RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 SRSF12Q8WXF0 261 aaKnown RBP14.85□□□□□ -0.03
HOXA9-201ENST00000343483 NAV3Q8IVL0 2385 aa14.84□□□□□ -0.03
HOXA9-201ENST00000343483 PGPEP1LA6NFU8 196 aa14.84□□□□□ -0.03
HOXA9-201ENST00000343483 TEX22C9J3V5 150 aa14.84□□□□□ -0.03
HOXA9-201ENST00000343483 PPP5D1E7EU14 171 aa14.84□□□□□ -0.03
HOXA9-201ENST00000343483 NBR2O15453 112 aa14.84□□□□□ -0.03
HOXA9-201ENST00000343483 CNIH1O95406 144 aa14.84□□□□□ -0.03
HOXA9-201ENST00000343483 PDLIM4P50479 330 aa14.84□□□□□ -0.03
HOXA9-201ENST00000343483 ZNF114Q8NC26 417 aa14.84□□□□□ -0.03
HOXA9-201ENST00000343483 PPP1R2P9O14990 202 aa14.83□□□□□ -0.03
HOXA9-201ENST00000343483 GOSR1O95249 250 aa14.83□□□□□ -0.03
HOXA9-201ENST00000343483 CD99P14209 185 aa14.83□□□□□ -0.03
HOXA9-201ENST00000343483 FBN2P35556 2912 aa14.83□□□□□ -0.03
HOXA9-201ENST00000343483 MFAP2P55001 183 aa14.83□□□□□ -0.03
HOXA9-201ENST00000343483 CCDC144NLQ6NUI1 221 aa14.83□□□□□ -0.03
HOXA9-201ENST00000343483 DYNAPQ8N1N2 210 aa14.83□□□□□ -0.03
HOXA9-201ENST00000343483 OR2T10Q8NGZ9 312 aa14.83□□□□□ -0.03
HOXA9-201ENST00000343483 LPAR2Q9HBW0 351 aa14.83□□□□□ -0.03
HOXA9-201ENST00000343483 PLXNB1O43157 2135 aa14.83□□□□□ -0.04
HOXA9-201ENST00000343483 S100A2P29034 98 aa14.83□□□□□ -0.04
HOXA9-201ENST00000343483 S100A12P80511 92 aa14.83□□□□□ -0.04
HOXA9-201ENST00000343483 FBLN7Q53RD9 439 aa14.83□□□□□ -0.04
HOXA9-201ENST00000343483 KCNIP4Q6PIL6 250 aa14.83□□□□□ -0.04
HOXA9-201ENST00000343483 OR4X1Q8NH49 305 aa14.83□□□□□ -0.04
HOXA9-201ENST00000343483 EAF1Q96JC9 268 aaPredicted RBP14.83□□□□□ -0.04
HOXA9-201ENST00000343483 NIT2Q9NQR4 276 aa14.83□□□□□ -0.04
HOXA9-201ENST00000343483 TECRQ9NZ01 308 aaKnown RBP14.83□□□□□ -0.04
HOXA9-201ENST00000343483 MRPL36Q9P0J6 103 aaKnown RBP14.83□□□□□ -0.04
HOXA9-201ENST00000343483 TRBV20OR9-2A0A075B6H5 130 aa14.82□□□□□ -0.04
HOXA9-201ENST00000343483 ELOA3CA0A087WX78 387 aaPredicted RBP14.82□□□□□ -0.04
HOXA9-201ENST00000343483 GGCTO75223 188 aaKnown RBP14.82□□□□□ -0.04
HOXA9-201ENST00000343483 GFI1BQ5VTD9 330 aa14.82□□□□□ -0.04
HOXA9-201ENST00000343483 OR1P1Q8NH06 330 aa14.82□□□□□ -0.04
HOXA9-201ENST00000343483 UHRF2Q96PU4 802 aa14.82□□□□□ -0.04
HOXA9-201ENST00000343483 GAR1Q9NY12 217 aaKnown RBP14.82□□□□□ -0.04
HOXA9-201ENST00000343483 MINOS1Q5TGZ0 78 aa14.81□□□□□ -0.04
HOXA9-201ENST00000343483 ETFRF1Q6IPR1 90 aa14.81□□□□□ -0.04
HOXA9-201ENST00000343483 SLC25A33Q9BSK2 321 aa14.81□□□□□ -0.04
HOXA9-201ENST00000343483 C19orf24Q9BVV8 132 aa14.81□□□□□ -0.04
HOXA9-201ENST00000343483 TMEM167BQ9NRX6 74 aa14.81□□□□□ -0.04
HOXA9-201ENST00000343483 MINOS1-NBL1R4GNA1 71 aa14.81□□□□□ -0.04
HOXA9-201ENST00000343483 CSMD1Q96PZ7 3565 aa14.81□□□□□ -0.04
HOXA9-201ENST00000343483 IGHV3-21A0A0B4J1V1 117 aa14.81□□□□□ -0.04
HOXA9-201ENST00000343483 MDFIC2A0A1B0GVS7 189 aa14.81□□□□□ -0.04
HOXA9-201ENST00000343483 OR5G3P0C626 314 aa14.81□□□□□ -0.04
HOXA9-201ENST00000343483 ZNF90Q03938 601 aa14.81□□□□□ -0.04
HOXA9-201ENST00000343483 HIST3H2BBQ8N257 126 aa14.81□□□□□ -0.04
HOXA9-201ENST00000343483 SFRP2Q96HF1 295 aa14.81□□□□□ -0.04
HOXA9-201ENST00000343483 TBX15Q96SF7 602 aa14.81□□□□□ -0.04
HOXA9-201ENST00000343483 F11RQ9Y624 299 aaKnown RBP14.81□□□□□ -0.04
HOXA9-201ENST00000343483 HNF1AP20823 631 aa14.8□□□□□ -0.04
HOXA9-201ENST00000343483 FAM3BP58499 235 aaPredicted RBP14.8□□□□□ -0.04
HOXA9-201ENST00000343483 PDZD11Q5EBL8 140 aa14.8□□□□□ -0.04
HOXA9-201ENST00000343483 NPBQ8NG41 125 aa14.8□□□□□ -0.04
HOXA9-201ENST00000343483 FAM168AQ92567 244 aa14.8□□□□□ -0.04
HOXA9-201ENST00000343483 IGKV1D-37A0A075B6S9 117 aa14.8□□□□□ -0.04
HOXA9-201ENST00000343483 TCRBV4S1A1TA0A5B7 111 aa14.8□□□□□ -0.04
HOXA9-201ENST00000343483 OOSP1A8MZH6 123 aa14.8□□□□□ -0.04
HOXA9-201ENST00000343483 OR7C2O60412 319 aa14.8□□□□□ -0.04
HOXA9-201ENST00000343483 TAS2R45P59539 299 aa14.8□□□□□ -0.04
HOXA9-201ENST00000343483 RUSC1-AS1Q66K80 236 aa14.8□□□□□ -0.04
HOXA9-201ENST00000343483 PVRIGQ6DKI7 326 aa14.8□□□□□ -0.04
HOXA9-201ENST00000343483 PQLC2Q6ZP29 291 aa14.8□□□□□ -0.04
HOXA9-201ENST00000343483 TMEM37Q8WXS4 190 aa14.8□□□□□ -0.04
HOXA9-201ENST00000343483 C11orf52Q96A22 123 aa14.8□□□□□ -0.04
HOXA9-201ENST00000343483 PIMREGQ9BSJ6 248 aa14.8□□□□□ -0.04
HOXA9-201ENST00000343483 GPR61Q9BZJ8 451 aa14.8□□□□□ -0.04
HOXA9-201ENST00000343483 ARL2-SNX15V9GYD0 113 aa14.8□□□□□ -0.04
HOXA9-201ENST00000343483 CORTO00230 105 aa14.79□□□□□ -0.04
HOXA9-201ENST00000343483 NDUFA3O95167 84 aa14.79□□□□□ -0.04
HOXA9-201ENST00000343483 THAP8Q8NA92 274 aa14.79□□□□□ -0.04
HOXA9-201ENST00000343483 OCC1Q8TAD7 63 aa14.79□□□□□ -0.04
HOXA9-201ENST00000343483 C22orf15Q8WYQ4 148 aa14.79□□□□□ -0.04
HOXA9-201ENST00000343483 ZNF503Q96F45 646 aa14.79□□□□□ -0.04
HOXA9-201ENST00000343483 SPOCK3Q9BQ16 436 aa14.79□□□□□ -0.04
HOXA9-201ENST00000343483 NCBP2LA6PVI3 153 aaKnown RBP14.78□□□□□ -0.04
HOXA9-201ENST00000343483 CYSRT1A8MQ03 144 aa14.78□□□□□ -0.04
HOXA9-201ENST00000343483 UBE2E1P51965 193 aa14.78□□□□□ -0.04
HOXA9-201ENST00000343483 FXYD3Q14802 87 aa14.78□□□□□ -0.04
HOXA9-201ENST00000343483 DMRT1Q9Y5R6 373 aa14.78□□□□□ -0.04
HOXA9-201ENST00000343483 MED13LQ71F56 2210 aa14.78□□□□□ -0.04
HOXA9-201ENST00000343483 ITPR2Q14571 2701 aa14.78□□□□□ -0.04
HOXA9-201ENST00000343483 TYMSP04818 313 aa14.78□□□□□ -0.04
HOXA9-201ENST00000343483 CRYGCP07315 174 aa14.78□□□□□ -0.04
HOXA9-201ENST00000343483 ATP5J2P56134 94 aa14.78□□□□□ -0.04
HOXA9-201ENST00000343483 C5orf64Q2M2E5 130 aa14.78□□□□□ -0.04
HOXA9-201ENST00000343483 IMMP2LQ96T52 175 aa14.78□□□□□ -0.04
HOXA9-201ENST00000343483 FAM103A1Q9BTL3 118 aaKnown RBP14.78□□□□□ -0.04
HOXA9-201ENST00000343483 PITPNC1Q9UKF7 332 aa14.78□□□□□ -0.04
HOXA9-201ENST00000343483 UNC79Q9P2D8 2635 aa14.77□□□□□ -0.04
HOXA9-201ENST00000343483 COX7A2P2O60397 106 aa14.77□□□□□ -0.04
HOXA9-201ENST00000343483 C8orf88P0DMB2 117 aa14.77□□□□□ -0.04
HOXA9-201ENST00000343483 OR10D4PQ8NGN7 298 aa14.77□□□□□ -0.04
HOXA9-201ENST00000343483 MRPL32Q9BYC8 188 aaKnown RBP14.77□□□□□ -0.04
HOXA9-201ENST00000343483 DNAJC4Q9NNZ3 241 aa14.77□□□□□ -0.04
HOXA9-201ENST00000343483 TNFRSF19Q9NS68 423 aa14.77□□□□□ -0.04
HOXA9-201ENST00000343483 TBL2Q9Y4P3 447 aaKnown RBP14.77□□□□□ -0.04
HOXA9-201ENST00000343483 SVEP1Q4LDE5 3571 aa14.77□□□□□ -0.04
HOXA9-201ENST00000343483 OR10J4P0C629 311 aa14.77□□□□□ -0.05
HOXA9-201ENST00000343483 SELENOTP62341 195 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms