RNA–Protein interactions for RNA: ENST00000378746.8

KIF3A-202, Transcript of kinesin family member 3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene KIF3A, Length 6,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-202ENST00000378746 CSRP2Q16527 193 aa12.95□□□□□ -0.34
KIF3A-202ENST00000378746 CLEC19AQ6UXS0 136 aa12.95□□□□□ -0.34
KIF3A-202ENST00000378746 FNDC4Q9H6D8 234 aaPredicted RBP12.95□□□□□ -0.34
KIF3A-202ENST00000378746 S4R3C0 116 aa12.95□□□□□ -0.34
KIF3A-202ENST00000378746 MUC21A0A0G2JKD1 596 aa12.95□□□□□ -0.34
KIF3A-202ENST00000378746 MUC21A0A140T8X8 626 aa12.95□□□□□ -0.34
KIF3A-202ENST00000378746 MUC21Q5SSG8 566 aa12.95□□□□□ -0.34
KIF3A-202ENST00000378746 TRGV9Q99603 122 aa12.95□□□□□ -0.34
KIF3A-202ENST00000378746 FAM90A2PQ658T7 463 aa12.95□□□□□ -0.34
KIF3A-202ENST00000378746 OR2K2Q8NGT1 345 aa12.95□□□□□ -0.34
KIF3A-202ENST00000378746 NHP2Q9NX24 153 aaKnown RBP12.95□□□□□ -0.34
KIF3A-202ENST00000378746 IGHV3OR16-13A0A075B7E8 117 aa12.94□□□□□ -0.34
KIF3A-202ENST00000378746 IGHV3-74A0A0B4J1X5 117 aa12.94□□□□□ -0.34
KIF3A-202ENST00000378746 TRAV21A0A0B4J279 112 aa12.94□□□□□ -0.34
KIF3A-202ENST00000378746 SPRR3Q9UBC9 169 aa12.94□□□□□ -0.34
KIF3A-202ENST00000378746 DOCK3Q8IZD9 2030 aa12.94□□□□□ -0.34
KIF3A-202ENST00000378746 IGHV3OR16-12A0A075B7B8 117 aa12.94□□□□□ -0.34
KIF3A-202ENST00000378746 IGHV3-66A0A0C4DH42 116 aa12.94□□□□□ -0.34
KIF3A-202ENST00000378746 Q6P435 159 aa12.94□□□□□ -0.34
KIF3A-202ENST00000378746 SPATA31B1PQ5VZV4 182 aa12.94□□□□□ -0.34
KIF3A-202ENST00000378746 RNF5Q99942 180 aa12.94□□□□□ -0.34
KIF3A-202ENST00000378746 APOMO95445 188 aa12.93□□□□□ -0.34
KIF3A-202ENST00000378746 RNASE4P34096 147 aaKnown RBP12.93□□□□□ -0.34
KIF3A-202ENST00000378746 SEC16AO15027 2179 aa12.93□□□□□ -0.34
KIF3A-202ENST00000378746 SPTBP11277 2137 aa12.93□□□□□ -0.34
KIF3A-202ENST00000378746 TMEM262E9PQX1 116 aa12.93□□□□□ -0.34
KIF3A-202ENST00000378746 HOXA3O43365 443 aaPredicted RBP12.93□□□□□ -0.34
KIF3A-202ENST00000378746 SPSB3Q6PJ21 355 aa12.93□□□□□ -0.34
KIF3A-202ENST00000378746 CYSLTR1Q9Y271 337 aa12.93□□□□□ -0.34
KIF3A-202ENST00000378746 GZMBP10144 247 aa12.93□□□□□ -0.34
KIF3A-202ENST00000378746 ZNF585BQ52M93 769 aa12.93□□□□□ -0.34
KIF3A-202ENST00000378746 C10orf91Q5T1B1 145 aa12.93□□□□□ -0.34
KIF3A-202ENST00000378746 YAE1D1Q9NRH1 226 aa12.93□□□□□ -0.34
KIF3A-202ENST00000378746 ATP5J2P56134 94 aa12.93□□□□□ -0.34
KIF3A-202ENST00000378746 ARTNQ5T4W7 220 aa12.93□□□□□ -0.34
KIF3A-202ENST00000378746 TMEM167AQ8TBQ9 72 aa12.93□□□□□ -0.34
KIF3A-202ENST00000378746 CHTOPQ9Y3Y2 248 aaKnown RBP12.93□□□□□ -0.34
KIF3A-202ENST00000378746 TRAV5A0A0B4J249 113 aa12.92□□□□□ -0.34
KIF3A-202ENST00000378746 IGHV1-46P01743 117 aa12.92□□□□□ -0.34
KIF3A-202ENST00000378746 A6NNC1 897 aa12.92□□□□□ -0.34
KIF3A-202ENST00000378746 SIGMAR1Q99720 223 aa12.92□□□□□ -0.34
KIF3A-202ENST00000378746 CCL19Q99731 98 aa12.92□□□□□ -0.34
KIF3A-202ENST00000378746 SEPSECSQ9HD40 501 aaKnown RBP12.92□□□□□ -0.34
KIF3A-202ENST00000378746 LDLRAD2Q5SZI1 272 aa12.91□□□□□ -0.34
KIF3A-202ENST00000378746 FAM71F2Q6NXP2 309 aa12.91□□□□□ -0.34
KIF3A-202ENST00000378746 TMEM256Q8N2U0 113 aa12.91□□□□□ -0.34
KIF3A-202ENST00000378746 SCN2AQ99250 2005 aa12.91□□□□□ -0.34
KIF3A-202ENST00000378746 IGHV3-49A0A0A0MS15 119 aa12.91□□□□□ -0.34
KIF3A-202ENST00000378746 TYMSP04818 313 aa12.91□□□□□ -0.34
KIF3A-202ENST00000378746 TCRAP04437 139 aa12.91□□□□□ -0.34
KIF3A-202ENST00000378746 SAMD5Q5TGI4 173 aa12.91□□□□□ -0.34
KIF3A-202ENST00000378746 PLSCR4Q9NRQ2 329 aa12.91□□□□□ -0.34
KIF3A-202ENST00000378746 OVOL1O14753 267 aa12.91□□□□□ -0.34
KIF3A-202ENST00000378746 PSPNO60542 156 aa12.91□□□□□ -0.34
KIF3A-202ENST00000378746 IFI27P40305 119 aaPredicted RBP12.91□□□□□ -0.34
KIF3A-202ENST00000378746 CENPVQ7Z7K6 275 aaPredicted RBP12.91□□□□□ -0.34
KIF3A-202ENST00000378746 RPRMLQ8N4K4 120 aa12.9□□□□□ -0.34
KIF3A-202ENST00000378746 SLC25A39Q9BZJ4 359 aaPredicted RBP12.9□□□□□ -0.34
KIF3A-202ENST00000378746 MEGF9Q9H1U4 602 aa12.9□□□□□ -0.34
KIF3A-202ENST00000378746 KLHDC3Q9BQ90 382 aa12.9□□□□□ -0.34
KIF3A-202ENST00000378746 TFF1P04155 84 aa12.9□□□□□ -0.34
KIF3A-202ENST00000378746 Q0VG73 95 aa12.9□□□□□ -0.34
KIF3A-202ENST00000378746 RNF144BQ7Z419 303 aa12.9□□□□□ -0.34
KIF3A-202ENST00000378746 ZNF479Q96JC4 524 aa12.9□□□□□ -0.34
KIF3A-202ENST00000378746 C15orf62A8K5M9 175 aa12.9□□□□□ -0.34
KIF3A-202ENST00000378746 OR10W1Q8NGF6 305 aa12.9□□□□□ -0.34
KIF3A-202ENST00000378746 C5orf63A6NC05 138 aa12.9□□□□□ -0.35
KIF3A-202ENST00000378746 C3orf79P0CE67 100 aa12.9□□□□□ -0.35
KIF3A-202ENST00000378746 ZNF664Q8N3J9 261 aa12.9□□□□□ -0.35
KIF3A-202ENST00000378746 DUSP14O95147 198 aaKnown RBP12.89□□□□□ -0.35
KIF3A-202ENST00000378746 LYPD1Q8N2G4 141 aa12.89□□□□□ -0.35
KIF3A-202ENST00000378746 CD177Q8N6Q3 437 aa12.89□□□□□ -0.35
KIF3A-202ENST00000378746 MBNL3Q9NUK0 354 aaKnown RBP12.89□□□□□ -0.35
KIF3A-202ENST00000378746 TDRD6O60522 2096 aaKnown RBP12.89□□□□□ -0.35
KIF3A-202ENST00000378746 MYOD1P15172 320 aa12.89□□□□□ -0.35
KIF3A-202ENST00000378746 DUX3Q96PT4 197 aa12.89□□□□□ -0.35
KIF3A-202ENST00000378746 LAGE3Q14657 143 aa12.89□□□□□ -0.35
KIF3A-202ENST00000378746 NUP35Q8NFH5 326 aa12.89□□□□□ -0.35
KIF3A-202ENST00000378746 RNASE6Q93091 150 aaKnown RBP12.89□□□□□ -0.35
KIF3A-202ENST00000378746 RFNGQ9Y644 331 aa12.89□□□□□ -0.35
KIF3A-202ENST00000378746 GFRA3O60609 400 aa12.89□□□□□ -0.35
KIF3A-202ENST00000378746 OR13C6PQ8NH95 151 aa12.89□□□□□ -0.35
KIF3A-202ENST00000378746 DMRTA2Q96SC8 542 aa12.89□□□□□ -0.35
KIF3A-202ENST00000378746 GFRA4Q9GZZ7 299 aa12.89□□□□□ -0.35
KIF3A-202ENST00000378746 IGKV3-20P01619 116 aa12.89□□□□□ -0.35
KIF3A-202ENST00000378746 SBF1O95248 1867 aa12.88□□□□□ -0.35
KIF3A-202ENST00000378746 ITGB1BP1O14713 200 aa12.88□□□□□ -0.35
KIF3A-202ENST00000378746 NTF4P34130 210 aa12.88□□□□□ -0.35
KIF3A-202ENST00000378746 A0A1B0GWJ7 208 aa12.88□□□□□ -0.35
KIF3A-202ENST00000378746 VKORC1Q9BQB6 163 aa12.88□□□□□ -0.35
KIF3A-202ENST00000378746 ETV2O00321 342 aaPredicted RBP12.87□□□□□ -0.35
KIF3A-202ENST00000378746 TDGF1P3P51864 188 aa12.87□□□□□ -0.35
KIF3A-202ENST00000378746 FOXG1P55316 489 aaPredicted RBP12.87□□□□□ -0.35
KIF3A-202ENST00000378746 B3GALT5-AS1P59052 145 aa12.87□□□□□ -0.35
KIF3A-202ENST00000378746 C20orf144Q9BQM9 153 aa12.87□□□□□ -0.35
KIF3A-202ENST00000378746 MESP1Q9BRJ9 268 aa12.87□□□□□ -0.35
KIF3A-202ENST00000378746 RBMY1BA6NDE4 496 aaKnown RBP12.87□□□□□ -0.35
KIF3A-202ENST00000378746 RBMY1EA6NEQ0 496 aaKnown RBP12.87□□□□□ -0.35
KIF3A-202ENST00000378746 RBMY1DP0C7P1 496 aaKnown RBP12.87□□□□□ -0.35
KIF3A-202ENST00000378746 RBMY1A1P0DJD3 496 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms