RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 DLX1P56177 255 aa13.34□□□□□ -0.27
PHTF1-205ENST00000393357 TMEM177Q53S58 311 aa13.34□□□□□ -0.27
PHTF1-205ENST00000393357 BVES-AS1Q5T3Y7 98 aa13.34□□□□□ -0.27
PHTF1-205ENST00000393357 SMIM15Q7Z3B0 74 aa13.34□□□□□ -0.27
PHTF1-205ENST00000393357 IDI2-AS1Q9NZ38 188 aa13.34□□□□□ -0.27
PHTF1-205ENST00000393357 C15orf65H3BRN8 121 aa13.34□□□□□ -0.27
PHTF1-205ENST00000393357 DAZAP1Q96EP5 407 aaKnown RBP13.34□□□□□ -0.27
PHTF1-205ENST00000393357 CALYQ9NYX4 217 aa13.34□□□□□ -0.27
PHTF1-205ENST00000393357 IGHV1-24A0A0C4DH33 117 aa13.33□□□□□ -0.28
PHTF1-205ENST00000393357 SERTM2A0A1B0GWG4 89 aa13.33□□□□□ -0.28
PHTF1-205ENST00000393357 SMIM27A0A1W2PRY6 76 aa13.33□□□□□ -0.28
PHTF1-205ENST00000393357 H3BUT2 72 aa13.33□□□□□ -0.28
PHTF1-205ENST00000393357 Q5PR19 223 aa13.33□□□□□ -0.28
PHTF1-205ENST00000393357 MRPL52Q86TS9 123 aaKnown RBP13.33□□□□□ -0.28
PHTF1-205ENST00000393357 GAGE10A6NGK3 116 aa13.33□□□□□ -0.28
PHTF1-205ENST00000393357 PRR20EP86478 221 aa13.33□□□□□ -0.28
PHTF1-205ENST00000393357 PRR20CP86479 221 aa13.33□□□□□ -0.28
PHTF1-205ENST00000393357 PRR20DP86480 221 aa13.33□□□□□ -0.28
PHTF1-205ENST00000393357 PRR20BP86481 221 aa13.33□□□□□ -0.28
PHTF1-205ENST00000393357 PRR20AP86496 221 aa13.33□□□□□ -0.28
PHTF1-205ENST00000393357 C11orf52Q96A22 123 aa13.33□□□□□ -0.28
PHTF1-205ENST00000393357 ZPBPQ9BS86 351 aa13.33□□□□□ -0.28
PHTF1-205ENST00000393357 ZGRF1Q86YA3 2104 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 SYS1-DBNDD2H3BUS1 97 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 TOMM40O96008 361 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 CCL13Q99616 98 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 SLC25A33Q9BSK2 321 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 COMMD5Q9GZQ3 224 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 CXXC4Q9H2H0 198 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 SPRR3Q9UBC9 169 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 H0YJW9 148 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 K7ESF4 209 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 SP1P08047 785 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 AARDQ4LEZ3 155 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 URB1-AS1Q96HZ7 61 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 TMUB1Q9BVT8 246 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 TRAV30A0A087WSZ9 112 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 C7orf71A4D174 169 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 PEX7O00628 323 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 ENSAO43768 121 aaKnown RBP13.32□□□□□ -0.28
PHTF1-205ENST00000393357 ADH4P08319 380 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 RPL24P83731 157 aaKnown RBP13.32□□□□□ -0.28
PHTF1-205ENST00000393357 OR2V2Q96R30 315 aa13.32□□□□□ -0.28
PHTF1-205ENST00000393357 PTPRZ1P23471 2315 aaPredicted RBP13.31□□□□□ -0.28
PHTF1-205ENST00000393357 TRGV5A0A0B4J1U4 118 aa13.31□□□□□ -0.28
PHTF1-205ENST00000393357 HTR1DP28221 377 aa13.31□□□□□ -0.28
PHTF1-205ENST00000393357 ARF6P62330 175 aa13.31□□□□□ -0.28
PHTF1-205ENST00000393357 C10orf113Q5VZT2 155 aa13.31□□□□□ -0.28
PHTF1-205ENST00000393357 TRAV9-1A0A075B6T8 112 aa13.31□□□□□ -0.28
PHTF1-205ENST00000393357 LINC00305Q7Z4B0 112 aa13.31□□□□□ -0.28
PHTF1-205ENST00000393357 CIARTQ8N365 385 aaPredicted RBP13.31□□□□□ -0.28
PHTF1-205ENST00000393357 FAM216BQ8N7L0 139 aa13.31□□□□□ -0.28
PHTF1-205ENST00000393357 TNRC6AQ8NDV7 1962 aaKnown RBP13.31□□□□□ -0.28
PHTF1-205ENST00000393357 CORO2AQ92828 525 aa13.31□□□□□ -0.28
PHTF1-205ENST00000393357 HES4Q9HCC6 221 aa13.31□□□□□ -0.28
PHTF1-205ENST00000393357 hADV38S2A0JD32 116 aa13.3□□□□□ -0.28
PHTF1-205ENST00000393357 FAM231BA6NCW3 169 aa13.3□□□□□ -0.28
PHTF1-205ENST00000393357 CECR9P0C854 216 aa13.3□□□□□ -0.28
PHTF1-205ENST00000393357 SSPNQ14714 243 aa13.3□□□□□ -0.28
PHTF1-205ENST00000393357 NRN1LQ496H8 165 aa13.3□□□□□ -0.28
PHTF1-205ENST00000393357 MRPL36Q9P0J6 103 aaKnown RBP13.3□□□□□ -0.28
PHTF1-205ENST00000393357 ACACAQ13085 2346 aa13.3□□□□□ -0.28
PHTF1-205ENST00000393357 K7EP13 123 aa13.3□□□□□ -0.28
PHTF1-205ENST00000393357 ZZEF1O43149 2961 aa13.3□□□□□ -0.28
PHTF1-205ENST00000393357 P01737 135 aa13.3□□□□□ -0.28
PHTF1-205ENST00000393357 PRNTQ86SH4 94 aa13.3□□□□□ -0.28
PHTF1-205ENST00000393357 SLC25A2Q9BXI2 301 aa13.3□□□□□ -0.28
PHTF1-205ENST00000393357 ADAMTS20P59510 1910 aa13.29□□□□□ -0.28
PHTF1-205ENST00000393357 SAA1P0DJI8 122 aaPredicted RBP13.29□□□□□ -0.28
PHTF1-205ENST00000393357 IGF2BP2-AS1Q96M15 143 aa13.29□□□□□ -0.28
PHTF1-205ENST00000393357 MAP1LC3CQ9BXW4 147 aa13.29□□□□□ -0.28
PHTF1-205ENST00000393357 TMEM191AQ9H0A3 160 aa13.29□□□□□ -0.28
PHTF1-205ENST00000393357 S4R3C0 116 aa13.29□□□□□ -0.28
PHTF1-205ENST00000393357 IQCF6A8MYZ5 107 aa13.29□□□□□ -0.28
PHTF1-205ENST00000393357 NHLH1Q02575 133 aa13.29□□□□□ -0.28
PHTF1-205ENST00000393357 DIAPH2-AS1Q14236 149 aa13.29□□□□□ -0.28
PHTF1-205ENST00000393357 RUSC1-AS1Q66K80 236 aa13.29□□□□□ -0.28
PHTF1-205ENST00000393357 MTURNQ8N3F0 131 aa13.29□□□□□ -0.28
PHTF1-205ENST00000393357 HARBI1Q96MB7 349 aa13.29□□□□□ -0.28
PHTF1-205ENST00000393357 TEX50A0A1B0GTY4 177 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 NCR2O95944 276 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 OR5AL1P0C617 328 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 FAM106CPP0CH98 169 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 ACP1P24666 158 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 COL8A1P27658 744 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 NMUP48645 174 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 FAM106AQ4KMX7 169 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 LRRC10Q5BKY1 277 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 DSCAML1Q8TD84 2053 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 DSCAMO60469 2012 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 GNG7O60262 68 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 FAM87AP0C7U9 286 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 BPIFB3P59826 476 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 PDPNQ86YL7 162 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 M0R1B8 84 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 LOXL3P58215 753 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 HBBP68871 147 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 ITLN1Q8WWA0 313 aa13.28□□□□□ -0.28
PHTF1-205ENST00000393357 TTC28Q96AY4 2481 aa13.27□□□□□ -0.28
PHTF1-205ENST00000393357 SPTAN1Q13813 2472 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms