RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 GFRA3O60609 400 aa13.72□□□□□ -0.21
PMS1-213ENST00000441310 EIF4EBP1Q13541 118 aaPredicted RBP13.72□□□□□ -0.21
PMS1-213ENST00000441310 MAP1LC3CQ9BXW4 147 aa13.72□□□□□ -0.21
PMS1-213ENST00000441310 PSG11Q9UQ72 335 aa13.72□□□□□ -0.21
PMS1-213ENST00000441310 SEC11AP67812 179 aa13.72□□□□□ -0.21
PMS1-213ENST00000441310 Q6ZR03 302 aa13.72□□□□□ -0.21
PMS1-213ENST00000441310 A0A0G2JLM5 398 aa13.71□□□□□ -0.21
PMS1-213ENST00000441310 RAB31Q13636 194 aa13.71□□□□□ -0.21
PMS1-213ENST00000441310 ZNF503Q96F45 646 aa13.71□□□□□ -0.21
PMS1-213ENST00000441310 NBASA2RRP1 2371 aa13.71□□□□□ -0.21
PMS1-213ENST00000441310 HOXA4Q00056 320 aaPredicted RBP13.71□□□□□ -0.21
PMS1-213ENST00000441310 NPFFR1Q9GZQ6 430 aa13.71□□□□□ -0.21
PMS1-213ENST00000441310 JKAMPQ9P055 326 aa13.71□□□□□ -0.21
PMS1-213ENST00000441310 PPIAL4CA0A0B4J2A2 164 aa13.71□□□□□ -0.22
PMS1-213ENST00000441310 A0A1B0GV72 72 aa13.71□□□□□ -0.22
PMS1-213ENST00000441310 OR2J3O76001 311 aa13.71□□□□□ -0.22
PMS1-213ENST00000441310 TFF1P04155 84 aa13.71□□□□□ -0.22
PMS1-213ENST00000441310 REG1BP48304 166 aa13.71□□□□□ -0.22
PMS1-213ENST00000441310 ALKBH6Q3KRA9 238 aa13.71□□□□□ -0.22
PMS1-213ENST00000441310 NRN1LQ496H8 165 aa13.71□□□□□ -0.22
PMS1-213ENST00000441310 RASL11AQ6T310 242 aa13.71□□□□□ -0.22
PMS1-213ENST00000441310 TPRX1Q8N7U7 411 aa13.71□□□□□ -0.22
PMS1-213ENST00000441310 NABP2Q9BQ15 211 aa13.71□□□□□ -0.22
PMS1-213ENST00000441310 SPCS1Q9Y6A9 102 aa13.71□□□□□ -0.22
PMS1-213ENST00000441310 TET2Q6N021 2002 aaPredicted RBP13.71□□□□□ -0.22
PMS1-213ENST00000441310 DCHS1Q96JQ0 3298 aa13.7□□□□□ -0.22
PMS1-213ENST00000441310 VWC2LB2RUY7 222 aa13.7□□□□□ -0.22
PMS1-213ENST00000441310 AGFG2O95081 481 aa13.7□□□□□ -0.22
PMS1-213ENST00000441310 VDAC2P45880 294 aaPredicted RBP13.7□□□□□ -0.22
PMS1-213ENST00000441310 AESQ08117 197 aa13.7□□□□□ -0.22
PMS1-213ENST00000441310 C1RLQ9NZP8 487 aa13.7□□□□□ -0.22
PMS1-213ENST00000441310 FBLL1A6NHQ2 334 aaKnown RBP13.7□□□□□ -0.22
PMS1-213ENST00000441310 COX8AP10176 69 aa13.7□□□□□ -0.22
PMS1-213ENST00000441310 ZNF137PP52743 207 aa13.7□□□□□ -0.22
PMS1-213ENST00000441310 KIR3DS1Q14943 382 aa13.7□□□□□ -0.22
PMS1-213ENST00000441310 PET117Q6UWS5 81 aa13.7□□□□□ -0.22
PMS1-213ENST00000441310 TMEM116Q8NCL8 245 aa13.7□□□□□ -0.22
PMS1-213ENST00000441310 MS4A6AQ9H2W1 248 aa13.7□□□□□ -0.22
PMS1-213ENST00000441310 TEX48A0A1B0GUV7 120 aa13.69□□□□□ -0.22
PMS1-213ENST00000441310 J3QT63 122 aa13.69□□□□□ -0.22
PMS1-213ENST00000441310 GRAMD2BQ96HH9 432 aa13.69□□□□□ -0.22
PMS1-213ENST00000441310 HINT2Q9BX68 163 aa13.69□□□□□ -0.22
PMS1-213ENST00000441310 H3BRM9 83 aa13.69□□□□□ -0.22
PMS1-213ENST00000441310 ZNF207O43670 478 aaKnown RBP13.69□□□□□ -0.22
PMS1-213ENST00000441310 PSPNO60542 156 aa13.69□□□□□ -0.22
PMS1-213ENST00000441310 CSN3P07498 182 aa13.69□□□□□ -0.22
PMS1-213ENST00000441310 TEX45Q8NA69 505 aa13.69□□□□□ -0.22
PMS1-213ENST00000441310 SGK494Q96LW2 274 aa13.69□□□□□ -0.22
PMS1-213ENST00000441310 SIGMAR1Q99720 223 aa13.69□□□□□ -0.22
PMS1-213ENST00000441310 A6NDN8 102 aa13.69□□□□□ -0.22
PMS1-213ENST00000441310 MBD6Q96DN6 1003 aa13.69□□□□□ -0.22
PMS1-213ENST00000441310 PPIAL4EA0A075B759 164 aa13.68□□□□□ -0.22
PMS1-213ENST00000441310 PPIAL4FP0DN26 164 aa13.68□□□□□ -0.22
PMS1-213ENST00000441310 IGHV1-2P23083 117 aa13.68□□□□□ -0.22
PMS1-213ENST00000441310 MOB3BQ86TA1 216 aa13.68□□□□□ -0.22
PMS1-213ENST00000441310 H1FXQ92522 213 aaKnown RBP13.68□□□□□ -0.22
PMS1-213ENST00000441310 TMPRSS3P57727 454 aa13.68□□□□□ -0.22
PMS1-213ENST00000441310 IGHV3-13P01766 116 aa13.68□□□□□ -0.22
PMS1-213ENST00000441310 IGHV3-7P01780 117 aa13.68□□□□□ -0.22
PMS1-213ENST00000441310 FOXF2Q12947 444 aa13.68□□□□□ -0.22
PMS1-213ENST00000441310 WDR82Q6UXN9 313 aa13.68□□□□□ -0.22
PMS1-213ENST00000441310 ATP6V0BQ99437 205 aa13.68□□□□□ -0.22
PMS1-213ENST00000441310 IDI2-AS1Q9NZ38 188 aa13.68□□□□□ -0.22
PMS1-213ENST00000441310 SLC25A10Q9UBX3 287 aaPredicted RBP13.68□□□□□ -0.22
PMS1-213ENST00000441310 RABAC1Q9UI14 185 aa13.68□□□□□ -0.22
PMS1-213ENST00000441310 FZR1Q9UM11 496 aa13.68□□□□□ -0.22
PMS1-213ENST00000441310 PLCE1Q9P212 2302 aa13.67□□□□□ -0.22
PMS1-213ENST00000441310 PRR20EP86478 221 aa13.67□□□□□ -0.22
PMS1-213ENST00000441310 PRR20CP86479 221 aa13.67□□□□□ -0.22
PMS1-213ENST00000441310 PRR20DP86480 221 aa13.67□□□□□ -0.22
PMS1-213ENST00000441310 PRR20BP86481 221 aa13.67□□□□□ -0.22
PMS1-213ENST00000441310 PRR20AP86496 221 aa13.67□□□□□ -0.22
PMS1-213ENST00000441310 FAM162BQ5T6X4 162 aa13.67□□□□□ -0.22
PMS1-213ENST00000441310 Q8TCH9 128 aa13.67□□□□□ -0.22
PMS1-213ENST00000441310 LRRC29Q8WV35 223 aa13.67□□□□□ -0.22
PMS1-213ENST00000441310 TCF19Q9Y242 345 aa13.67□□□□□ -0.22
PMS1-213ENST00000441310 TMEM30CPA0ZSE6 113 aa13.67□□□□□ -0.22
PMS1-213ENST00000441310 C22orf46C9J442 243 aa13.67□□□□□ -0.22
PMS1-213ENST00000441310 SCGB2A2Q13296 93 aa13.67□□□□□ -0.22
PMS1-213ENST00000441310 PKIBQ9C010 78 aa13.67□□□□□ -0.22
PMS1-213ENST00000441310 MPC1Q9Y5U8 109 aa13.67□□□□□ -0.22
PMS1-213ENST00000441310 LIPFP07098 398 aa13.66□□□□□ -0.22
PMS1-213ENST00000441310 WDR86Q86TI4 376 aa13.66□□□□□ -0.22
PMS1-213ENST00000441310 CXorf67Q86X51 503 aaPredicted RBP13.66□□□□□ -0.22
PMS1-213ENST00000441310 VSTM2AQ8TAG5 236 aa13.66□□□□□ -0.22
PMS1-213ENST00000441310 CHCHD1Q96BP2 118 aaKnown RBP13.66□□□□□ -0.22
PMS1-213ENST00000441310 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.66□□□□□ -0.22
PMS1-213ENST00000441310 RAB9AP51151 201 aa13.66□□□□□ -0.22
PMS1-213ENST00000441310 HSD52Q0P140 79 aa13.66□□□□□ -0.22
PMS1-213ENST00000441310 C9orf106Q8NAJ2 232 aa13.66□□□□□ -0.22
PMS1-213ENST00000441310 OR10W1Q8NGF6 305 aa13.66□□□□□ -0.22
PMS1-213ENST00000441310 TRAV5A0A0B4J249 113 aa13.66□□□□□ -0.22
PMS1-213ENST00000441310 SMPXQ9UHP9 88 aa13.66□□□□□ -0.22
PMS1-213ENST00000441310 F2RL2O00254 374 aa13.65□□□□□ -0.22
PMS1-213ENST00000441310 GRPP07492 148 aa13.65□□□□□ -0.22
PMS1-213ENST00000441310 TSSC4Q9Y5U2 329 aaPredicted RBP13.65□□□□□ -0.22
PMS1-213ENST00000441310 ZGRF1Q86YA3 2104 aa13.65□□□□□ -0.22
PMS1-213ENST00000441310 KLK10O43240 276 aa13.65□□□□□ -0.22
PMS1-213ENST00000441310 CEACAM3P40198 252 aa13.65□□□□□ -0.22
PMS1-213ENST00000441310 ERVK-16P61578 105 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms