Q6ISS4 152 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 OSR1Q8TAX0 266 aaPredicted RBP10.14□□□□□ -0.79
LIN54-210ENST00000510877 CTXND1A0A1B0GTU2 59 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 FBLL1A6NHQ2 334 aaKnown RBP10.14□□□□□ -0.79
LIN54-210ENST00000510877 PITX3O75364 302 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 VENTXO95231 258 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 ID1P41134 155 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 SP6Q3SY56 376 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 ERASQ7Z444 233 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 OR1N2Q8NGR9 330 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 OR4A5Q8NH83 315 aa10.14□□□□□ -0.79
LIN54-210ENST00000510877 TRBV9A0A0B4J1U6 114 aa10.13□□□□□ -0.79
LIN54-210ENST00000510877 HOXB4P17483 251 aaPredicted RBP10.13□□□□□ -0.79
LIN54-210ENST00000510877 F2RP25116 425 aa10.13□□□□□ -0.79
LIN54-210ENST00000510877 CORTO00230 105 aa10.13□□□□□ -0.79
LIN54-210ENST00000510877 FCGR3AP08637 254 aa10.13□□□□□ -0.79
LIN54-210ENST00000510877 HIST1H1EP10412 219 aaKnown RBP10.13□□□□□ -0.79
LIN54-210ENST00000510877 MMP9P14780 707 aa10.13□□□□□ -0.79
LIN54-210ENST00000510877 IER3P46695 156 aa10.13□□□□□ -0.79
LIN54-210ENST00000510877 DYNLT3P51808 116 aa10.13□□□□□ -0.79
LIN54-210ENST00000510877 STXBP6Q8NFX7 210 aa10.13□□□□□ -0.79
LIN54-210ENST00000510877 MSGN1A6NI15 193 aa10.13□□□□□ -0.79
LIN54-210ENST00000510877 HLA-DQA1P01909 254 aa10.13□□□□□ -0.79
LIN54-210ENST00000510877 APCSP02743 223 aa10.13□□□□□ -0.79
LIN54-210ENST00000510877 MFAP4P55083 255 aa10.13□□□□□ -0.79
LIN54-210ENST00000510877 TRBV5-5A0A0J9YX44 114 aa10.12□□□□□ -0.79
LIN54-210ENST00000510877 YPEL1O60688 119 aa10.12□□□□□ -0.79
LIN54-210ENST00000510877 OR8I2Q8N0Y5 310 aa10.12□□□□□ -0.79
LIN54-210ENST00000510877 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.12□□□□□ -0.79
LIN54-210ENST00000510877 YPEL2Q96QA6 119 aa10.12□□□□□ -0.79
LIN54-210ENST00000510877 C3orf85A0A1B0GTC6 90 aa10.12□□□□□ -0.79
LIN54-210ENST00000510877 RRHO14718 337 aa10.12□□□□□ -0.79
LIN54-210ENST00000510877 METTL26Q96S19 204 aa10.12□□□□□ -0.79
LIN54-210ENST00000510877 OVOL1O14753 267 aa10.12□□□□□ -0.79
LIN54-210ENST00000510877 RNASE1P07998 156 aaKnown RBP10.12□□□□□ -0.79
LIN54-210ENST00000510877 MPZP25189 248 aa10.12□□□□□ -0.79
LIN54-210ENST00000510877 LDLRAD2Q5SZI1 272 aa10.12□□□□□ -0.79
LIN54-210ENST00000510877 SLC25A22Q9H936 323 aa10.12□□□□□ -0.79
LIN54-210ENST00000510877 TMEM167BQ9NRX6 74 aa10.12□□□□□ -0.79
LIN54-210ENST00000510877 COMPP49747 757 aaPredicted RBP10.12□□□□□ -0.79
LIN54-210ENST00000510877 FGF8P55075 233 aaPredicted RBP10.12□□□□□ -0.79
LIN54-210ENST00000510877 SPRNQ5BIV9 151 aa10.12□□□□□ -0.79
LIN54-210ENST00000510877 FGFRL1Q8N441 504 aa10.12□□□□□ -0.79
LIN54-210ENST00000510877 ZNRD1Q9P1U0 126 aa10.12□□□□□ -0.79
LIN54-210ENST00000510877 TRAV24A0A0B4J272 114 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 SERTM2A0A1B0GWG4 89 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 HELTA6NFD8 242 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 COLCA2A8K830 154 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 TCL1AP56279 114 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 OR51B2Q9Y5P1 312 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 IGHV3OR16-12A0A075B7B8 117 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 IGKV1-9A0A0C4DH69 117 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 TMEM238LA0A1B0GVL6 79 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 A6NJY4 79 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 ELANEP08246 267 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 C5orf64Q2M2E5 130 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 C9orf66Q5T8R8 295 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 GAPTQ8N292 157 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 SMIM8Q96KF7 97 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 RHOGP84095 191 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 MORN2Q502X0 79 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 ZNF645Q8N7E2 425 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 DERL1Q9BUN8 251 aa10.11□□□□□ -0.79
LIN54-210ENST00000510877 QTRT1Q9BXR0 403 aaKnown RBP10.11□□□□□ -0.79
LIN54-210ENST00000510877 HTN1P15515 57 aa10.1□□□□□ -0.79
LIN54-210ENST00000510877 EBLN2Q6P2I7 272 aa10.1□□□□□ -0.79
LIN54-210ENST00000510877 OR11H1Q8NG94 326 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms