RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 FAM166AQ6J272 317 aa12.32□□□□□ -0.44
CHD4-201ENST00000357008 FAM57AQ8TBR7 257 aa12.32□□□□□ -0.44
CHD4-201ENST00000357008 TRAV21A0A0B4J279 112 aa12.32□□□□□ -0.44
CHD4-201ENST00000357008 SAMD5Q5TGI4 173 aa12.32□□□□□ -0.44
CHD4-201ENST00000357008 SFTA2Q6UW10 78 aa12.32□□□□□ -0.44
CHD4-201ENST00000357008 SLC25A48Q6ZT89 311 aaKnown RBP12.32□□□□□ -0.44
CHD4-201ENST00000357008 SRSF4Q08170 494 aaKnown RBP12.32□□□□□ -0.44
CHD4-201ENST00000357008 PYY3Q5JQD4 70 aa12.32□□□□□ -0.44
CHD4-201ENST00000357008 NUP37Q8NFH4 326 aa12.32□□□□□ -0.44
CHD4-201ENST00000357008 AGMATQ9BSE5 352 aa12.32□□□□□ -0.44
CHD4-201ENST00000357008 CHTOPQ9Y3Y2 248 aaKnown RBP12.32□□□□□ -0.44
CHD4-201ENST00000357008 CACNA1DQ01668 2161 aa12.32□□□□□ -0.44
CHD4-201ENST00000357008 PLAURQ03405 335 aa12.31□□□□□ -0.44
CHD4-201ENST00000357008 ACTL10Q5JWF8 245 aa12.31□□□□□ -0.44
CHD4-201ENST00000357008 KIF26BQ2KJY2 2108 aa12.31□□□□□ -0.44
CHD4-201ENST00000357008 JMJD8Q96S16 334 aa12.31□□□□□ -0.44
CHD4-201ENST00000357008 YAE1D1Q9NRH1 226 aa12.31□□□□□ -0.44
CHD4-201ENST00000357008 HAX1O00165 279 aa12.31□□□□□ -0.44
CHD4-201ENST00000357008 RIPPLY3P57055 190 aa12.31□□□□□ -0.44
CHD4-201ENST00000357008 PAX2Q02962 417 aa12.31□□□□□ -0.44
CHD4-201ENST00000357008 LINC01549A6NIU2 74 aa12.31□□□□□ -0.44
CHD4-201ENST00000357008 ZNF815PA8K554 130 aa12.31□□□□□ -0.44
CHD4-201ENST00000357008 RNF182Q8N6D2 247 aa12.31□□□□□ -0.44
CHD4-201ENST00000357008 CCL19Q99731 98 aa12.31□□□□□ -0.44
CHD4-201ENST00000357008 A8MWV9 139 aa12.31□□□□□ -0.44
CHD4-201ENST00000357008 Q5PR19 223 aa12.31□□□□□ -0.44
CHD4-201ENST00000357008 CD7P09564 240 aa12.3□□□□□ -0.44
CHD4-201ENST00000357008 ANAPC13Q9BS18 74 aa12.3□□□□□ -0.44
CHD4-201ENST00000357008 COLQQ9Y215 455 aaPredicted RBP12.3□□□□□ -0.44
CHD4-201ENST00000357008 TMEM14EPQ6UXP3 125 aa12.3□□□□□ -0.44
CHD4-201ENST00000357008 GAGE13Q4V321 117 aa12.3□□□□□ -0.44
CHD4-201ENST00000357008 ITLN2Q8WWU7 325 aaPredicted RBP12.3□□□□□ -0.44
CHD4-201ENST00000357008 LY96Q9Y6Y9 160 aa12.3□□□□□ -0.44
CHD4-201ENST00000357008 PLNP26678 52 aa12.3□□□□□ -0.44
CHD4-201ENST00000357008 FGFBP3Q8TAT2 258 aa12.3□□□□□ -0.44
CHD4-201ENST00000357008 LINC01587Q99440 93 aa12.3□□□□□ -0.44
CHD4-201ENST00000357008 TRAV5A0A0B4J249 113 aa12.3□□□□□ -0.44
CHD4-201ENST00000357008 IGHV4-39P01824 125 aa12.3□□□□□ -0.44
CHD4-201ENST00000357008 PATJQ8NI35 1801 aa12.29□□□□□ -0.44
CHD4-201ENST00000357008 TFF1P04155 84 aa12.29□□□□□ -0.44
CHD4-201ENST00000357008 NABP1Q96AH0 204 aa12.29□□□□□ -0.44
CHD4-201ENST00000357008 FOXF2Q12947 444 aa12.29□□□□□ -0.44
CHD4-201ENST00000357008 DOCK4Q8N1I0 1966 aa12.29□□□□□ -0.44
CHD4-201ENST00000357008 GREB1LQ9C091 1923 aaPredicted RBP12.29□□□□□ -0.44
CHD4-201ENST00000357008 MRPL52Q86TS9 123 aaKnown RBP12.29□□□□□ -0.44
CHD4-201ENST00000357008 TMEM256Q8N2U0 113 aa12.29□□□□□ -0.44
CHD4-201ENST00000357008 GHRHP01286 108 aa12.28□□□□□ -0.44
CHD4-201ENST00000357008 IGKV1-27A0A075B6S5 117 aa12.28□□□□□ -0.44
CHD4-201ENST00000357008 MYOD1P15172 320 aa12.28□□□□□ -0.44
CHD4-201ENST00000357008 EVI2AP22794 236 aa12.28□□□□□ -0.44
CHD4-201ENST00000357008 TNFRSF14Q92956 283 aa12.28□□□□□ -0.44
CHD4-201ENST00000357008 HGFACQ04756 655 aa12.28□□□□□ -0.44
CHD4-201ENST00000357008 TRAV2A0A0B4J234 112 aa12.28□□□□□ -0.44
CHD4-201ENST00000357008 EFNA2O43921 213 aa12.28□□□□□ -0.44
CHD4-201ENST00000357008 IGKV1-5P01602 117 aa12.28□□□□□ -0.44
CHD4-201ENST00000357008 PPIFP30405 207 aaKnown RBP12.28□□□□□ -0.44
CHD4-201ENST00000357008 IGHV3-11P01762 117 aa12.28□□□□□ -0.44
CHD4-201ENST00000357008 LYL1P12980 280 aa12.28□□□□□ -0.44
CHD4-201ENST00000357008 SPATA31B1PQ5VZV4 182 aa12.28□□□□□ -0.44
CHD4-201ENST00000357008 OR10W1Q8NGF6 305 aa12.28□□□□□ -0.44
CHD4-201ENST00000357008 CRIM1Q9NZV1 1036 aa12.27□□□□□ -0.44
CHD4-201ENST00000357008 RPUSD1Q9UJJ7 312 aaKnown RBP12.27□□□□□ -0.44
CHD4-201ENST00000357008 NRXN2Q9P2S2 1712 aa12.27□□□□□ -0.45
CHD4-201ENST00000357008 MGST2Q99735 147 aa12.27□□□□□ -0.45
CHD4-201ENST00000357008 TRAV8-4A0A0B4J246 113 aa12.27□□□□□ -0.45
CHD4-201ENST00000357008 RHOGP84095 191 aa12.27□□□□□ -0.45
CHD4-201ENST00000357008 SEPSECSQ9HD40 501 aaKnown RBP12.27□□□□□ -0.45
CHD4-201ENST00000357008 TNS1Q9HBL0 1735 aaKnown RBP12.26□□□□□ -0.45
CHD4-201ENST00000357008 TAF1LQ8IZX4 1826 aa12.26□□□□□ -0.45
CHD4-201ENST00000357008 DUSP14O95147 198 aaKnown RBP12.26□□□□□ -0.45
CHD4-201ENST00000357008 CFAP161Q6P656 301 aa12.26□□□□□ -0.45
CHD4-201ENST00000357008 PF4P02776 101 aa12.26□□□□□ -0.45
CHD4-201ENST00000357008 PGPEP1Q9NXJ5 209 aa12.26□□□□□ -0.45
CHD4-201ENST00000357008 TDGF1P13385 188 aa12.26□□□□□ -0.45
CHD4-201ENST00000357008 LAGE3Q14657 143 aa12.26□□□□□ -0.45
CHD4-201ENST00000357008 GLMPQ8WWB7 406 aa12.26□□□□□ -0.45
CHD4-201ENST00000357008 SLC25A15Q9Y619 301 aa12.26□□□□□ -0.45
CHD4-201ENST00000357008 TRAV12-3A0A0B4J271 114 aa12.26□□□□□ -0.45
CHD4-201ENST00000357008 IGHV1-18A0A0C4DH31 117 aa12.26□□□□□ -0.45
CHD4-201ENST00000357008 C3orf79P0CE67 100 aa12.26□□□□□ -0.45
CHD4-201ENST00000357008 MRPL27Q9P0M9 148 aaKnown RBP12.26□□□□□ -0.45
CHD4-201ENST00000357008 NPIPB5A8MRT5 1133 aa12.26□□□□□ -0.45
CHD4-201ENST00000357008 SRRM5B3KS81 715 aa12.26□□□□□ -0.45
CHD4-201ENST00000357008 KIR3DL3Q8N743 410 aa12.26□□□□□ -0.45
CHD4-201ENST00000357008 TMEM167AQ8TBQ9 72 aa12.25□□□□□ -0.45
CHD4-201ENST00000357008 QRFPP83859 136 aa12.25□□□□□ -0.45
CHD4-201ENST00000357008 TRGV2A0A075B6R0 118 aa12.25□□□□□ -0.45
CHD4-201ENST00000357008 ERG28Q9UKR5 140 aa12.25□□□□□ -0.45
CHD4-201ENST00000357008 RALGAPA1Q6GYQ0 2036 aa12.25□□□□□ -0.45
CHD4-201ENST00000357008 RFNGQ9Y644 331 aa12.25□□□□□ -0.45
CHD4-201ENST00000357008 SDK2Q58EX2 2172 aa12.25□□□□□ -0.45
CHD4-201ENST00000357008 DOCK3Q8IZD9 2030 aa12.25□□□□□ -0.45
CHD4-201ENST00000357008 OVOL1O14753 267 aa12.25□□□□□ -0.45
CHD4-201ENST00000357008 PEMTQ9UBM1 199 aa12.25□□□□□ -0.45
CHD4-201ENST00000357008 CHD5Q8TDI0 1954 aa12.24□□□□□ -0.45
CHD4-201ENST00000357008 TRBV6-6A0A0A6YYG2 114 aa12.24□□□□□ -0.45
CHD4-201ENST00000357008 D6R8Y8 96 aa12.24□□□□□ -0.45
CHD4-201ENST00000357008 NDUFS8O00217 210 aa12.24□□□□□ -0.45
CHD4-201ENST00000357008 CD300EQ496F6 205 aaPredicted RBP12.24□□□□□ -0.45
CHD4-201ENST00000357008 BCL6BQ8N143 479 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms