RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PSG7Q13046 419 aa16.36■□□□□ 0.21
SHANK1-203ENST00000391813 OCIAD2Q56VL3 154 aa16.36■□□□□ 0.21
SHANK1-203ENST00000391813 ZSWIM8A7E2V4 1837 aa16.36■□□□□ 0.21
SHANK1-203ENST00000391813 SYS1-DBNDD2H3BUS1 97 aa16.36■□□□□ 0.21
SHANK1-203ENST00000391813 CRIM1Q9NZV1 1036 aa16.36■□□□□ 0.21
SHANK1-203ENST00000391813 A8MWV9 139 aa16.36■□□□□ 0.21
SHANK1-203ENST00000391813 PSG1P11464 419 aa16.36■□□□□ 0.21
SHANK1-203ENST00000391813 MSRB2Q9Y3D2 182 aa16.35■□□□□ 0.21
SHANK1-203ENST00000391813 RFPL3SP0C7P2 107 aa16.35■□□□□ 0.21
SHANK1-203ENST00000391813 GNG5P63218 68 aa16.35■□□□□ 0.21
SHANK1-203ENST00000391813 GEMIN7Q9H840 131 aaKnown RBP16.35■□□□□ 0.21
SHANK1-203ENST00000391813 MPDZO75970 2070 aa16.35■□□□□ 0.21
SHANK1-203ENST00000391813 TRBV6-6A0A0A6YYG2 114 aa16.35■□□□□ 0.21
SHANK1-203ENST00000391813 NPPCP23582 126 aa16.35■□□□□ 0.21
SHANK1-203ENST00000391813 WFDC3Q8IUB2 231 aa16.35■□□□□ 0.21
SHANK1-203ENST00000391813 RALGAPA1Q6GYQ0 2036 aa16.35■□□□□ 0.21
SHANK1-203ENST00000391813 NPSP0C0P6 89 aa16.35■□□□□ 0.21
SHANK1-203ENST00000391813 OR9G9P0C7N8 305 aa16.35■□□□□ 0.21
SHANK1-203ENST00000391813 MORN2Q502X0 79 aa16.35■□□□□ 0.21
SHANK1-203ENST00000391813 ZNF318Q5VUA4 2279 aa16.35■□□□□ 0.21
SHANK1-203ENST00000391813 B9A039 149 aa16.34■□□□□ 0.21
SHANK1-203ENST00000391813 UNQ6494/PRO21346Q6UXR6 183 aa16.34■□□□□ 0.21
SHANK1-203ENST00000391813 CST9LQ9H4G1 147 aa16.34■□□□□ 0.21
SHANK1-203ENST00000391813 ANAPC10Q9UM13 185 aa16.34■□□□□ 0.21
SHANK1-203ENST00000391813 IGKCP01834 107 aa16.34■□□□□ 0.21
SHANK1-203ENST00000391813 FABP5P3A8MUU1 101 aa16.34■□□□□ 0.21
SHANK1-203ENST00000391813 PYYP10082 97 aa16.34■□□□□ 0.21
SHANK1-203ENST00000391813 MMP23AO75900 390 aa16.33■□□□□ 0.21
SHANK1-203ENST00000391813 CKS1BP61024 79 aa16.33■□□□□ 0.21
SHANK1-203ENST00000391813 DCTN5Q9BTE1 182 aa16.33■□□□□ 0.21
SHANK1-203ENST00000391813 CACNA1BQ00975 2339 aa16.33■□□□□ 0.21
SHANK1-203ENST00000391813 SAA1P0DJI8 122 aaPredicted RBP16.33■□□□□ 0.2
SHANK1-203ENST00000391813 PAX2Q02962 417 aa16.33■□□□□ 0.2
SHANK1-203ENST00000391813 A0A1B0GWJ7 208 aa16.33■□□□□ 0.2
SHANK1-203ENST00000391813 ASCL2Q99929 193 aa16.33■□□□□ 0.2
SHANK1-203ENST00000391813 NDUFA3O95167 84 aa16.33■□□□□ 0.2
SHANK1-203ENST00000391813 FHL1Q13642 323 aa16.32■□□□□ 0.2
SHANK1-203ENST00000391813 GUSBP1Q15486 140 aa16.32■□□□□ 0.2
SHANK1-203ENST00000391813 PIMREGQ9BSJ6 248 aa16.32■□□□□ 0.2
SHANK1-203ENST00000391813 SIP14410 1827 aa16.32■□□□□ 0.2
SHANK1-203ENST00000391813 IGKV1-27A0A075B6S5 117 aa16.32■□□□□ 0.2
SHANK1-203ENST00000391813 IGLC2P0DOY2 106 aa16.32■□□□□ 0.2
SHANK1-203ENST00000391813 IGLC3P0DOY3 106 aa16.32■□□□□ 0.2
SHANK1-203ENST00000391813 BCL6BQ8N143 479 aaPredicted RBP16.32■□□□□ 0.2
SHANK1-203ENST00000391813 PSG8Q9UQ74 426 aa16.32■□□□□ 0.2
SHANK1-203ENST00000391813 VWA8A3KMH1 1905 aa16.32■□□□□ 0.2
SHANK1-203ENST00000391813 A0A087X0K7 114 aa16.32■□□□□ 0.2
SHANK1-203ENST00000391813 ATP5J2P56134 94 aa16.32■□□□□ 0.2
SHANK1-203ENST00000391813 GAGE2BQ13066 116 aa16.32■□□□□ 0.2
SHANK1-203ENST00000391813 MAJINQ3KP22 176 aa16.32■□□□□ 0.2
SHANK1-203ENST00000391813 GAGE2EQ4V326 116 aa16.32■□□□□ 0.2
SHANK1-203ENST00000391813 TMEM42Q69YG0 159 aa16.32■□□□□ 0.2
SHANK1-203ENST00000391813 RPRMLQ8N4K4 120 aa16.32■□□□□ 0.2
SHANK1-203ENST00000391813 GAGE2DQ9UEU5 116 aa16.32■□□□□ 0.2
SHANK1-203ENST00000391813 MUC21A0A0G2JKD1 596 aa16.31■□□□□ 0.2
SHANK1-203ENST00000391813 MUC21A0A140T8X8 626 aa16.31■□□□□ 0.2
SHANK1-203ENST00000391813 hDV102S1A0JD36 115 aa16.31■□□□□ 0.2
SHANK1-203ENST00000391813 MUC21Q5SSG8 566 aa16.31■□□□□ 0.2
SHANK1-203ENST00000391813 ARHGEF17Q96PE2 2063 aaPredicted RBP16.31■□□□□ 0.2
SHANK1-203ENST00000391813 PPIAL4CA0A0B4J2A2 164 aa16.31■□□□□ 0.2
SHANK1-203ENST00000391813 PPIAL4GP0DN37 164 aa16.31■□□□□ 0.2
SHANK1-203ENST00000391813 NABP1Q96AH0 204 aa16.31■□□□□ 0.2
SHANK1-203ENST00000391813 LINC01549A6NIU2 74 aa16.31■□□□□ 0.2
SHANK1-203ENST00000391813 ASIPP42127 132 aa16.31■□□□□ 0.2
SHANK1-203ENST00000391813 SRSF1Q07955 248 aaKnown RBP eCLIP16.31■□□□□ 0.2
SHANK1-203ENST00000391813 VOPP1Q96AW1 172 aa16.31■□□□□ 0.2
SHANK1-203ENST00000391813 LINC00312Q9Y6C7 94 aa16.31■□□□□ 0.2
SHANK1-203ENST00000391813 PI4KAP42356 2102 aa16.31■□□□□ 0.2
SHANK1-203ENST00000391813 SAA2-SAA4A0A096LPE2 208 aa16.31■□□□□ 0.2
SHANK1-203ENST00000391813 SAA2P0DJI9 122 aaPredicted RBP16.31■□□□□ 0.2
SHANK1-203ENST00000391813 TDGF1P13385 188 aa16.31■□□□□ 0.2
SHANK1-203ENST00000391813 FAM159AQ6UWV7 190 aa16.31■□□□□ 0.2
SHANK1-203ENST00000391813 PDLIM4P50479 330 aa16.3■□□□□ 0.2
SHANK1-203ENST00000391813 MEIG1Q5JSS6 88 aa16.3■□□□□ 0.2
SHANK1-203ENST00000391813 ZFAND6Q6FIF0 208 aa16.3■□□□□ 0.2
SHANK1-203ENST00000391813 SEPSECSQ9HD40 501 aaKnown RBP16.3■□□□□ 0.2
SHANK1-203ENST00000391813 PNRC2Q9NPJ4 139 aaKnown RBP16.3■□□□□ 0.2
SHANK1-203ENST00000391813 MDC1Q14676 2089 aaKnown RBP16.3■□□□□ 0.2
SHANK1-203ENST00000391813 YPEL3P61236 119 aaPredicted RBP16.3■□□□□ 0.2
SHANK1-203ENST00000391813 PVRIGQ6DKI7 326 aa16.3■□□□□ 0.2
SHANK1-203ENST00000391813 ORMDL2Q53FV1 153 aa16.3■□□□□ 0.2
SHANK1-203ENST00000391813 MGST2Q99735 147 aa16.3■□□□□ 0.2
SHANK1-203ENST00000391813 MRPL20Q9BYC9 149 aaKnown RBP16.3■□□□□ 0.2
SHANK1-203ENST00000391813 GTSF1LQ9H1H1 148 aa16.3■□□□□ 0.2
SHANK1-203ENST00000391813 ANK1P16157 1881 aa16.3■□□□□ 0.2
SHANK1-203ENST00000391813 M0R381 172 aa16.3■□□□□ 0.2
SHANK1-203ENST00000391813 CECR9P0C854 216 aa16.3■□□□□ 0.2
SHANK1-203ENST00000391813 NBL1P41271 181 aa16.3■□□□□ 0.2
SHANK1-203ENST00000391813 VKORC1Q9BQB6 163 aa16.29■□□□□ 0.2
SHANK1-203ENST00000391813 E9PLN8 166 aa16.29■□□□□ 0.2
SHANK1-203ENST00000391813 CELA3AP09093 270 aa16.29■□□□□ 0.2
SHANK1-203ENST00000391813 NUP35Q8NFH5 326 aa16.29■□□□□ 0.2
SHANK1-203ENST00000391813 RNASE6Q93091 150 aaKnown RBP16.29■□□□□ 0.2
SHANK1-203ENST00000391813 H7C1H1 209 aa16.29■□□□□ 0.2
SHANK1-203ENST00000391813 APOBEC3AP31941 199 aaPredicted RBP16.29■□□□□ 0.2
SHANK1-203ENST00000391813 KIR3DS1Q14943 382 aa16.29■□□□□ 0.2
SHANK1-203ENST00000391813 C21orf62Q9NYP8 219 aa16.29■□□□□ 0.2
SHANK1-203ENST00000391813 FOXA2Q9Y261 457 aaPredicted RBP16.29■□□□□ 0.2
SHANK1-203ENST00000391813 ZNF56Q15929 161 aa16.29■□□□□ 0.2
SHANK1-203ENST00000391813 OR10W1Q8NGF6 305 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms