RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 DNAJC30Q96LL9 226 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 IGF2BP2-AS1Q96M15 143 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 CNBD2Q96M20 576 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 IP6K3Q96PC2 410 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 SEC22CQ9BRL7 303 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 C11orf68Q9H3H3 251 aaKnown RBP2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 FAM96AQ9H5X1 160 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 RPP21Q9H633 154 aaKnown RBP2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 RSL24D1Q9UHA3 163 aaKnown RBP2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 TAC3Q9UHF0 121 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 SNX12Q9UMY4 172 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 MYLKQ15746 1914 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 SCN8AQ9UQD0 1980 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 PIEZO2Q9H5I5 2752 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 UNC13CQ8NB66 2214 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 CACNA1GO43497 2377 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 YLPM1P49750 1951 aaKnown RBP2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 IGLV1-50A0A075B6I6 118 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 IGHV3-49A0A0A0MS15 119 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 OR51F1A6NGY5 319 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 MIF4GDA9UHW6 222 aaKnown RBP2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 LINC00587B1AMM8 73 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 PANO1I0J062 215 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 COX7A2LO14548 114 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 EIF1BO60739 113 aaKnown RBP2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 BANF1O75531 89 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 APOMO95445 188 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 HLA-DQB1P01920 261 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 C1QAP02745 245 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 SCGB1A1P11684 91 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 GABRA3P34903 492 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 EIF1P41567 113 aaKnown RBP2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 SPINT3P49223 89 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 ZNF140P52738 457 aaPredicted RBP2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 GNG11P61952 73 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 GTF3C1Q12789 2109 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 WDR86Q86TI4 376 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 GPHB5Q86YW7 130 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 CLVS1Q8IUQ0 354 aaPredicted RBP2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 GDPD1Q8N9F7 314 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 DEFB124Q8NES8 71 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 OR13C4Q8NGS5 318 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 OR9A2Q8NGT5 310 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 RAB2BQ8WUD1 216 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 DYDC1Q8WWB3 177 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 PATE1Q8WXA2 126 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 GALMQ96C23 342 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 GNPNAT1Q96EK6 184 aaPredicted RBP2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 COX14Q96I36 57 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 ABHD14BQ96IU4 210 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 FOPNLQ96NB1 174 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 CCL13Q99616 98 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 B9D2Q9BPU9 175 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 SHANK2-AS3Q9BTD1 123 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 CCDC90BQ9GZT6 254 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 LINC00574Q9H8X3 128 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 TMEM138Q9NPI0 162 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 ACER3Q9NUN7 267 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 DHCR7Q9UBM7 475 aaKnown RBP2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 JPT1Q9UK76 154 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 ATRXP46100 2492 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 AHCTF1Q8WYP5 2266 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 SPTBP11277 2137 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 PTPRBP23467 1997 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 ACACAQ13085 2346 aa2.07□□□□□ -2.08
DEPDC1-204ENST00000489862 RELNP78509 3460 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 UQCRHLA0A096LP55 91 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 A8MT66 165 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 BPY2O14599 106 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 ZNF861PO60384 105 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 OR1I1O60431 355 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 POP7O75817 140 aaKnown RBP2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 UQCRHP07919 91 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 SMIM17P0DL12 118 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 CRABP2P29373 138 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 SRIP30626 198 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 PHBP35232 272 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 PPP1CCP36873 323 aaKnown RBP2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 ATP5G3P48201 142 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 RPL26P61254 145 aaKnown RBP2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 IGLV3-21P80748 117 aaPredicted RBP2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 RHEBQ15382 184 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 BATFQ16520 125 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 DEFB133Q30KQ1 61 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 IBA57Q5T440 356 aaKnown RBP2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 SAMD13Q5VXD3 122 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 SLC22A24Q8N4F4 322 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 ZFP62Q8NB50 900 aaPredicted RBP2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 OR8J3Q8NGG0 315 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 SLC25A40Q8TBP6 338 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 CD200R1Q8TD46 325 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 CT55Q8WUE5 264 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 ZNF799Q96GE5 643 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 CAPZA3Q96KX2 299 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 EFCAB11Q9BUY7 163 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 EIF5A2Q9GZV4 153 aaKnown RBP2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 C21orf62Q9NYP8 219 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 PRO0461Q9UI25 63 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 OR52A1Q9UKL2 312 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 630.9 ms