RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 IGLV1-44P01699 117 aa4.09□□□□□ -1.76
SCN3A-203ENST00000409101 HLA-DQA1P01909 254 aa4.09□□□□□ -1.76
SCN3A-203ENST00000409101 AMBPP02760 352 aa4.09□□□□□ -1.76
SCN3A-203ENST00000409101 NMUP48645 174 aa4.09□□□□□ -1.76
SCN3A-203ENST00000409101 VAMP3Q15836 100 aa4.09□□□□□ -1.76
SCN3A-203ENST00000409101 C10orf55Q5SWW7 151 aa4.09□□□□□ -1.76
SCN3A-203ENST00000409101 C9orf66Q5T8R8 295 aa4.09□□□□□ -1.76
SCN3A-203ENST00000409101 FAM89BQ8N5H3 189 aa4.09□□□□□ -1.76
SCN3A-203ENST00000409101 F11RQ9Y624 299 aaKnown RBP4.09□□□□□ -1.76
SCN3A-203ENST00000409101 ARID1BQ8NFD5 2236 aaPredicted RBP4.09□□□□□ -1.76
SCN3A-203ENST00000409101 HBBP68871 147 aa4.09□□□□□ -1.76
SCN3A-203ENST00000409101 BIVMQ86UB2 503 aa4.09□□□□□ -1.76
SCN3A-203ENST00000409101 OR4D5Q8NGN0 318 aa4.09□□□□□ -1.76
SCN3A-203ENST00000409101 HS3ST6Q96QI5 342 aa4.09□□□□□ -1.76
SCN3A-203ENST00000409101 RBM38Q9H0Z9 239 aaKnown RBP4.09□□□□□ -1.76
SCN3A-203ENST00000409101 RPP21Q9H633 154 aaKnown RBP4.09□□□□□ -1.76
SCN3A-203ENST00000409101 IGHV3-53P01767 116 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 HOXB4P17483 251 aaPredicted RBP4.08□□□□□ -1.76
SCN3A-203ENST00000409101 LMO1P25800 156 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 TAS2R60P59551 318 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 MST1LQ2TV78 715 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 TEX36Q5VZQ5 186 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 C9orf62Q8N4C0 152 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 COQ2Q96H96 371 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 NLRC5Q86WI3 1866 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 A0A0A6YYD4 124 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 A0A1B0GW15 77 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 IFITM10A6NMD0 228 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 PRR32B1ATL7 298 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 TCTAP57738 103 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 GNG5P63218 68 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 KLF17Q5JT82 389 aaPredicted RBP4.08□□□□□ -1.76
SCN3A-203ENST00000409101 TMEM183AQ8IXX5 376 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 MUC21A0A0G2JKD1 596 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 MUC21A0A140T8X8 626 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 TMEM218A2RU14 115 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 CA1P00915 261 aaPredicted RBP4.08□□□□□ -1.76
SCN3A-203ENST00000409101 ELANEP08246 267 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 DEFB130BP0DP73 79 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 DEFB130AP0DP74 79 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 FAM3BP58499 235 aaPredicted RBP4.08□□□□□ -1.76
SCN3A-203ENST00000409101 DEFB131AP59861 70 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 Q6AWC8 147 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 F5H768 121 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 VENTXO95231 258 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 TOMM40O96008 361 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 IGHV4-39P01824 125 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 VN1R17PQ8TDU5 208 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 PRELID3AQ96N28 172 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 PHOX2AO14813 284 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 CDX1P47902 265 aaPredicted RBP4.08□□□□□ -1.76
SCN3A-203ENST00000409101 SUPT4H1P63272 117 aaKnown RBP4.08□□□□□ -1.76
SCN3A-203ENST00000409101 COTL1Q14019 142 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 C10orf105Q8TEF2 133 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 ST6GALNAC6Q969X2 333 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 SFRP2Q96HF1 295 aa4.08□□□□□ -1.76
SCN3A-203ENST00000409101 NUP210Q8TEM1 1887 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-203ENST00000409101 TRAV9-2A0A087WT02 112 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 TRAV12-3A0A0B4J271 114 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 IGHV4-61A0A0C4DH41 118 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 ETV2O00321 342 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-203ENST00000409101 MPZP25189 248 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 CNTFRP26992 372 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 TDGF1P3P51864 188 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 LRRC75A-AS1Q8N1F1 130 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 STPG2Q8N412 459 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 TMEM190Q8WZ59 177 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 TRGV9Q99603 122 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 RARRES2Q99969 163 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 NIT2Q9NQR4 276 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 WDR81Q562E7 1941 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 TMEM238LA0A1B0GVL6 79 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 C7orf77A4D0Y5 90 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 A6NJY4 79 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 F8VVB4 439 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 F8VWA3 439 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 H7C2G1 150 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 COX6CP09669 75 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 GCSAMLQ5JQS6 135 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 SCGB3A1Q96QR1 104 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 TRBV6-6A0A0A6YYG2 114 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 IGHV3-73A0A0B4J1V6 119 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 IGHV4-59P01825 116 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 PSG1P11464 419 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 OR10D4PQ8NGN7 298 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 LINC00477Q96M19 166 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 SLC25A39Q9BZJ4 359 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-203ENST00000409101 MRPL18Q9H0U6 180 aaKnown RBP4.07□□□□□ -1.76
SCN3A-203ENST00000409101 PSG8Q9UQ74 426 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 MPTX1A8MV57 137 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 H3BVH4 76 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 IGHV2-70P01814 119 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 CXCL2P19875 107 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 LOXP28300 417 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-203ENST00000409101 RPL36AP83881 106 aaKnown RBP4.07□□□□□ -1.76
SCN3A-203ENST00000409101 EFNB1P98172 346 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 ZNF562Q6V9R5 426 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 OR10AG1Q8NH19 301 aa4.07□□□□□ -1.76
SCN3A-203ENST00000409101 RPL36ALQ969Q0 106 aaKnown RBP4.07□□□□□ -1.76
SCN3A-203ENST00000409101 IGKV2-40A0A087WW87 121 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms