RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 Q6ZR03 302 aa13.44□□□□□ -0.26
SCAF1-201ENST00000360565 KCNS1Q96KK3 526 aa13.44□□□□□ -0.26
SCAF1-201ENST00000360565 ATG101Q9BSB4 218 aa13.44□□□□□ -0.26
SCAF1-201ENST00000360565 RPP21Q9H633 154 aaKnown RBP13.44□□□□□ -0.26
SCAF1-201ENST00000360565 ANKHD1Q8IWZ3 2542 aaKnown RBP13.44□□□□□ -0.26
SCAF1-201ENST00000360565 TMEM200BQ69YZ2 307 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 SSC4DQ8WTU2 575 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 TMEM208Q9BTX3 173 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 NRN1Q9NPD7 142 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 TECTAO75443 2155 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 LMO1P25800 156 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 TFPI2P48307 235 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 SCGB1D4Q6XE38 83 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 ZNF841Q6ZN19 808 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 TMEM70Q9BUB7 260 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 EPDR1Q9UM22 224 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 A0A1B0GUT8 65 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 HLA-DRB1P01911 266 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 RNF224P0DH78 156 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 ERVK11-1P61568 191 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 LY6EQ16553 131 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 MLANAQ16655 118 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 C2orf83Q53S99 150 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 TMEM136Q6ZRR5 245 aa13.43□□□□□ -0.26
SCAF1-201ENST00000360565 ARFGEF3Q5TH69 2177 aa13.42□□□□□ -0.26
SCAF1-201ENST00000360565 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.42□□□□□ -0.26
SCAF1-201ENST00000360565 SIAH2O43255 324 aa13.42□□□□□ -0.26
SCAF1-201ENST00000360565 IGKV1-16P04430 117 aa13.42□□□□□ -0.26
SCAF1-201ENST00000360565 FBXL7Q9UJT9 491 aa13.42□□□□□ -0.26
SCAF1-201ENST00000360565 SAPCD1Q5SSQ6 148 aa13.42□□□□□ -0.26
SCAF1-201ENST00000360565 NDUFAF3Q9BU61 184 aa13.42□□□□□ -0.26
SCAF1-201ENST00000360565 A6NDN8 102 aa13.42□□□□□ -0.26
SCAF1-201ENST00000360565 C10orf91Q5T1B1 145 aa13.42□□□□□ -0.26
SCAF1-201ENST00000360565 LTBP2Q14767 1821 aa13.41□□□□□ -0.26
SCAF1-201ENST00000360565 ZNF207O43670 478 aaKnown RBP13.41□□□□□ -0.26
SCAF1-201ENST00000360565 NPPCP23582 126 aa13.41□□□□□ -0.26
SCAF1-201ENST00000360565 CX3CL1P78423 397 aa13.41□□□□□ -0.26
SCAF1-201ENST00000360565 FOXL1Q12952 345 aa13.41□□□□□ -0.26
SCAF1-201ENST00000360565 IGHV3-66A0A0C4DH42 116 aa13.41□□□□□ -0.26
SCAF1-201ENST00000360565 PRB4P10163 310 aaPredicted RBP13.41□□□□□ -0.26
SCAF1-201ENST00000360565 Q1RN00 199 aa13.41□□□□□ -0.26
SCAF1-201ENST00000360565 Q6ZS92 163 aa13.41□□□□□ -0.26
SCAF1-201ENST00000360565 RPRMLQ8N4K4 120 aa13.41□□□□□ -0.26
SCAF1-201ENST00000360565 OR10J6PQ8NGY7 276 aa13.41□□□□□ -0.26
SCAF1-201ENST00000360565 GAFA1Q96PS6 74 aa13.41□□□□□ -0.26
SCAF1-201ENST00000360565 SCGB1C2P0DMR2 95 aa13.41□□□□□ -0.26
SCAF1-201ENST00000360565 UQCRFS1P47985 274 aa13.41□□□□□ -0.26
SCAF1-201ENST00000360565 RPS20P60866 119 aaKnown RBP13.41□□□□□ -0.26
SCAF1-201ENST00000360565 RPL24P83731 157 aaKnown RBP13.41□□□□□ -0.26
SCAF1-201ENST00000360565 ZNRD1Q9P1U0 126 aa13.41□□□□□ -0.26
SCAF1-201ENST00000360565 TMEM178BH3BS89 294 aa13.4□□□□□ -0.26
SCAF1-201ENST00000360565 TIMM23O14925 209 aa13.4□□□□□ -0.26
SCAF1-201ENST00000360565 NBR2O15453 112 aa13.4□□□□□ -0.26
SCAF1-201ENST00000360565 GPR183P32249 361 aa13.4□□□□□ -0.26
SCAF1-201ENST00000360565 C12orf54Q6X4T0 127 aa13.4□□□□□ -0.26
SCAF1-201ENST00000360565 TMEM256Q8N2U0 113 aa13.4□□□□□ -0.26
SCAF1-201ENST00000360565 ARPC1AQ92747 370 aa13.4□□□□□ -0.26
SCAF1-201ENST00000360565 FMC1Q96HJ9 113 aa13.4□□□□□ -0.26
SCAF1-201ENST00000360565 OR4C46A6NHA9 309 aa13.4□□□□□ -0.26
SCAF1-201ENST00000360565 RBPMS2Q6ZRY4 209 aaKnown RBP13.4□□□□□ -0.26
SCAF1-201ENST00000360565 SPACA3Q8IXA5 215 aa13.4□□□□□ -0.26
SCAF1-201ENST00000360565 MAP1LC3AQ9H492 121 aa13.4□□□□□ -0.26
SCAF1-201ENST00000360565 CUL9Q8IWT3 2517 aa13.4□□□□□ -0.26
SCAF1-201ENST00000360565 TM4SF20Q53R12 229 aa13.4□□□□□ -0.27
SCAF1-201ENST00000360565 PCNTO95613 3336 aa13.4□□□□□ -0.27
SCAF1-201ENST00000360565 LOC102724200A0A096LPH7 203 aaPredicted RBP13.39□□□□□ -0.27
SCAF1-201ENST00000360565 CDKN1AP38936 164 aa13.39□□□□□ -0.27
SCAF1-201ENST00000360565 ZNF600Q6ZNG1 722 aa13.39□□□□□ -0.27
SCAF1-201ENST00000360565 PARD6GQ9BYG4 376 aaPredicted RBP13.39□□□□□ -0.27
SCAF1-201ENST00000360565 KIR3DL3Q8N743 410 aa13.39□□□□□ -0.27
SCAF1-201ENST00000360565 A0A0G2JNJ9 132 aa13.39□□□□□ -0.27
SCAF1-201ENST00000360565 RAB9AP51151 201 aa13.39□□□□□ -0.27
SCAF1-201ENST00000360565 ZNF726P1Q15940 193 aa13.39□□□□□ -0.27
SCAF1-201ENST00000360565 Q8NFD4 153 aa13.39□□□□□ -0.27
SCAF1-201ENST00000360565 NEU4Q8WWR8 484 aaPredicted RBP13.39□□□□□ -0.27
SCAF1-201ENST00000360565 Q9UFV3 132 aa13.39□□□□□ -0.27
SCAF1-201ENST00000360565 IGHV1-8P0DP01 117 aa13.38□□□□□ -0.27
SCAF1-201ENST00000360565 ATP5J2P56134 94 aa13.38□□□□□ -0.27
SCAF1-201ENST00000360565 DLX6P56179 175 aa13.38□□□□□ -0.27
SCAF1-201ENST00000360565 VKORC1Q9BQB6 163 aa13.38□□□□□ -0.27
SCAF1-201ENST00000360565 PRDM13Q9H4Q3 707 aa13.38□□□□□ -0.27
SCAF1-201ENST00000360565 A0A1W2PS18 150 aa13.38□□□□□ -0.27
SCAF1-201ENST00000360565 AREGP15514 252 aa13.38□□□□□ -0.27
SCAF1-201ENST00000360565 ATP5G2Q06055 141 aa13.38□□□□□ -0.27
SCAF1-201ENST00000360565 SLC25A48Q6ZT89 311 aaKnown RBP13.38□□□□□ -0.27
SCAF1-201ENST00000360565 ST6GALNAC6Q969X2 333 aa13.38□□□□□ -0.27
SCAF1-201ENST00000360565 RNF125Q96EQ8 232 aa13.38□□□□□ -0.27
SCAF1-201ENST00000360565 APOHP02749 345 aaPredicted RBP13.38□□□□□ -0.27
SCAF1-201ENST00000360565 PRSS8Q16651 343 aa13.38□□□□□ -0.27
SCAF1-201ENST00000360565 TMEM167AQ8TBQ9 72 aa13.38□□□□□ -0.27
SCAF1-201ENST00000360565 GNB1LQ9BYB4 327 aa13.38□□□□□ -0.27
SCAF1-201ENST00000360565 FGF23Q9GZV9 251 aaPredicted RBP13.38□□□□□ -0.27
SCAF1-201ENST00000360565 H0YJW9 148 aa13.38□□□□□ -0.27
SCAF1-201ENST00000360565 SRSF9Q13242 221 aaKnown RBP eCLIP13.38□□□□□ -0.27
SCAF1-201ENST00000360565 ADIPOQQ15848 244 aa13.38□□□□□ -0.27
SCAF1-201ENST00000360565 COL25A1Q9BXS0 654 aaPredicted RBP13.38□□□□□ -0.27
SCAF1-201ENST00000360565 DCAF16Q9NXF7 216 aa13.38□□□□□ -0.27
SCAF1-201ENST00000360565 HAPLN4Q86UW8 402 aa13.37□□□□□ -0.27
SCAF1-201ENST00000360565 OTORQ9NRC9 128 aa13.37□□□□□ -0.27
SCAF1-201ENST00000360565 ZNF324O75467 553 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms