RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 CYB5R2Q6BCY4 276 aa11.19□□□□□ -0.62
SMC6-201ENST00000351948 MSMBP08118 114 aa11.19□□□□□ -0.62
SMC6-201ENST00000351948 CNTFRP26992 372 aa11.19□□□□□ -0.62
SMC6-201ENST00000351948 CKS2P33552 79 aa11.19□□□□□ -0.62
SMC6-201ENST00000351948 BEX4Q9NWD9 120 aaPredicted RBP11.19□□□□□ -0.62
SMC6-201ENST00000351948 LRTM2Q8N967 370 aa11.19□□□□□ -0.62
SMC6-201ENST00000351948 RNF138Q8WVD3 245 aa11.19□□□□□ -0.62
SMC6-201ENST00000351948 Q9H3A6 140 aa11.19□□□□□ -0.62
SMC6-201ENST00000351948 TUBA4BQ9H853 241 aa11.19□□□□□ -0.62
SMC6-201ENST00000351948 GRIFINA4D1Z8 144 aa11.18□□□□□ -0.62
SMC6-201ENST00000351948 RPL15P61313 204 aaKnown RBP11.18□□□□□ -0.62
SMC6-201ENST00000351948 CCL20P78556 96 aa11.18□□□□□ -0.62
SMC6-201ENST00000351948 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.18□□□□□ -0.62
SMC6-201ENST00000351948 M0R1W7 72 aa11.18□□□□□ -0.62
SMC6-201ENST00000351948 PRTN3P24158 256 aa11.18□□□□□ -0.62
SMC6-201ENST00000351948 TMEM155Q4W5P6 130 aa11.18□□□□□ -0.62
SMC6-201ENST00000351948 TREML4Q6UXN2 200 aa11.18□□□□□ -0.62
SMC6-201ENST00000351948 TRBV6-6A0A0A6YYG2 114 aa11.18□□□□□ -0.62
SMC6-201ENST00000351948 M0R381 172 aa11.18□□□□□ -0.62
SMC6-201ENST00000351948 GPX4P36969 197 aaPredicted RBP11.18□□□□□ -0.62
SMC6-201ENST00000351948 ZNF585BQ52M93 769 aa11.18□□□□□ -0.62
SMC6-201ENST00000351948 C8orf46Q8TAG6 207 aa11.18□□□□□ -0.62
SMC6-201ENST00000351948 YTHDF2Q9Y5A9 579 aaKnown RBP11.18□□□□□ -0.62
SMC6-201ENST00000351948 IGLV3-9A0A075B6K5 115 aa11.18□□□□□ -0.62
SMC6-201ENST00000351948 PGPEP1LA6NFU8 196 aa11.18□□□□□ -0.62
SMC6-201ENST00000351948 PEX7O00628 323 aa11.18□□□□□ -0.62
SMC6-201ENST00000351948 LOXP28300 417 aaPredicted RBP11.18□□□□□ -0.62
SMC6-201ENST00000351948 FAM159AQ6UWV7 190 aa11.18□□□□□ -0.62
SMC6-201ENST00000351948 IL17RELQ6ZVW7 336 aa11.18□□□□□ -0.62
SMC6-201ENST00000351948 LINC01356Q8N9X3 169 aa11.18□□□□□ -0.62
SMC6-201ENST00000351948 BTF3P20290 206 aaKnown RBP11.17□□□□□ -0.62
SMC6-201ENST00000351948 SRSF3P84103 164 aaKnown RBP11.17□□□□□ -0.62
SMC6-201ENST00000351948 SMUG1Q53HV7 270 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 SEM1Q6ZVN7 128 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 ELOVL1Q9BW60 279 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 LIME1Q9H400 295 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 SIGLEC9Q9Y336 463 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 RELBQ01201 579 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 SPATA31B1PQ5VZV4 182 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 SFRP2Q96HF1 295 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 KLK15Q9H2R5 256 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 MBNL3Q9NUK0 354 aaKnown RBP11.17□□□□□ -0.62
SMC6-201ENST00000351948 SHISA9B4DS77 424 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 NDPQ00604 133 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 C2orf83Q53S99 150 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 ZNF506Q5JVG8 444 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 MINOS1Q5TGZ0 78 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 CYYR1Q96J86 154 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 MINOS1-NBL1R4GNA1 71 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 DENND4AQ7Z401 1863 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 SLC25A16P16260 332 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 GATA4P43694 442 aa11.17□□□□□ -0.62
SMC6-201ENST00000351948 CD99P14209 185 aa11.16□□□□□ -0.62
SMC6-201ENST00000351948 EFNB3Q15768 340 aa11.16□□□□□ -0.62
SMC6-201ENST00000351948 PACRGQ96M98 296 aaPredicted RBP11.16□□□□□ -0.62
SMC6-201ENST00000351948 HIVEP2P31629 2446 aa11.16□□□□□ -0.62
SMC6-201ENST00000351948 PSMB11A5LHX3 300 aa11.16□□□□□ -0.62
SMC6-201ENST00000351948 DIAPH2-AS1Q14236 149 aa11.16□□□□□ -0.62
SMC6-201ENST00000351948 IQCJQ1A5X6 159 aa11.16□□□□□ -0.62
SMC6-201ENST00000351948 Q6ZN92 141 aa11.16□□□□□ -0.62
SMC6-201ENST00000351948 WDR83OSQ9Y284 106 aa11.16□□□□□ -0.62
SMC6-201ENST00000351948 FOXA3P55318 350 aaPredicted RBP11.16□□□□□ -0.62
SMC6-201ENST00000351948 PAX8Q06710 450 aa11.16□□□□□ -0.62
SMC6-201ENST00000351948 PSG1P11464 419 aa11.16□□□□□ -0.62
SMC6-201ENST00000351948 G0S2P27469 103 aa11.16□□□□□ -0.62
SMC6-201ENST00000351948 ERVK11-1P61568 191 aa11.16□□□□□ -0.62
SMC6-201ENST00000351948 ZNF600Q6ZNG1 722 aa11.16□□□□□ -0.62
SMC6-201ENST00000351948 COX19Q49B96 90 aa11.15□□□□□ -0.62
SMC6-201ENST00000351948 OR1P1Q8NH06 330 aa11.15□□□□□ -0.62
SMC6-201ENST00000351948 TMEM167AQ8TBQ9 72 aa11.15□□□□□ -0.62
SMC6-201ENST00000351948 FAM181BA6NEQ2 426 aa11.15□□□□□ -0.62
SMC6-201ENST00000351948 GCGP01275 180 aa11.15□□□□□ -0.62
SMC6-201ENST00000351948 TSPOP30536 169 aa11.15□□□□□ -0.62
SMC6-201ENST00000351948 TMEM250H0YL14 139 aa11.15□□□□□ -0.63
SMC6-201ENST00000351948 SRP19P09132 144 aaKnown RBP11.15□□□□□ -0.63
SMC6-201ENST00000351948 CBLN1P23435 193 aa11.15□□□□□ -0.63
SMC6-201ENST00000351948 ADORA2A-AS1P86434 159 aa11.15□□□□□ -0.63
SMC6-201ENST00000351948 ELOBQ15370 118 aa11.15□□□□□ -0.63
SMC6-201ENST00000351948 Q8NA96 180 aa11.15□□□□□ -0.63
SMC6-201ENST00000351948 HIST1H2BAQ96A08 127 aa11.15□□□□□ -0.63
SMC6-201ENST00000351948 MRPL18Q9H0U6 180 aaKnown RBP11.15□□□□□ -0.63
SMC6-201ENST00000351948 LMO1P25800 156 aa11.14□□□□□ -0.63
SMC6-201ENST00000351948 RNASE4P34096 147 aaKnown RBP11.14□□□□□ -0.63
SMC6-201ENST00000351948 ZNF56Q15929 161 aa11.14□□□□□ -0.63
SMC6-201ENST00000351948 KLHDC1Q8N7A1 406 aa11.14□□□□□ -0.63
SMC6-201ENST00000351948 NCOA6Q14686 2063 aaPredicted RBP11.14□□□□□ -0.63
SMC6-201ENST00000351948 Q8TCH9 128 aa11.14□□□□□ -0.63
SMC6-201ENST00000351948 GGTLC1Q9BX51 225 aa11.14□□□□□ -0.63
SMC6-201ENST00000351948 WNK1Q9H4A3 2382 aa11.14□□□□□ -0.63
SMC6-201ENST00000351948 HNRNPA3P51991 378 aaKnown RBP11.14□□□□□ -0.63
SMC6-201ENST00000351948 C17orf58Q2M2W7 97 aa11.14□□□□□ -0.63
SMC6-201ENST00000351948 LDLRAD2Q5SZI1 272 aa11.14□□□□□ -0.63
SMC6-201ENST00000351948 SCRT1Q9BWW7 348 aa11.14□□□□□ -0.63
SMC6-201ENST00000351948 PCNX3Q9H6A9 2034 aa11.14□□□□□ -0.63
SMC6-201ENST00000351948 Q1RN00 199 aa11.14□□□□□ -0.63
SMC6-201ENST00000351948 SYT8Q8NBV8 401 aa11.14□□□□□ -0.63
SMC6-201ENST00000351948 JMJD8Q96S16 334 aa11.14□□□□□ -0.63
SMC6-201ENST00000351948 ZNF257Q9Y2Q1 563 aa11.14□□□□□ -0.63
SMC6-201ENST00000351948 TRAV20A0A0B4J274 112 aa11.13□□□□□ -0.63
SMC6-201ENST00000351948 IGKV3OR2-268A0A0C4DH90 116 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms