RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 C19orf73Q9NVV2 129 aa9.68□□□□□ -0.86
COL5A1-206ENST00000465877 TRAV30A0A087WSZ9 112 aa9.67□□□□□ -0.86
COL5A1-206ENST00000465877 IGHV3-49A0A0A0MS15 119 aa9.67□□□□□ -0.86
COL5A1-206ENST00000465877 TRAV14DV4A0A0A6YYC5 116 aa9.67□□□□□ -0.86
COL5A1-206ENST00000465877 FAM240BA0A1B0GVZ2 78 aa9.67□□□□□ -0.86
COL5A1-206ENST00000465877 TSPAN4O14817 238 aa9.67□□□□□ -0.86
COL5A1-206ENST00000465877 IFNA21P01568 189 aa9.67□□□□□ -0.86
COL5A1-206ENST00000465877 IFNA4P05014 189 aa9.67□□□□□ -0.86
COL5A1-206ENST00000465877 OR10J1P30954 320 aa9.67□□□□□ -0.86
COL5A1-206ENST00000465877 ATP5IP56385 69 aaPredicted RBP9.67□□□□□ -0.86
COL5A1-206ENST00000465877 LAMTOR1Q6IAA8 161 aa9.67□□□□□ -0.86
COL5A1-206ENST00000465877 MZT2BQ6NZ67 158 aa9.67□□□□□ -0.86
COL5A1-206ENST00000465877 SBSPONQ8IVN8 264 aa9.67□□□□□ -0.86
COL5A1-206ENST00000465877 RNF2Q99496 336 aa9.67□□□□□ -0.86
COL5A1-206ENST00000465877 RHPN1-AS1Q9BWJ2 59 aa9.67□□□□□ -0.86
COL5A1-206ENST00000465877 SMPXQ9UHP9 88 aa9.67□□□□□ -0.86
COL5A1-206ENST00000465877 IGHV3OR16-13A0A075B7E8 117 aa9.66□□□□□ -0.86
COL5A1-206ENST00000465877 IGHV3-74A0A0B4J1X5 117 aa9.66□□□□□ -0.86
COL5A1-206ENST00000465877 H3BP45 60 aa9.66□□□□□ -0.86
COL5A1-206ENST00000465877 WRBO00258 174 aa9.66□□□□□ -0.86
COL5A1-206ENST00000465877 CHEK1O14757 476 aa9.66□□□□□ -0.86
COL5A1-206ENST00000465877 NKX2-1P43699 371 aaPredicted RBP9.66□□□□□ -0.86
COL5A1-206ENST00000465877 RAB11AP62491 216 aa9.66□□□□□ -0.86
COL5A1-206ENST00000465877 DEFB125Q8N687 156 aa9.66□□□□□ -0.86
COL5A1-206ENST00000465877 OR4D5Q8NGN0 318 aa9.66□□□□□ -0.86
COL5A1-206ENST00000465877 ENKURQ8TC29 256 aa9.66□□□□□ -0.86
COL5A1-206ENST00000465877 ST8SIA2Q92186 375 aa9.66□□□□□ -0.86
COL5A1-206ENST00000465877 SLC35E1Q96K37 410 aa9.66□□□□□ -0.86
COL5A1-206ENST00000465877 SEC22CQ9BRL7 303 aa9.66□□□□□ -0.86
COL5A1-206ENST00000465877 TUBA4BQ9H853 241 aa9.66□□□□□ -0.86
COL5A1-206ENST00000465877 SRD5A3Q9H8P0 318 aa9.66□□□□□ -0.86
COL5A1-206ENST00000465877 U3KQK5 164 aa9.66□□□□□ -0.86
COL5A1-206ENST00000465877 OR11H12B2RN74 326 aa9.65□□□□□ -0.86
COL5A1-206ENST00000465877 CCSO14618 274 aa9.65□□□□□ -0.86
COL5A1-206ENST00000465877 SSSCA1O60232 199 aa9.65□□□□□ -0.86
COL5A1-206ENST00000465877 APOHP02749 345 aaPredicted RBP9.65□□□□□ -0.86
COL5A1-206ENST00000465877 H2AFB2P0C5Z0 115 aa9.65□□□□□ -0.86
COL5A1-206ENST00000465877 BMI1P35226 326 aa9.65□□□□□ -0.86
COL5A1-206ENST00000465877 POLR2GP62487 172 aaKnown RBP eCLIP9.65□□□□□ -0.86
COL5A1-206ENST00000465877 IAH1Q2TAA2 248 aaPredicted RBP9.65□□□□□ -0.86
COL5A1-206ENST00000465877 ZNF431Q8TF32 576 aaPredicted RBP9.65□□□□□ -0.86
COL5A1-206ENST00000465877 NPIPB3Q92617 1050 aa9.65□□□□□ -0.86
COL5A1-206ENST00000465877 METTL26Q96S19 204 aa9.65□□□□□ -0.86
COL5A1-206ENST00000465877 VSIRQ9H7M9 311 aa9.65□□□□□ -0.86
COL5A1-206ENST00000465877 PAIP2BQ9ULR5 123 aaKnown RBP9.65□□□□□ -0.86
COL5A1-206ENST00000465877 IGHV3-66A0A0C4DH42 116 aa9.64□□□□□ -0.87
COL5A1-206ENST00000465877 OR4C46A6NHA9 309 aa9.64□□□□□ -0.87
COL5A1-206ENST00000465877 PRSS46E5RG02 174 aa9.64□□□□□ -0.87
COL5A1-206ENST00000465877 SCGB1D2O95969 90 aa9.64□□□□□ -0.87
COL5A1-206ENST00000465877 TOMM40O96008 361 aa9.64□□□□□ -0.87
COL5A1-206ENST00000465877 GPX4P36969 197 aaPredicted RBP9.64□□□□□ -0.87
COL5A1-206ENST00000465877 YPEL3P61236 119 aaPredicted RBP9.64□□□□□ -0.87
COL5A1-206ENST00000465877 RPP30P78346 268 aaKnown RBP9.64□□□□□ -0.87
COL5A1-206ENST00000465877 IFITM3Q01628 133 aa9.64□□□□□ -0.87
COL5A1-206ENST00000465877 ID3Q02535 119 aa9.64□□□□□ -0.87
COL5A1-206ENST00000465877 ZBTB8BQ8NAP8 495 aaPredicted RBP9.64□□□□□ -0.87
COL5A1-206ENST00000465877 TM2D3Q9BRN9 247 aa9.64□□□□□ -0.87
COL5A1-206ENST00000465877 TMEM231Q9H6L2 316 aa9.64□□□□□ -0.87
COL5A1-206ENST00000465877 IL4P05112 153 aa9.63□□□□□ -0.87
COL5A1-206ENST00000465877 CRYBB3P26998 211 aa9.63□□□□□ -0.87
COL5A1-206ENST00000465877 GAMTQ14353 236 aa9.63□□□□□ -0.87
COL5A1-206ENST00000465877 USF2Q15853 346 aaPredicted RBP9.63□□□□□ -0.87
COL5A1-206ENST00000465877 ODF3L2Q3SX64 289 aa9.63□□□□□ -0.87
COL5A1-206ENST00000465877 SPANXN5Q5MJ07 72 aa9.63□□□□□ -0.87
COL5A1-206ENST00000465877 FAM90A2PQ658T7 463 aa9.63□□□□□ -0.87
COL5A1-206ENST00000465877 TCF24Q7RTU0 167 aa9.63□□□□□ -0.87
COL5A1-206ENST00000465877 RCHY1Q96PM5 261 aa9.63□□□□□ -0.87
COL5A1-206ENST00000465877 ZMAT4Q9H898 229 aa9.63□□□□□ -0.87
COL5A1-206ENST00000465877 UBQLN2Q9UHD9 624 aa9.63□□□□□ -0.87
COL5A1-206ENST00000465877 RCL1Q9Y2P8 373 aaKnown RBP9.63□□□□□ -0.87
COL5A1-206ENST00000465877 STRAPQ9Y3F4 350 aaKnown RBP9.63□□□□□ -0.87
COL5A1-206ENST00000465877 IGKV3-7A0A075B6H7 116 aa9.62□□□□□ -0.87
COL5A1-206ENST00000465877 ZFP92A6NM28 416 aa9.62□□□□□ -0.87
COL5A1-206ENST00000465877 NPPCP23582 126 aa9.62□□□□□ -0.87
COL5A1-206ENST00000465877 HAGHQ16775 308 aa9.62□□□□□ -0.87
COL5A1-206ENST00000465877 ACOT7LQ6ZUV0 252 aa9.62□□□□□ -0.87
COL5A1-206ENST00000465877 NRARPQ7Z6K4 114 aa9.62□□□□□ -0.87
COL5A1-206ENST00000465877 C12orf45Q8N5I9 185 aaPredicted RBP9.62□□□□□ -0.87
COL5A1-206ENST00000465877 Q8WTZ3 238 aa9.62□□□□□ -0.87
COL5A1-206ENST00000465877 NARS2Q96I59 477 aaKnown RBP9.62□□□□□ -0.87
COL5A1-206ENST00000465877 NBEAL2Q6ZNJ1 2754 aa9.62□□□□□ -0.87
COL5A1-206ENST00000465877 IGKV1D-37A0A075B6S9 117 aa9.61□□□□□ -0.87
COL5A1-206ENST00000465877 A0A1W2PS18 150 aa9.61□□□□□ -0.87
COL5A1-206ENST00000465877 RBMY1BA6NDE4 496 aaKnown RBP9.61□□□□□ -0.87
COL5A1-206ENST00000465877 RBMY1EA6NEQ0 496 aaKnown RBP9.61□□□□□ -0.87
COL5A1-206ENST00000465877 FAM25EA8MYX2 175 aa9.61□□□□□ -0.87
COL5A1-206ENST00000465877 CD5P06127 495 aa9.61□□□□□ -0.87
COL5A1-206ENST00000465877 HNRNPCP07910 306 aaKnown RBP eCLIP9.61□□□□□ -0.87
COL5A1-206ENST00000465877 RBMY1DP0C7P1 496 aaKnown RBP9.61□□□□□ -0.87
COL5A1-206ENST00000465877 PSG1P11464 419 aa9.61□□□□□ -0.87
COL5A1-206ENST00000465877 P2RY1P47900 373 aa9.61□□□□□ -0.87
COL5A1-206ENST00000465877 TFPI2P48307 235 aa9.61□□□□□ -0.87
COL5A1-206ENST00000465877 LINC00322Q6ZN03 302 aaPredicted RBP9.61□□□□□ -0.87
COL5A1-206ENST00000465877 THAP8Q8NA92 274 aa9.61□□□□□ -0.87
COL5A1-206ENST00000465877 OR51G1Q8NGK1 321 aa9.61□□□□□ -0.87
COL5A1-206ENST00000465877 RNF125Q96EQ8 232 aa9.61□□□□□ -0.87
COL5A1-206ENST00000465877 WWC2-AS2Q96NR7 200 aa9.61□□□□□ -0.87
COL5A1-206ENST00000465877 SPATA25Q9BR10 227 aa9.61□□□□□ -0.87
COL5A1-206ENST00000465877 PSENENQ9NZ42 101 aa9.61□□□□□ -0.87
COL5A1-206ENST00000465877 GSKIPQ9P0R6 139 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms