RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 AKR1C1Q04828 323 aa13.8□□□□□ -0.2
SDCBP2-201ENST00000339987 CLINT1Q14677 625 aa13.8□□□□□ -0.2
SDCBP2-201ENST00000339987 HIST2H2BDQ6DRA6 164 aa13.8□□□□□ -0.2
SDCBP2-201ENST00000339987 C3orf56Q8N813 242 aa13.8□□□□□ -0.2
SDCBP2-201ENST00000339987 UBAC2Q8NBM4 344 aa13.8□□□□□ -0.2
SDCBP2-201ENST00000339987 ANKRD34BA5PLL1 514 aa13.79□□□□□ -0.2
SDCBP2-201ENST00000339987 OR2T8A6NH00 312 aa13.79□□□□□ -0.2
SDCBP2-201ENST00000339987 TGOLN2O43493 480 aa13.79□□□□□ -0.2
SDCBP2-201ENST00000339987 TRBV12-3P01733 135 aa13.79□□□□□ -0.2
SDCBP2-201ENST00000339987 HSPB1P04792 205 aaKnown RBP13.79□□□□□ -0.2
SDCBP2-201ENST00000339987 IGLC1P0CG04 106 aa13.79□□□□□ -0.2
SDCBP2-201ENST00000339987 CXCL2P19875 107 aa13.79□□□□□ -0.2
SDCBP2-201ENST00000339987 AP2S1P53680 142 aaPredicted RBP13.79□□□□□ -0.2
SDCBP2-201ENST00000339987 TREML4Q6UXN2 200 aa13.79□□□□□ -0.2
SDCBP2-201ENST00000339987 SMIM3Q9BZL3 60 aa13.79□□□□□ -0.2
SDCBP2-201ENST00000339987 WDR83OSQ9Y284 106 aa13.79□□□□□ -0.2
SDCBP2-201ENST00000339987 LSM4Q9Y4Z0 139 aaKnown RBP13.79□□□□□ -0.2
SDCBP2-201ENST00000339987 A0A1W2PRX2 142 aa13.78□□□□□ -0.2
SDCBP2-201ENST00000339987 CTSGP08311 255 aa13.78□□□□□ -0.2
SDCBP2-201ENST00000339987 OR10J1P30954 320 aa13.78□□□□□ -0.2
SDCBP2-201ENST00000339987 ARL3P36405 182 aa13.78□□□□□ -0.2
SDCBP2-201ENST00000339987 SHISA2Q6UWI4 295 aa13.78□□□□□ -0.2
SDCBP2-201ENST00000339987 TRGV9Q99603 122 aa13.78□□□□□ -0.2
SDCBP2-201ENST00000339987 WFDC1Q9HC57 220 aa13.78□□□□□ -0.2
SDCBP2-201ENST00000339987 IGKV1D-37A0A075B6S9 117 aa13.77□□□□□ -0.21
SDCBP2-201ENST00000339987 IGKV1OR2-108A0A075B7D4 117 aa13.77□□□□□ -0.21
SDCBP2-201ENST00000339987 UBE2L5PA0A1B0GUS4 154 aa13.77□□□□□ -0.21
SDCBP2-201ENST00000339987 BMPR1BO00238 502 aa13.77□□□□□ -0.21
SDCBP2-201ENST00000339987 TAAR5O14804 337 aa13.77□□□□□ -0.21
SDCBP2-201ENST00000339987 NUPL2O15504 423 aaKnown RBP13.77□□□□□ -0.21
SDCBP2-201ENST00000339987 IGKV1-17P01599 117 aa13.77□□□□□ -0.21
SDCBP2-201ENST00000339987 ADMP35318 185 aa13.77□□□□□ -0.21
SDCBP2-201ENST00000339987 NSUN5P1Q3KNT7 163 aa13.77□□□□□ -0.21
SDCBP2-201ENST00000339987 TEPPQ6URK8 271 aa13.77□□□□□ -0.21
SDCBP2-201ENST00000339987 C8orf86Q6ZUL3 223 aa13.77□□□□□ -0.21
SDCBP2-201ENST00000339987 MDFIQ99750 246 aa13.77□□□□□ -0.21
SDCBP2-201ENST00000339987 CHRDL1Q9BU40 450 aa13.77□□□□□ -0.21
SDCBP2-201ENST00000339987 PARD6GQ9BYG4 376 aaPredicted RBP13.77□□□□□ -0.21
SDCBP2-201ENST00000339987 ZFP92A6NM28 416 aa13.76□□□□□ -0.21
SDCBP2-201ENST00000339987 PPP5D1E7EU14 171 aa13.76□□□□□ -0.21
SDCBP2-201ENST00000339987 GGCTO75223 188 aaKnown RBP13.76□□□□□ -0.21
SDCBP2-201ENST00000339987 MPDU1O75352 247 aa13.76□□□□□ -0.21
SDCBP2-201ENST00000339987 ZNF266Q14584 549 aa13.76□□□□□ -0.21
SDCBP2-201ENST00000339987 LGALSLQ3ZCW2 172 aaPredicted RBP13.76□□□□□ -0.21
SDCBP2-201ENST00000339987 LAMTOR1Q6IAA8 161 aa13.76□□□□□ -0.21
SDCBP2-201ENST00000339987 IGHV4OR15-8A0A075B7B6 117 aa13.75□□□□□ -0.21
SDCBP2-201ENST00000339987 A0A087WW49 117 aa13.75□□□□□ -0.21
SDCBP2-201ENST00000339987 LINC01619G3V211 115 aa13.75□□□□□ -0.21
SDCBP2-201ENST00000339987 IFNA5P01569 189 aa13.75□□□□□ -0.21
SDCBP2-201ENST00000339987 YPEL3P61236 119 aaPredicted RBP13.75□□□□□ -0.21
SDCBP2-201ENST00000339987 ZNF616Q08AN1 781 aa13.75□□□□□ -0.21
SDCBP2-201ENST00000339987 FHL3Q13643 280 aa13.75□□□□□ -0.21
SDCBP2-201ENST00000339987 DEFB136Q30KP8 78 aa13.75□□□□□ -0.21
SDCBP2-201ENST00000339987 TIGITQ495A1 244 aa13.75□□□□□ -0.21
SDCBP2-201ENST00000339987 TMUB2Q71RG4 321 aa13.75□□□□□ -0.21
SDCBP2-201ENST00000339987 OR1N2Q8NGR9 330 aa13.75□□□□□ -0.21
SDCBP2-201ENST00000339987 RAX2Q96IS3 184 aa13.75□□□□□ -0.21
SDCBP2-201ENST00000339987 ARPC5LQ9BPX5 153 aa13.75□□□□□ -0.21
SDCBP2-201ENST00000339987 ARL6Q9H0F7 186 aa13.75□□□□□ -0.21
SDCBP2-201ENST00000339987 BOLA1Q9Y3E2 137 aa13.75□□□□□ -0.21
SDCBP2-201ENST00000339987 KANTRA0A1W2PQU2 76 aa13.74□□□□□ -0.21
SDCBP2-201ENST00000339987 FABP1P07148 127 aa13.74□□□□□ -0.21
SDCBP2-201ENST00000339987 ZP3P21754 424 aa13.74□□□□□ -0.21
SDCBP2-201ENST00000339987 RELQ04864 619 aaPredicted RBP13.74□□□□□ -0.21
SDCBP2-201ENST00000339987 RAB31Q13636 194 aa13.74□□□□□ -0.21
SDCBP2-201ENST00000339987 BTNL8Q6UX41 500 aa13.74□□□□□ -0.21
SDCBP2-201ENST00000339987 ZNF600Q6ZNG1 722 aa13.74□□□□□ -0.21
SDCBP2-201ENST00000339987 OR11H1Q8NG94 326 aa13.74□□□□□ -0.21
SDCBP2-201ENST00000339987 DPF1Q92782 380 aa13.74□□□□□ -0.21
SDCBP2-201ENST00000339987 WDR61Q9GZS3 305 aaKnown RBP13.74□□□□□ -0.21
SDCBP2-201ENST00000339987 BORCS7-ASMTA0A0B4J1R7 106 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 CCL24O00175 119 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 BCL2L11O43521 198 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 TOMM40O96008 361 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 FGF7P21781 194 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 MYCNOSP40205 109 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 SELENOTP62341 195 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 GPHB5Q86YW7 130 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 ZNF414Q96IQ9 312 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 MGST2Q99735 147 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 AGPAT2O15120 278 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 JTBO76095 146 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 OR2C1O95371 312 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 HOXD3P31249 432 aaPredicted RBP13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 OPCMLQ14982 345 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 RPEL1Q2QD12 228 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 RPL7L1Q6DKI1 246 aaKnown RBP13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 CYP2G1PQ6ZSU1 146 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 OR4F17Q8NGA8 305 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 SCGB1C1Q8TD33 95 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 OR4F4Q96R69 305 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 CYTL1Q9NRR1 136 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 SLC45A2Q9UMX9 530 aa13.73□□□□□ -0.21
SDCBP2-201ENST00000339987 COL6A5A8TX70 2615 aa13.72□□□□□ -0.21
SDCBP2-201ENST00000339987 NDUFA4O00483 81 aa13.72□□□□□ -0.21
SDCBP2-201ENST00000339987 CAMLGP49069 296 aa13.72□□□□□ -0.21
SDCBP2-201ENST00000339987 ZNF90Q03938 601 aa13.72□□□□□ -0.21
SDCBP2-201ENST00000339987 Q8WTZ3 238 aa13.72□□□□□ -0.21
SDCBP2-201ENST00000339987 DUX3Q96PT4 197 aa13.72□□□□□ -0.21
SDCBP2-201ENST00000339987 GGTLC1Q9BX51 225 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms