RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 FAM3BP58499 235 aaPredicted RBP12.25□□□□□ -0.45
LRCH3-202ENST00000414675 PLGLAQ15195 96 aa12.25□□□□□ -0.45
LRCH3-202ENST00000414675 MMDQ15546 238 aa12.25□□□□□ -0.45
LRCH3-202ENST00000414675 OR1P1Q8NH06 330 aa12.25□□□□□ -0.45
LRCH3-202ENST00000414675 C11orf52Q96A22 123 aa12.25□□□□□ -0.45
LRCH3-202ENST00000414675 UHRF2Q96PU4 802 aa12.25□□□□□ -0.45
LRCH3-202ENST00000414675 RNF5Q99942 180 aa12.25□□□□□ -0.45
LRCH3-202ENST00000414675 DNAJC4Q9NNZ3 241 aa12.25□□□□□ -0.45
LRCH3-202ENST00000414675 F11RQ9Y624 299 aaKnown RBP12.25□□□□□ -0.45
LRCH3-202ENST00000414675 LCN2P80188 198 aa12.24□□□□□ -0.45
LRCH3-202ENST00000414675 PQLC2Q6ZP29 291 aa12.24□□□□□ -0.45
LRCH3-202ENST00000414675 TMEM167BQ9NRX6 74 aa12.24□□□□□ -0.45
LRCH3-202ENST00000414675 SVEP1Q4LDE5 3571 aa12.24□□□□□ -0.45
LRCH3-202ENST00000414675 CSMD1Q96PZ7 3565 aa12.24□□□□□ -0.45
LRCH3-202ENST00000414675 HNF1AP20823 631 aa12.23□□□□□ -0.45
LRCH3-202ENST00000414675 PAX2Q02962 417 aa12.23□□□□□ -0.45
LRCH3-202ENST00000414675 MRPL41Q8IXM3 137 aaKnown RBP12.23□□□□□ -0.45
LRCH3-202ENST00000414675 PFDN5Q99471 154 aa12.23□□□□□ -0.45
LRCH3-202ENST00000414675 MRPL32Q9BYC8 188 aaKnown RBP12.23□□□□□ -0.45
LRCH3-202ENST00000414675 GSX1Q9H4S2 264 aaPredicted RBP12.23□□□□□ -0.45
LRCH3-202ENST00000414675 COL12A1Q99715 3063 aa12.23□□□□□ -0.45
LRCH3-202ENST00000414675 GGTLC3B5MD39 225 aa12.23□□□□□ -0.45
LRCH3-202ENST00000414675 COX7A2P2O60397 106 aa12.23□□□□□ -0.45
LRCH3-202ENST00000414675 GGCTO75223 188 aaKnown RBP12.23□□□□□ -0.45
LRCH3-202ENST00000414675 HOXB4P17483 251 aaPredicted RBP12.23□□□□□ -0.45
LRCH3-202ENST00000414675 TAS2R45P59539 299 aa12.23□□□□□ -0.45
LRCH3-202ENST00000414675 SSX2Q16385 188 aa12.23□□□□□ -0.45
LRCH3-202ENST00000414675 OCC1Q8TAD7 63 aa12.23□□□□□ -0.45
LRCH3-202ENST00000414675 EAF1Q96JC9 268 aaPredicted RBP12.23□□□□□ -0.45
LRCH3-202ENST00000414675 TNFRSF19Q9NS68 423 aa12.23□□□□□ -0.45
LRCH3-202ENST00000414675 MDFIC2A0A1B0GVS7 189 aa12.22□□□□□ -0.45
LRCH3-202ENST00000414675 NBR2O15453 112 aa12.22□□□□□ -0.45
LRCH3-202ENST00000414675 CD99P14209 185 aa12.22□□□□□ -0.45
LRCH3-202ENST00000414675 CEACAM3P40198 252 aa12.22□□□□□ -0.45
LRCH3-202ENST00000414675 C1orf122Q6ZSJ8 110 aa12.22□□□□□ -0.45
LRCH3-202ENST00000414675 OR5AU1Q8NGC0 362 aa12.22□□□□□ -0.45
LRCH3-202ENST00000414675 ZNF355PQ9NSJ1 428 aa12.22□□□□□ -0.45
LRCH3-202ENST00000414675 ARL2-SNX15V9GYD0 113 aa12.22□□□□□ -0.45
LRCH3-202ENST00000414675 USP9XQ93008 2570 aaPredicted RBP12.22□□□□□ -0.45
LRCH3-202ENST00000414675 RD3LP0DJH9 198 aa12.22□□□□□ -0.45
LRCH3-202ENST00000414675 PYYP10082 97 aa12.22□□□□□ -0.45
LRCH3-202ENST00000414675 C10orf113Q5VZT2 155 aa12.22□□□□□ -0.45
LRCH3-202ENST00000414675 ETFRF1Q6IPR1 90 aa12.22□□□□□ -0.45
LRCH3-202ENST00000414675 TMEM183AQ8IXX5 376 aa12.22□□□□□ -0.45
LRCH3-202ENST00000414675 KIR3DL3Q8N743 410 aa12.22□□□□□ -0.45
LRCH3-202ENST00000414675 TMEM116Q8NCL8 245 aa12.22□□□□□ -0.45
LRCH3-202ENST00000414675 PACRGQ96M98 296 aaPredicted RBP12.22□□□□□ -0.45
LRCH3-202ENST00000414675 BPESC1Q9GZL8 116 aa12.22□□□□□ -0.45
LRCH3-202ENST00000414675 SIRPDQ9H106 197 aa12.22□□□□□ -0.45
LRCH3-202ENST00000414675 CACNA1BQ00975 2339 aa12.21□□□□□ -0.45
LRCH3-202ENST00000414675 TRAV20A0A0B4J274 112 aa12.21□□□□□ -0.45
LRCH3-202ENST00000414675 XKRY2A2RUG3 117 aa12.21□□□□□ -0.45
LRCH3-202ENST00000414675 K7EN84 100 aa12.21□□□□□ -0.45
LRCH3-202ENST00000414675 NDUFA3O95167 84 aa12.21□□□□□ -0.45
LRCH3-202ENST00000414675 CRYBB3P26998 211 aa12.21□□□□□ -0.45
LRCH3-202ENST00000414675 SELENOTP62341 195 aa12.21□□□□□ -0.45
LRCH3-202ENST00000414675 FAM103A1Q9BTL3 118 aaKnown RBP12.21□□□□□ -0.45
LRCH3-202ENST00000414675 ABCA2Q9BZC7 2435 aa12.21□□□□□ -0.46
LRCH3-202ENST00000414675 CNIH1O95406 144 aa12.21□□□□□ -0.46
LRCH3-202ENST00000414675 UBE2L3P68036 154 aaKnown RBP12.21□□□□□ -0.46
LRCH3-202ENST00000414675 HES1Q14469 280 aa12.21□□□□□ -0.46
LRCH3-202ENST00000414675 CDPF1Q6NVV7 123 aa12.21□□□□□ -0.46
LRCH3-202ENST00000414675 NPBQ8NG41 125 aa12.21□□□□□ -0.46
LRCH3-202ENST00000414675 OR1L4Q8NGR5 311 aa12.21□□□□□ -0.46
LRCH3-202ENST00000414675 RNF2Q99496 336 aa12.21□□□□□ -0.46
LRCH3-202ENST00000414675 TRGV9Q99603 122 aa12.21□□□□□ -0.46
LRCH3-202ENST00000414675 HIST1H2BLQ99880 126 aa12.21□□□□□ -0.46
LRCH3-202ENST00000414675 OVOL3O00110 214 aa12.2□□□□□ -0.46
LRCH3-202ENST00000414675 LMO4P61968 165 aa12.2□□□□□ -0.46
LRCH3-202ENST00000414675 ACTL10Q5JWF8 245 aa12.2□□□□□ -0.46
LRCH3-202ENST00000414675 SFRP2Q96HF1 295 aa12.2□□□□□ -0.46
LRCH3-202ENST00000414675 BTF3L4Q96K17 158 aa12.2□□□□□ -0.46
LRCH3-202ENST00000414675 WNT10AQ9GZT5 417 aa12.2□□□□□ -0.46
LRCH3-202ENST00000414675 DOPEY1Q5JWR5 2465 aa12.2□□□□□ -0.46
LRCH3-202ENST00000414675 I3L2K1 104 aa12.2□□□□□ -0.46
LRCH3-202ENST00000414675 TYMSP04818 313 aa12.2□□□□□ -0.46
LRCH3-202ENST00000414675 SNRPCP09234 159 aaKnown RBP12.2□□□□□ -0.46
LRCH3-202ENST00000414675 ORM2P19652 201 aa12.2□□□□□ -0.46
LRCH3-202ENST00000414675 SUMO1P63165 101 aaKnown RBP12.2□□□□□ -0.46
LRCH3-202ENST00000414675 ZFYVE26Q68DK2 2539 aa12.19□□□□□ -0.46
LRCH3-202ENST00000414675 IGHV2-70DA0A0C4DH43 119 aa12.19□□□□□ -0.46
LRCH3-202ENST00000414675 A0A0U1RQK1 487 aa12.19□□□□□ -0.46
LRCH3-202ENST00000414675 ZNF320A2RRD8 509 aa12.19□□□□□ -0.46
LRCH3-202ENST00000414675 CORTO00230 105 aa12.19□□□□□ -0.46
LRCH3-202ENST00000414675 BPIFB3P59826 476 aa12.19□□□□□ -0.46
LRCH3-202ENST00000414675 C5orf64Q2M2E5 130 aa12.19□□□□□ -0.46
LRCH3-202ENST00000414675 LINC00305Q7Z4B0 112 aa12.19□□□□□ -0.46
LRCH3-202ENST00000414675 OR1B1Q8NGR6 318 aa12.19□□□□□ -0.46
LRCH3-202ENST00000414675 A0A1W2PRE2 83 aa12.18□□□□□ -0.46
LRCH3-202ENST00000414675 IGHV4-39P01824 125 aa12.18□□□□□ -0.46
LRCH3-202ENST00000414675 FXYD3Q14802 87 aa12.18□□□□□ -0.46
LRCH3-202ENST00000414675 TEX38Q6PEX7 206 aa12.18□□□□□ -0.46
LRCH3-202ENST00000414675 C22orf15Q8WYQ4 148 aa12.18□□□□□ -0.46
LRCH3-202ENST00000414675 TBX15Q96SF7 602 aa12.18□□□□□ -0.46
LRCH3-202ENST00000414675 IMMP2LQ96T52 175 aa12.18□□□□□ -0.46
LRCH3-202ENST00000414675 PAXXQ9BUH6 204 aa12.18□□□□□ -0.46
LRCH3-202ENST00000414675 C9JCJ5 164 aa12.18□□□□□ -0.46
LRCH3-202ENST00000414675 RNF224P0DH78 156 aa12.18□□□□□ -0.46
LRCH3-202ENST00000414675 FXYD5Q96DB9 178 aa12.18□□□□□ -0.46
LRCH3-202ENST00000414675 BBC3Q96PG8 261 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms