RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 INO80EQ8NBZ0 244 aaPredicted RBP25.59■■□□□ 1.69
CSNK1E-204ENST00000403904 OR4F17Q8NGA8 305 aa25.59■■□□□ 1.69
CSNK1E-204ENST00000403904 AQP10Q96PS8 301 aa25.59■■□□□ 1.69
CSNK1E-204ENST00000403904 OR4F4Q96R69 305 aa25.59■■□□□ 1.69
CSNK1E-204ENST00000403904 NUPL2O15504 423 aaKnown RBP25.58■■□□□ 1.69
CSNK1E-204ENST00000403904 ARPC5O15511 151 aa25.58■■□□□ 1.69
CSNK1E-204ENST00000403904 SPSB3Q6PJ21 355 aa25.58■■□□□ 1.69
CSNK1E-204ENST00000403904 OR1S2Q8NGQ3 325 aa25.58■■□□□ 1.69
CSNK1E-204ENST00000403904 IGHV3-35A0A0C4DH35 117 aa25.57■■□□□ 1.68
CSNK1E-204ENST00000403904 GGCTO75223 188 aaKnown RBP25.57■■□□□ 1.68
CSNK1E-204ENST00000403904 OR2C1O95371 312 aa25.57■■□□□ 1.68
CSNK1E-204ENST00000403904 OR10J1P30954 320 aa25.57■■□□□ 1.68
CSNK1E-204ENST00000403904 FHL3Q13643 280 aa25.57■■□□□ 1.68
CSNK1E-204ENST00000403904 IGKV1OR2-108A0A075B7D4 117 aa25.56■■□□□ 1.68
CSNK1E-204ENST00000403904 RNF222A6NCQ9 220 aa25.56■■□□□ 1.68
CSNK1E-204ENST00000403904 IGLC1P0CG04 106 aa25.56■■□□□ 1.68
CSNK1E-204ENST00000403904 HOXD3P31249 432 aaPredicted RBP25.56■■□□□ 1.68
CSNK1E-204ENST00000403904 SLURP1P55000 103 aa25.56■■□□□ 1.68
CSNK1E-204ENST00000403904 CLINT1Q14677 625 aa25.56■■□□□ 1.68
CSNK1E-204ENST00000403904 SMIM3Q9BZL3 60 aa25.56■■□□□ 1.68
CSNK1E-204ENST00000403904 NPVFQ9HCQ7 196 aa25.56■■□□□ 1.68
CSNK1E-204ENST00000403904 FNDC10F2Z333 226 aa25.56■■□□□ 1.68
CSNK1E-204ENST00000403904 MYCNOSP40205 109 aa25.56■■□□□ 1.68
CSNK1E-204ENST00000403904 AP2S1P53680 142 aaPredicted RBP25.56■■□□□ 1.68
CSNK1E-204ENST00000403904 RPEL1Q2QD12 228 aa25.56■■□□□ 1.68
CSNK1E-204ENST00000403904 TIGITQ495A1 244 aa25.56■■□□□ 1.68
CSNK1E-204ENST00000403904 SPATA3Q8NHX4 192 aa25.56■■□□□ 1.68
CSNK1E-204ENST00000403904 UQCC1Q9NVA1 299 aa25.56■■□□□ 1.68
CSNK1E-204ENST00000403904 TRAV30A0A087WSZ9 112 aa25.55■■□□□ 1.68
CSNK1E-204ENST00000403904 M0QZ24 198 aa25.55■■□□□ 1.68
CSNK1E-204ENST00000403904 TSPAN15O95858 294 aa25.55■■□□□ 1.68
CSNK1E-204ENST00000403904 IGKV1-17P01599 117 aa25.55■■□□□ 1.68
CSNK1E-204ENST00000403904 ATP6V1FQ16864 119 aa25.55■■□□□ 1.68
CSNK1E-204ENST00000403904 TMEM144Q7Z5S9 345 aa25.55■■□□□ 1.68
CSNK1E-204ENST00000403904 IGKV1D-37A0A075B6S9 117 aa25.54■■□□□ 1.68
CSNK1E-204ENST00000403904 ZFP92A6NM28 416 aa25.54■■□□□ 1.68
CSNK1E-204ENST00000403904 PF4P02776 101 aa25.54■■□□□ 1.68
CSNK1E-204ENST00000403904 ZP3P21754 424 aa25.54■■□□□ 1.68
CSNK1E-204ENST00000403904 TREML4Q6UXN2 200 aa25.54■■□□□ 1.68
CSNK1E-204ENST00000403904 TMEM147Q9BVK8 224 aa25.54■■□□□ 1.68
CSNK1E-204ENST00000403904 VWC2Q2TAL6 325 aa25.53■■□□□ 1.68
CSNK1E-204ENST00000403904 THAP8Q8NA92 274 aa25.53■■□□□ 1.68
CSNK1E-204ENST00000403904 HMSDA8MTL9 139 aa25.52■■□□□ 1.68
CSNK1E-204ENST00000403904 C1QBP02746 253 aa25.52■■□□□ 1.68
CSNK1E-204ENST00000403904 MFFQ9GZY8 342 aa25.52■■□□□ 1.68
CSNK1E-204ENST00000403904 UBE2L5PA0A1B0GUS4 154 aa25.52■■□□□ 1.68
CSNK1E-204ENST00000403904 SCGB2A1O75556 95 aa25.52■■□□□ 1.68
CSNK1E-204ENST00000403904 DNHD1Q96M86 4753 aa25.51■■□□□ 1.67
CSNK1E-204ENST00000403904 ZNF90Q03938 601 aa25.51■■□□□ 1.67
CSNK1E-204ENST00000403904 ZNF414Q96IQ9 312 aa25.51■■□□□ 1.67
CSNK1E-204ENST00000403904 FBXL17Q9UF56 701 aa25.51■■□□□ 1.67
CSNK1E-204ENST00000403904 TEPPQ6URK8 271 aa25.5■■□□□ 1.67
CSNK1E-204ENST00000403904 DLX4Q92988 240 aaPredicted RBP25.5■■□□□ 1.67
CSNK1E-204ENST00000403904 SYNJ2BPP57105 145 aa25.49■■□□□ 1.67
CSNK1E-204ENST00000403904 RELQ04864 619 aaPredicted RBP25.49■■□□□ 1.67
CSNK1E-204ENST00000403904 KLF5Q13887 457 aaPredicted RBP25.49■■□□□ 1.67
CSNK1E-204ENST00000403904 GPHB5Q86YW7 130 aa25.49■■□□□ 1.67
CSNK1E-204ENST00000403904 ATP5SQ99766 215 aa25.49■■□□□ 1.67
CSNK1E-204ENST00000403904 WFDC1Q9HC57 220 aa25.49■■□□□ 1.67
CSNK1E-204ENST00000403904 TRGV9Q99603 122 aa25.48■■□□□ 1.67
CSNK1E-204ENST00000403904 WDR83OSQ9Y284 106 aa25.48■■□□□ 1.67
CSNK1E-204ENST00000403904 LSM4Q9Y4Z0 139 aaKnown RBP25.48■■□□□ 1.67
CSNK1E-204ENST00000403904 PFDN1O60925 122 aa25.48■■□□□ 1.67
CSNK1E-204ENST00000403904 ZNF600Q6ZNG1 722 aa25.48■■□□□ 1.67
CSNK1E-204ENST00000403904 YIF1AO95070 293 aa25.47■■□□□ 1.67
CSNK1E-204ENST00000403904 YPEL3P61236 119 aaPredicted RBP25.47■■□□□ 1.67
CSNK1E-204ENST00000403904 FAM106AQ4KMX7 169 aa25.47■■□□□ 1.67
CSNK1E-204ENST00000403904 UNQ9165/PRO28630Q6UXU0 137 aa25.47■■□□□ 1.67
CSNK1E-204ENST00000403904 PUS1Q9Y606 427 aaKnown RBP eCLIP25.47■■□□□ 1.67
CSNK1E-204ENST00000403904 IGHV3OR16-8A0A075B7F1 116 aa25.46■■□□□ 1.67
CSNK1E-204ENST00000403904 ZNF320A2RRD8 509 aa25.46■■□□□ 1.67
CSNK1E-204ENST00000403904 DFFBO76075 338 aa25.46■■□□□ 1.67
CSNK1E-204ENST00000403904 EIF2B2P49770 351 aaKnown RBP25.46■■□□□ 1.67
CSNK1E-204ENST00000403904 ZFP69Q49AA0 526 aa25.46■■□□□ 1.67
CSNK1E-204ENST00000403904 LINC00482Q8N8I6 264 aa25.46■■□□□ 1.67
CSNK1E-204ENST00000403904 RCC1LQ96I51 464 aaKnown RBP25.46■■□□□ 1.67
CSNK1E-204ENST00000403904 NDUFA4O00483 81 aa25.45■■□□□ 1.66
CSNK1E-204ENST00000403904 RD3LP0DJH9 198 aa25.45■■□□□ 1.66
CSNK1E-204ENST00000403904 CXCL2P19875 107 aa25.45■■□□□ 1.66
CSNK1E-204ENST00000403904 OR2F1Q13607 317 aa25.45■■□□□ 1.66
CSNK1E-204ENST00000403904 BTNL8Q6UX41 500 aa25.45■■□□□ 1.66
CSNK1E-204ENST00000403904 C1QL4Q86Z23 238 aa25.45■■□□□ 1.66
CSNK1E-204ENST00000403904 HYLS1Q96M11 299 aa25.45■■□□□ 1.66
CSNK1E-204ENST00000403904 MGST2Q99735 147 aa25.45■■□□□ 1.66
CSNK1E-204ENST00000403904 PSG1P11464 419 aa25.44■■□□□ 1.66
CSNK1E-204ENST00000403904 FGF7P21781 194 aa25.44■■□□□ 1.66
CSNK1E-204ENST00000403904 TOMM20LQ6UXN7 152 aa25.44■■□□□ 1.66
CSNK1E-204ENST00000403904 TMEM182Q6ZP80 229 aaPredicted RBP25.44■■□□□ 1.66
CSNK1E-204ENST00000403904 TOMM40O96008 361 aa25.44■■□□□ 1.66
CSNK1E-204ENST00000403904 GATA2P23769 480 aaPredicted RBP25.44■■□□□ 1.66
CSNK1E-204ENST00000403904 ZNF345Q14585 488 aa25.44■■□□□ 1.66
CSNK1E-204ENST00000403904 Q8WTZ3 238 aa25.44■■□□□ 1.66
CSNK1E-204ENST00000403904 AGPAT2O15120 278 aa25.43■■□□□ 1.66
CSNK1E-204ENST00000403904 CYP2G1PQ6ZSU1 146 aa25.43■■□□□ 1.66
CSNK1E-204ENST00000403904 KCNRGQ8N5I3 272 aa25.43■■□□□ 1.66
CSNK1E-204ENST00000403904 C20orf24Q9BUV8 137 aa25.43■■□□□ 1.66
CSNK1E-204ENST00000403904 TMEM190Q8WZ59 177 aa25.42■■□□□ 1.66
CSNK1E-204ENST00000403904 WDR61Q9GZS3 305 aaKnown RBP25.42■■□□□ 1.66
CSNK1E-204ENST00000403904 OVOL1O14753 267 aa25.41■■□□□ 1.66
CSNK1E-204ENST00000403904 IFNA5P01569 189 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms