RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 OR2T6Q8NHC8 308 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 CT45A3Q8NHU0 189 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 BORCS7Q96B45 105 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 ZNF586Q9NXT0 402 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 ZNF835Q9Y2P0 537 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 NKX6-3A6NJ46 265 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 M0QXV9 152 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 EREGO14944 169 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 VENTXO95231 258 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 GCGP01275 180 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 LINC00869P0C866 280 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 CCKARP32238 428 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 ACSF3Q4G176 576 aaPredicted RBP6.63□□□□□ -1.35
HPS4-205ENST00000429411 TEX38Q6PEX7 206 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 LINC00479Q96M42 142 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 CSTL1Q9H114 145 aa6.63□□□□□ -1.35
HPS4-205ENST00000429411 M0R143 59 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 MPDU1O75352 247 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 MMP23AO75900 390 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 RNASEKQ6P5S7 137 aaKnown RBP6.62□□□□□ -1.35
HPS4-205ENST00000429411 OR1B1Q8NGR6 318 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 OR5B3Q8NH48 314 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 AGMATQ9BSE5 352 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 WNT10AQ9GZT5 417 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 TECRQ9NZ01 308 aaKnown RBP6.62□□□□□ -1.35
HPS4-205ENST00000429411 TNRC6AQ8NDV7 1962 aaKnown RBP6.62□□□□□ -1.35
HPS4-205ENST00000429411 DOPEY1Q5JWR5 2465 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 TRBV20OR9-2A0A075B6H5 130 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 A6NNC1 897 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 A8MWP6 167 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 HSBP1O75506 76 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 MOSP00540 346 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 PYYP10082 97 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 COX7A1P24310 79 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 SRIP30626 198 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 MFAP2P55001 183 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 RELBQ01201 579 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 ST6GALNAC6Q969X2 333 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 TRGV8A0A0C4DH27 118 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 F2Z2F3 143 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 PROP1O75360 226 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 SLC25A5P05141 298 aaKnown RBP6.62□□□□□ -1.35
HPS4-205ENST00000429411 USF1P22415 310 aaPredicted RBP6.62□□□□□ -1.35
HPS4-205ENST00000429411 MAS1LP35410 378 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 ZNF137PP52743 207 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 CRYBA4P53673 196 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 IBA57Q5T440 356 aaKnown RBP6.62□□□□□ -1.35
HPS4-205ENST00000429411 FAM90A1Q86YD7 464 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 OR2D3Q8NGH3 330 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 NPIPB3Q92617 1050 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 STARD4Q96DR4 205 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 TMEM208Q9BTX3 173 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 HES4Q9HCC6 221 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 ZNF355PQ9NSJ1 428 aa6.62□□□□□ -1.35
HPS4-205ENST00000429411 TRAV25A0A0B4J276 109 aa6.61□□□□□ -1.35
HPS4-205ENST00000429411 hADV38S2A0JD32 116 aa6.61□□□□□ -1.35
HPS4-205ENST00000429411 SRRM5B3KS81 715 aa6.61□□□□□ -1.35
HPS4-205ENST00000429411 IGKV3-15P01624 115 aa6.61□□□□□ -1.35
HPS4-205ENST00000429411 AREGP15514 252 aa6.61□□□□□ -1.35
HPS4-205ENST00000429411 CDKN1AP38936 164 aa6.61□□□□□ -1.35
HPS4-205ENST00000429411 ACTL10Q5JWF8 245 aa6.61□□□□□ -1.35
HPS4-205ENST00000429411 PRSS57Q6UWY2 283 aa6.61□□□□□ -1.35
HPS4-205ENST00000429411 Q8TCH9 128 aa6.61□□□□□ -1.35
HPS4-205ENST00000429411 IFI27L2Q9H2X8 130 aa6.61□□□□□ -1.35
HPS4-205ENST00000429411 SAP30LQ9HAJ7 183 aa6.61□□□□□ -1.35
HPS4-205ENST00000429411 SLC25A10Q9UBX3 287 aaPredicted RBP6.61□□□□□ -1.35
HPS4-205ENST00000429411 PMS2P5A8MQ11 134 aa6.61□□□□□ -1.35
HPS4-205ENST00000429411 GPR6P46095 362 aaPredicted RBP6.61□□□□□ -1.35
HPS4-205ENST00000429411 MSMPQ1L6U9 139 aa6.61□□□□□ -1.35
HPS4-205ENST00000429411 GBGT1Q8N5D6 347 aa6.61□□□□□ -1.35
HPS4-205ENST00000429411 ELOVL5Q9NYP7 299 aa6.61□□□□□ -1.35
HPS4-205ENST00000429411 TACC2O95359 2948 aa6.61□□□□□ -1.35
HPS4-205ENST00000429411 KBTBD11-OT1A0A1B0GTJ5 212 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 C15orf61A6NNL5 157 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 DIRC3C9JPN6 131 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 GGCTO75223 188 aaKnown RBP6.6□□□□□ -1.35
HPS4-205ENST00000429411 CSN3P07498 182 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 TFPI2P48307 235 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 ATP5IP56385 69 aaPredicted RBP6.6□□□□□ -1.35
HPS4-205ENST00000429411 TNXAQ16473 311 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 LEMD1Q68G75 181 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 KIR3DL3Q8N743 410 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 TCTEX1D1Q8N7M0 179 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 CFHR4Q92496 578 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 FLYWCH2Q96CP2 140 aaKnown RBP6.6□□□□□ -1.35
HPS4-205ENST00000429411 MRPL20Q9BYC9 149 aaKnown RBP6.6□□□□□ -1.35
HPS4-205ENST00000429411 TMEM167BQ9NRX6 74 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 PRNDQ9UKY0 176 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 TMEM8BA6NDV4 472 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 C15orf65H3BRN8 121 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 YPEL1O60688 119 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 SAA1P0DJI8 122 aaPredicted RBP6.6□□□□□ -1.35
HPS4-205ENST00000429411 TCTAP57738 103 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 GNG5P63218 68 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 LCN2P80188 198 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 TMEM183BQ1AE95 376 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 C3orf36Q3SXR2 165 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 MRPL52Q86TS9 123 aaKnown RBP6.6□□□□□ -1.35
HPS4-205ENST00000429411 YPEL2Q96QA6 119 aa6.6□□□□□ -1.35
HPS4-205ENST00000429411 SSBP4Q9BWG4 385 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms