RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 SRIP30626 198 aa16.52■□□□□ 0.24
COL13A1-202ENST00000357811 C1orf194Q5T5A4 169 aa16.52■□□□□ 0.24
COL13A1-202ENST00000357811 CTSZQ9UBR2 303 aa16.52■□□□□ 0.24
COL13A1-202ENST00000357811 DLL1O00548 723 aa16.52■□□□□ 0.23
COL13A1-202ENST00000357811 SELENOTP62341 195 aa16.52■□□□□ 0.23
COL13A1-202ENST00000357811 TEX36Q5VZQ5 186 aa16.52■□□□□ 0.23
COL13A1-202ENST00000357811 WNK2Q9Y3S1 2297 aa16.52■□□□□ 0.23
COL13A1-202ENST00000357811 CNTFRP26992 372 aa16.51■□□□□ 0.23
COL13A1-202ENST00000357811 PATE2Q6UY27 113 aa16.51■□□□□ 0.23
COL13A1-202ENST00000357811 OSR1Q8TAX0 266 aaPredicted RBP16.51■□□□□ 0.23
COL13A1-202ENST00000357811 ZNF253O75346 499 aa16.51■□□□□ 0.23
COL13A1-202ENST00000357811 TOX4O94842 621 aa16.51■□□□□ 0.23
COL13A1-202ENST00000357811 ANKRD39Q53RE8 183 aa16.51■□□□□ 0.23
COL13A1-202ENST00000357811 IGFL3Q6UXB1 125 aa16.51■□□□□ 0.23
COL13A1-202ENST00000357811 IGFBPL1Q8WX77 278 aa16.51■□□□□ 0.23
COL13A1-202ENST00000357811 AMMECR1Q9Y4X0 333 aaPredicted RBP16.51■□□□□ 0.23
COL13A1-202ENST00000357811 SPTBN1Q01082 2364 aaKnown RBP16.51■□□□□ 0.23
COL13A1-202ENST00000357811 THBDP07204 575 aa16.5■□□□□ 0.23
COL13A1-202ENST00000357811 NTF3P20783 257 aa16.5■□□□□ 0.23
COL13A1-202ENST00000357811 AMTP48728 403 aa16.5■□□□□ 0.23
COL13A1-202ENST00000357811 PRR30Q53SZ7 412 aaPredicted RBP16.5■□□□□ 0.23
COL13A1-202ENST00000357811 C10orf113Q5VZT2 155 aa16.5■□□□□ 0.23
COL13A1-202ENST00000357811 ABHD17AQ96GS6 310 aa16.5■□□□□ 0.23
COL13A1-202ENST00000357811 PAXXQ9BUH6 204 aa16.5■□□□□ 0.23
COL13A1-202ENST00000357811 FBXL7Q9UJT9 491 aa16.5■□□□□ 0.23
COL13A1-202ENST00000357811 ISLRO14498 428 aa16.5■□□□□ 0.23
COL13A1-202ENST00000357811 NDUFB3O43676 98 aa16.5■□□□□ 0.23
COL13A1-202ENST00000357811 CRYABP02511 175 aaKnown RBP16.5■□□□□ 0.23
COL13A1-202ENST00000357811 CX3CL1P78423 397 aa16.5■□□□□ 0.23
COL13A1-202ENST00000357811 SIGLECL1Q8N7X8 197 aa16.5■□□□□ 0.23
COL13A1-202ENST00000357811 OR5AN1Q8NGI8 311 aa16.5■□□□□ 0.23
COL13A1-202ENST00000357811 OR4C13Q8NGP0 309 aa16.5■□□□□ 0.23
COL13A1-202ENST00000357811 OR1B1Q8NGR6 318 aa16.5■□□□□ 0.23
COL13A1-202ENST00000357811 NCOR1P1Q9H4R4 102 aa16.5■□□□□ 0.23
COL13A1-202ENST00000357811 COL6A6A6NMZ7 2263 aa16.5■□□□□ 0.23
COL13A1-202ENST00000357811 TPTE2P1Q5T6R2 138 aa16.5■□□□□ 0.23
COL13A1-202ENST00000357811 TMEM136Q6ZRR5 245 aa16.5■□□□□ 0.23
COL13A1-202ENST00000357811 TMEM178BH3BS89 294 aa16.49■□□□□ 0.23
COL13A1-202ENST00000357811 SSBP4Q9BWG4 385 aaPredicted RBP16.49■□□□□ 0.23
COL13A1-202ENST00000357811 LPAR2Q9HBW0 351 aa16.49■□□□□ 0.23
COL13A1-202ENST00000357811 DYNLRB1Q9NP97 96 aa16.49■□□□□ 0.23
COL13A1-202ENST00000357811 CORTO00230 105 aa16.49■□□□□ 0.23
COL13A1-202ENST00000357811 PRRG2O14669 202 aa16.49■□□□□ 0.23
COL13A1-202ENST00000357811 SIAH2O43255 324 aa16.49■□□□□ 0.23
COL13A1-202ENST00000357811 GPR6P46095 362 aaPredicted RBP16.49■□□□□ 0.23
COL13A1-202ENST00000357811 PPOXP50336 477 aa16.49■□□□□ 0.23
COL13A1-202ENST00000357811 LINC00305Q7Z4B0 112 aa16.49■□□□□ 0.23
COL13A1-202ENST00000357811 LINC00574Q9H8X3 128 aa16.49■□□□□ 0.23
COL13A1-202ENST00000357811 TBL2Q9Y4P3 447 aaKnown RBP16.49■□□□□ 0.23
COL13A1-202ENST00000357811 PTPRQQ9UMZ3 2332 aa16.48■□□□□ 0.23
COL13A1-202ENST00000357811 A0A1W2PPI3 338 aa16.48■□□□□ 0.23
COL13A1-202ENST00000357811 CAMPP49913 170 aa16.48■□□□□ 0.23
COL13A1-202ENST00000357811 IGF2BP2-AS1Q96M15 143 aa16.48■□□□□ 0.23
COL13A1-202ENST00000357811 PSMB11A5LHX3 300 aa16.47■□□□□ 0.23
COL13A1-202ENST00000357811 SLAQ13239 276 aa16.47■□□□□ 0.23
COL13A1-202ENST00000357811 LRRC10Q5BKY1 277 aa16.47■□□□□ 0.23
COL13A1-202ENST00000357811 ATOH7Q8N100 152 aa16.47■□□□□ 0.23
COL13A1-202ENST00000357811 A0A1W2PRE2 83 aa16.47■□□□□ 0.23
COL13A1-202ENST00000357811 M0QZK8 103 aa16.47■□□□□ 0.23
COL13A1-202ENST00000357811 BMPR1BO00238 502 aa16.47■□□□□ 0.23
COL13A1-202ENST00000357811 USF1P22415 310 aaPredicted RBP16.47■□□□□ 0.23
COL13A1-202ENST00000357811 MFAP2P55001 183 aa16.47■□□□□ 0.23
COL13A1-202ENST00000357811 GNB1LQ9BYB4 327 aa16.47■□□□□ 0.23
COL13A1-202ENST00000357811 CDC42EP3Q9UKI2 254 aa16.47■□□□□ 0.23
COL13A1-202ENST00000357811 IGKV1D-37A0A075B6S9 117 aa16.47■□□□□ 0.23
COL13A1-202ENST00000357811 FNDC10F2Z333 226 aa16.47■□□□□ 0.23
COL13A1-202ENST00000357811 LINC00614P0C842 121 aa16.47■□□□□ 0.23
COL13A1-202ENST00000357811 CD24P25063 80 aa16.47■□□□□ 0.23
COL13A1-202ENST00000357811 OSTCQ9NRP0 149 aa16.47■□□□□ 0.23
COL13A1-202ENST00000357811 LY96Q9Y6Y9 160 aa16.47■□□□□ 0.23
COL13A1-202ENST00000357811 TNXAQ16473 311 aa16.46■□□□□ 0.23
COL13A1-202ENST00000357811 TMEM177Q53S58 311 aa16.46■□□□□ 0.23
COL13A1-202ENST00000357811 GFRALQ6UXV0 394 aa16.46■□□□□ 0.23
COL13A1-202ENST00000357811 IGLV2-23P01705 113 aa16.46■□□□□ 0.23
COL13A1-202ENST00000357811 PAFAH1B2P68402 229 aa16.46■□□□□ 0.23
COL13A1-202ENST00000357811 GAGE1Q13065 139 aa16.46■□□□□ 0.23
COL13A1-202ENST00000357811 NUP37Q8NFH4 326 aa16.46■□□□□ 0.23
COL13A1-202ENST00000357811 SSUH2Q9Y2M2 353 aa16.46■□□□□ 0.23
COL13A1-202ENST00000357811 LOXP28300 417 aaPredicted RBP16.45■□□□□ 0.22
COL13A1-202ENST00000357811 BRS3P32247 399 aa16.45■□□□□ 0.22
COL13A1-202ENST00000357811 VAMP8Q9BV40 100 aa16.45■□□□□ 0.22
COL13A1-202ENST00000357811 WNT10AQ9GZT5 417 aa16.45■□□□□ 0.22
COL13A1-202ENST00000357811 WASHC3Q9Y3C0 194 aa16.45■□□□□ 0.22
COL13A1-202ENST00000357811 KIR2DL5BA0A0G2JN68 375 aa16.45■□□□□ 0.22
COL13A1-202ENST00000357811 KIR2DL5BA0A0G2JPC4 375 aa16.45■□□□□ 0.22
COL13A1-202ENST00000357811 A0A1W2PN81 502 aa16.45■□□□□ 0.22
COL13A1-202ENST00000357811 C22orf46C9J442 243 aa16.45■□□□□ 0.22
COL13A1-202ENST00000357811 KIR2DL5AQ8N109 375 aa16.45■□□□□ 0.22
COL13A1-202ENST00000357811 GPX1P07203 203 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 ZNF329Q86UD4 541 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 TMEM167AQ8TBQ9 72 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 CACNG8Q8WXS5 425 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 ASCL2Q99929 193 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 NRN1Q9NPD7 142 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 A0A1W2PS18 150 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 PEX7O00628 323 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 COX7A1P24310 79 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 MEF2CQ06413 473 aaPredicted RBP16.44■□□□□ 0.22
COL13A1-202ENST00000357811 ZNF331Q9NQX6 463 aaPredicted RBP16.44■□□□□ 0.22
COL13A1-202ENST00000357811 TNFRSF19Q9NS68 423 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms