RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 TCTAP57738 103 aa13.49□□□□□ -0.25
CDC42EP4-201ENST00000335793 FER1L6-AS1Q8NA97 138 aa13.49□□□□□ -0.25
CDC42EP4-201ENST00000335793 MCRIP2Q9BUT9 160 aaKnown RBP13.49□□□□□ -0.25
CDC42EP4-201ENST00000335793 SSBP3Q9BWW4 388 aaPredicted RBP13.49□□□□□ -0.25
CDC42EP4-201ENST00000335793 THYN1Q9P016 225 aa13.49□□□□□ -0.25
CDC42EP4-201ENST00000335793 PLAUP00749 431 aa13.49□□□□□ -0.25
CDC42EP4-201ENST00000335793 UBE2L3P68036 154 aaKnown RBP13.49□□□□□ -0.25
CDC42EP4-201ENST00000335793 CLEC7AQ9BXN2 247 aa13.49□□□□□ -0.25
CDC42EP4-201ENST00000335793 DKK4Q9UBT3 224 aa13.49□□□□□ -0.25
CDC42EP4-201ENST00000335793 DSCAMO60469 2012 aa13.48□□□□□ -0.25
CDC42EP4-201ENST00000335793 TRAV26-1A0A087WT03 109 aa13.48□□□□□ -0.25
CDC42EP4-201ENST00000335793 ERHP84090 104 aaKnown RBP13.48□□□□□ -0.25
CDC42EP4-201ENST00000335793 SGK494Q96LW2 274 aa13.48□□□□□ -0.25
CDC42EP4-201ENST00000335793 IGHV2-26A0A0B4J1V2 119 aa13.48□□□□□ -0.25
CDC42EP4-201ENST00000335793 TRAV5A0A0B4J249 113 aa13.48□□□□□ -0.25
CDC42EP4-201ENST00000335793 TRGV8A0A0C4DH27 118 aa13.48□□□□□ -0.25
CDC42EP4-201ENST00000335793 APOA2P02652 100 aa13.48□□□□□ -0.25
CDC42EP4-201ENST00000335793 APELAP0DMC3 54 aa13.48□□□□□ -0.25
CDC42EP4-201ENST00000335793 ZNF474Q6S9Z5 364 aaPredicted RBP13.48□□□□□ -0.25
CDC42EP4-201ENST00000335793 OR2T6Q8NHC8 308 aa13.48□□□□□ -0.25
CDC42EP4-201ENST00000335793 TMEM14BQ9NUH8 114 aa13.48□□□□□ -0.25
CDC42EP4-201ENST00000335793 FOXA2Q9Y261 457 aaPredicted RBP13.48□□□□□ -0.25
CDC42EP4-201ENST00000335793 ZGRF1Q86YA3 2104 aa13.48□□□□□ -0.25
CDC42EP4-201ENST00000335793 SRRM4A7MD48 611 aaKnown RBP13.47□□□□□ -0.25
CDC42EP4-201ENST00000335793 PRSS46E5RG02 174 aa13.47□□□□□ -0.25
CDC42EP4-201ENST00000335793 FTH1P19P0C7X4 201 aa13.47□□□□□ -0.25
CDC42EP4-201ENST00000335793 AZU1P20160 251 aa13.47□□□□□ -0.25
CDC42EP4-201ENST00000335793 CA7P43166 264 aa13.47□□□□□ -0.25
CDC42EP4-201ENST00000335793 TMPRSS3P57727 454 aa13.47□□□□□ -0.25
CDC42EP4-201ENST00000335793 PAX2Q02962 417 aa13.47□□□□□ -0.25
CDC42EP4-201ENST00000335793 C1orf159Q96HA4 380 aa13.47□□□□□ -0.25
CDC42EP4-201ENST00000335793 ENSAO43768 121 aaKnown RBP13.47□□□□□ -0.25
CDC42EP4-201ENST00000335793 IBA57Q5T440 356 aaKnown RBP13.47□□□□□ -0.25
CDC42EP4-201ENST00000335793 LINC00479Q96M42 142 aa13.47□□□□□ -0.25
CDC42EP4-201ENST00000335793 A0A1W2PS18 150 aa13.47□□□□□ -0.25
CDC42EP4-201ENST00000335793 DLL1O00548 723 aa13.47□□□□□ -0.25
CDC42EP4-201ENST00000335793 YPEL3P61236 119 aaPredicted RBP13.47□□□□□ -0.25
CDC42EP4-201ENST00000335793 TMEM249Q2WGJ8 235 aa13.47□□□□□ -0.25
CDC42EP4-201ENST00000335793 OR10X1Q8NGY0 326 aa13.47□□□□□ -0.25
CDC42EP4-201ENST00000335793 ZNF331Q9NQX6 463 aaPredicted RBP13.47□□□□□ -0.25
CDC42EP4-201ENST00000335793 MRPS16Q9Y3D3 137 aaKnown RBP13.47□□□□□ -0.25
CDC42EP4-201ENST00000335793 SAA1P0DJI8 122 aaPredicted RBP13.46□□□□□ -0.25
CDC42EP4-201ENST00000335793 CCL3L1P16619 93 aa13.46□□□□□ -0.25
CDC42EP4-201ENST00000335793 GUSBP1Q15486 140 aa13.46□□□□□ -0.25
CDC42EP4-201ENST00000335793 TIMM23BQ5SRD1 257 aa13.46□□□□□ -0.25
CDC42EP4-201ENST00000335793 RBMXL3Q8N7X1 1067 aaKnown RBP13.46□□□□□ -0.25
CDC42EP4-201ENST00000335793 DDB2Q92466 427 aa13.46□□□□□ -0.25
CDC42EP4-201ENST00000335793 NAV3Q8IVL0 2385 aa13.46□□□□□ -0.25
CDC42EP4-201ENST00000335793 TEX50A0A1B0GTY4 177 aa13.46□□□□□ -0.25
CDC42EP4-201ENST00000335793 hADV38S2A0JD32 116 aa13.46□□□□□ -0.25
CDC42EP4-201ENST00000335793 PPIAL4DF5H284 164 aa13.46□□□□□ -0.25
CDC42EP4-201ENST00000335793 COX7A2P2O60397 106 aa13.46□□□□□ -0.25
CDC42EP4-201ENST00000335793 C5orf17Q8NAS9 161 aa13.46□□□□□ -0.25
CDC42EP4-201ENST00000335793 OR4F17Q8NGA8 305 aa13.46□□□□□ -0.25
CDC42EP4-201ENST00000335793 CCL17Q92583 94 aa13.46□□□□□ -0.25
CDC42EP4-201ENST00000335793 A0A087X0K7 114 aa13.45□□□□□ -0.26
CDC42EP4-201ENST00000335793 UPK2O00526 184 aa13.45□□□□□ -0.26
CDC42EP4-201ENST00000335793 SRIP30626 198 aa13.45□□□□□ -0.26
CDC42EP4-201ENST00000335793 RAB9AP51151 201 aa13.45□□□□□ -0.26
CDC42EP4-201ENST00000335793 RBPJQ06330 500 aa13.45□□□□□ -0.26
CDC42EP4-201ENST00000335793 NCOR2Q9Y618 2525 aa13.45□□□□□ -0.26
CDC42EP4-201ENST00000335793 ABCA4P78363 2273 aa13.45□□□□□ -0.26
CDC42EP4-201ENST00000335793 LINC00869P0C866 280 aa13.45□□□□□ -0.26
CDC42EP4-201ENST00000335793 CT45A6P0DMU7 189 aa13.45□□□□□ -0.26
CDC42EP4-201ENST00000335793 CT45A5P0DMU8 189 aa13.45□□□□□ -0.26
CDC42EP4-201ENST00000335793 CT45A7P0DMV0 189 aa13.45□□□□□ -0.26
CDC42EP4-201ENST00000335793 LGALS4P56470 323 aa13.45□□□□□ -0.26
CDC42EP4-201ENST00000335793 RHOGP84095 191 aa13.45□□□□□ -0.26
CDC42EP4-201ENST00000335793 IGKV1OR2-108A0A075B7D4 117 aa13.45□□□□□ -0.26
CDC42EP4-201ENST00000335793 C8orf88P0DMB2 117 aa13.45□□□□□ -0.26
CDC42EP4-201ENST00000335793 CRYBA4P53673 196 aa13.45□□□□□ -0.26
CDC42EP4-201ENST00000335793 PRCDQ00LT1 54 aa13.45□□□□□ -0.26
CDC42EP4-201ENST00000335793 hDV102S1A0JD36 115 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 IGHV1-46P01743 117 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 REG1AP05451 166 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 PRR20EP86478 221 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 PRR20CP86479 221 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 PRR20DP86480 221 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 PRR20BP86481 221 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 PRR20AP86496 221 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 LRRC10Q5BKY1 277 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 C10orf55Q5SWW7 151 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 BLNKQ8WV28 456 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 MRPL20Q9BYC9 149 aaKnown RBP13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 IGHV3-21A0A0B4J1V1 117 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 PYYP10082 97 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 AREGP15514 252 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 CAMPP49913 170 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 SEM1Q6ZVN7 128 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 AP1S3Q96PC3 154 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 C9JCJ5 164 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 ORM2P19652 201 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 NPIPB3Q92617 1050 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 RAB37Q96AX2 223 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 FLYWCH2Q96CP2 140 aaKnown RBP13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 SLC25A10Q9UBX3 287 aaPredicted RBP13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 V9GYV3 84 aa13.44□□□□□ -0.26
CDC42EP4-201ENST00000335793 CHD8Q9HCK8 2581 aa13.43□□□□□ -0.26
CDC42EP4-201ENST00000335793 IGHV3-72A0A0B4J1Y9 119 aa13.43□□□□□ -0.26
CDC42EP4-201ENST00000335793 A0A1B0GV72 72 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms