RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 LAMTOR1Q6IAA8 161 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 CLEC19AQ6UXS0 136 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 TMEM144Q7Z5S9 345 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 UBAC2Q8NBM4 344 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 KLHL30-AS1Q8NEE0 82 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 OR5B12Q96R08 314 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 ZNF747Q9BV97 191 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 PARD6GQ9BYG4 376 aaPredicted RBP7.38□□□□□ -1.23
MCF2L-227ENST00000486806 SMIM3Q9BZL3 60 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 ZC4H2Q9NQZ6 224 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 GAR1Q9NY12 217 aaKnown RBP7.38□□□□□ -1.23
MCF2L-227ENST00000486806 WDR83OSQ9Y284 106 aa7.38□□□□□ -1.23
MCF2L-227ENST00000486806 SMCO3A2RU48 225 aa7.37□□□□□ -1.23
MCF2L-227ENST00000486806 PPP5D1E7EU14 171 aa7.37□□□□□ -1.23
MCF2L-227ENST00000486806 TAAR5O14804 337 aa7.37□□□□□ -1.23
MCF2L-227ENST00000486806 BCL2L11O43521 198 aa7.37□□□□□ -1.23
MCF2L-227ENST00000486806 GNG7O60262 68 aa7.37□□□□□ -1.23
MCF2L-227ENST00000486806 CLEC3BP05452 202 aa7.37□□□□□ -1.23
MCF2L-227ENST00000486806 OR10J1P30954 320 aa7.37□□□□□ -1.23
MCF2L-227ENST00000486806 FHL3Q13643 280 aa7.37□□□□□ -1.23
MCF2L-227ENST00000486806 ZNF266Q14584 549 aa7.37□□□□□ -1.23
MCF2L-227ENST00000486806 SPSB3Q6PJ21 355 aa7.37□□□□□ -1.23
MCF2L-227ENST00000486806 C8orf86Q6ZUL3 223 aa7.37□□□□□ -1.23
MCF2L-227ENST00000486806 PPP1R14BQ96C90 147 aa7.37□□□□□ -1.23
MCF2L-227ENST00000486806 TRGV9Q99603 122 aa7.37□□□□□ -1.23
MCF2L-227ENST00000486806 CHRDL1Q9BU40 450 aa7.37□□□□□ -1.23
MCF2L-227ENST00000486806 WDR61Q9GZS3 305 aaKnown RBP7.37□□□□□ -1.23
MCF2L-227ENST00000486806 ARL6Q9H0F7 186 aa7.37□□□□□ -1.23
MCF2L-227ENST00000486806 NPVFQ9HCQ7 196 aa7.37□□□□□ -1.23
MCF2L-227ENST00000486806 CYTL1Q9NRR1 136 aa7.37□□□□□ -1.23
MCF2L-227ENST00000486806 PEF1Q9UBV8 284 aaKnown RBP7.37□□□□□ -1.23
MCF2L-227ENST00000486806 IGHV4OR15-8A0A075B7B6 117 aa7.36□□□□□ -1.23
MCF2L-227ENST00000486806 TRAV30A0A087WSZ9 112 aa7.36□□□□□ -1.23
MCF2L-227ENST00000486806 A0A087WW49 117 aa7.36□□□□□ -1.23
MCF2L-227ENST00000486806 A0A1W2PRX2 142 aa7.36□□□□□ -1.23
MCF2L-227ENST00000486806 NUPL2O15504 423 aaKnown RBP7.36□□□□□ -1.23
MCF2L-227ENST00000486806 ARL3P36405 182 aa7.36□□□□□ -1.23
MCF2L-227ENST00000486806 DEFB136Q30KP8 78 aa7.36□□□□□ -1.23
MCF2L-227ENST00000486806 TIGITQ495A1 244 aa7.36□□□□□ -1.23
MCF2L-227ENST00000486806 RPL7L1Q6DKI1 246 aaKnown RBP7.36□□□□□ -1.23
MCF2L-227ENST00000486806 TEPPQ6URK8 271 aa7.36□□□□□ -1.23
MCF2L-227ENST00000486806 TMUB2Q71RG4 321 aa7.36□□□□□ -1.23
MCF2L-227ENST00000486806 RAX2Q96IS3 184 aa7.36□□□□□ -1.23
MCF2L-227ENST00000486806 MGST2Q99735 147 aa7.36□□□□□ -1.23
MCF2L-227ENST00000486806 MDFIQ99750 246 aa7.36□□□□□ -1.23
MCF2L-227ENST00000486806 ARPC5LQ9BPX5 153 aa7.36□□□□□ -1.23
MCF2L-227ENST00000486806 NPCDR1Q9BY65 106 aa7.36□□□□□ -1.23
MCF2L-227ENST00000486806 DNHD1Q96M86 4753 aa7.36□□□□□ -1.23
MCF2L-227ENST00000486806 ANKRD34BA5PLL1 514 aa7.35□□□□□ -1.23
MCF2L-227ENST00000486806 ZFP92A6NM28 416 aa7.35□□□□□ -1.23
MCF2L-227ENST00000486806 NUDT19A8MXV4 375 aa7.35□□□□□ -1.23
MCF2L-227ENST00000486806 GGCTO75223 188 aaKnown RBP7.35□□□□□ -1.23
MCF2L-227ENST00000486806 MPDU1O75352 247 aa7.35□□□□□ -1.23
MCF2L-227ENST00000486806 SCGB2A1O75556 95 aa7.35□□□□□ -1.23
MCF2L-227ENST00000486806 HSPB1P04792 205 aaKnown RBP7.35□□□□□ -1.23
MCF2L-227ENST00000486806 FGF7P21781 194 aa7.35□□□□□ -1.23
MCF2L-227ENST00000486806 YPEL3P61236 119 aaPredicted RBP7.35□□□□□ -1.23
MCF2L-227ENST00000486806 ZNF90Q03938 601 aa7.35□□□□□ -1.23
MCF2L-227ENST00000486806 OPCMLQ14982 345 aa7.35□□□□□ -1.23
MCF2L-227ENST00000486806 KRTAP21-3Q3LHN1 58 aa7.35□□□□□ -1.23
MCF2L-227ENST00000486806 BTNL8Q6UX41 500 aa7.35□□□□□ -1.23
MCF2L-227ENST00000486806 C12orf54Q6X4T0 127 aa7.35□□□□□ -1.23
MCF2L-227ENST00000486806 CYP2G1PQ6ZSU1 146 aa7.35□□□□□ -1.23
MCF2L-227ENST00000486806 OR11H1Q8NG94 326 aa7.35□□□□□ -1.23
MCF2L-227ENST00000486806 GGTLC1Q9BX51 225 aa7.35□□□□□ -1.23
MCF2L-227ENST00000486806 ARV1Q9H2C2 271 aa7.35□□□□□ -1.23
MCF2L-227ENST00000486806 TENM1Q9UKZ4 2725 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 KANTRA0A1W2PQU2 76 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 LINC01619G3V211 115 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 AGPAT2O15120 278 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 JTBO76095 146 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 OR2C1O95371 312 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 TOMM40O96008 361 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 IFNA5P01569 189 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 HNRNPCP07910 306 aaKnown RBP eCLIP7.34□□□□□ -1.23
MCF2L-227ENST00000486806 HOXD3P31249 432 aaPredicted RBP7.34□□□□□ -1.23
MCF2L-227ENST00000486806 CAMLGP49069 296 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 PRR20EP86478 221 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 PRR20CP86479 221 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 PRR20DP86480 221 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 PRR20BP86481 221 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 PRR20AP86496 221 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 RELQ04864 619 aaPredicted RBP7.34□□□□□ -1.23
MCF2L-227ENST00000486806 ZNF616Q08AN1 781 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 NSUN5P1Q3KNT7 163 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 SHISA2Q6UWI4 295 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 ZNF600Q6ZNG1 722 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 TMEM182Q6ZP80 229 aaPredicted RBP7.34□□□□□ -1.23
MCF2L-227ENST00000486806 C3orf56Q8N813 242 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 OR1N2Q8NGR9 330 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 STOML3Q8TAV4 291 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 TMEM190Q8WZ59 177 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 ZFAND3Q9H8U3 227 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 SLC45A2Q9UMX9 530 aa7.34□□□□□ -1.23
MCF2L-227ENST00000486806 BORCS7-ASMTA0A0B4J1R7 106 aa7.33□□□□□ -1.24
MCF2L-227ENST00000486806 CCL24O00175 119 aa7.33□□□□□ -1.24
MCF2L-227ENST00000486806 NDUFA4O00483 81 aa7.33□□□□□ -1.24
MCF2L-227ENST00000486806 FABP1P07148 127 aa7.33□□□□□ -1.24
MCF2L-227ENST00000486806 PSG1P11464 419 aa7.33□□□□□ -1.24
MCF2L-227ENST00000486806 ZP3P21754 424 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms