RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 HLA-DRB1P01911 266 aa14.52□□□□□ -0.08
USP39-201ENST00000323701 SRP19P09132 144 aaKnown RBP14.52□□□□□ -0.08
USP39-201ENST00000323701 BCL2P10415 239 aa14.52□□□□□ -0.08
USP39-201ENST00000323701 CYP2G1PQ6ZSU1 146 aa14.52□□□□□ -0.08
USP39-201ENST00000323701 THAP8Q8NA92 274 aa14.52□□□□□ -0.08
USP39-201ENST00000323701 C2CD4CQ8TF44 421 aa14.52□□□□□ -0.08
USP39-201ENST00000323701 C22orf15Q8WYQ4 148 aa14.52□□□□□ -0.08
USP39-201ENST00000323701 FANCD2OSQ96PS1 177 aa14.52□□□□□ -0.08
USP39-201ENST00000323701 SSX3Q99909 188 aa14.52□□□□□ -0.08
USP39-201ENST00000323701 SLC35B3Q9H1N7 401 aa14.52□□□□□ -0.08
USP39-201ENST00000323701 SMCO4Q9NRQ5 59 aa14.52□□□□□ -0.08
USP39-201ENST00000323701 S4R3C0 116 aa14.52□□□□□ -0.08
USP39-201ENST00000323701 K7EIM0 57 aa14.51□□□□□ -0.09
USP39-201ENST00000323701 TMEM249Q2WGJ8 235 aa14.51□□□□□ -0.09
USP39-201ENST00000323701 CYB561D1Q8N8Q1 229 aa14.51□□□□□ -0.09
USP39-201ENST00000323701 TMEM37Q8WXS4 190 aa14.51□□□□□ -0.09
USP39-201ENST00000323701 A0A1W2PPV4 95 aa14.51□□□□□ -0.09
USP39-201ENST00000323701 PSMB11A5LHX3 300 aa14.51□□□□□ -0.09
USP39-201ENST00000323701 SMIM6P0DI80 62 aa14.51□□□□□ -0.09
USP39-201ENST00000323701 ARL14EPLP0DKL9 152 aa14.51□□□□□ -0.09
USP39-201ENST00000323701 FOLR2P14207 255 aa14.51□□□□□ -0.09
USP39-201ENST00000323701 MORN5Q5VZ52 161 aa14.51□□□□□ -0.09
USP39-201ENST00000323701 MIR17HGQ75NE6 70 aa14.51□□□□□ -0.09
USP39-201ENST00000323701 BCL6BQ8N143 479 aaPredicted RBP14.51□□□□□ -0.09
USP39-201ENST00000323701 C5orf56Q8N8D9 126 aa14.51□□□□□ -0.09
USP39-201ENST00000323701 TMEM116Q8NCL8 245 aa14.51□□□□□ -0.09
USP39-201ENST00000323701 OR5T1Q8NG75 326 aa14.51□□□□□ -0.09
USP39-201ENST00000323701 MBD6Q96DN6 1003 aa14.51□□□□□ -0.09
USP39-201ENST00000323701 C1RLQ9NZP8 487 aa14.51□□□□□ -0.09
USP39-201ENST00000323701 C7orf77A4D0Y5 90 aa14.5□□□□□ -0.09
USP39-201ENST00000323701 GATA3P23771 443 aa14.5□□□□□ -0.09
USP39-201ENST00000323701 CEBPGP53567 150 aa14.5□□□□□ -0.09
USP39-201ENST00000323701 LY6EQ16553 131 aa14.5□□□□□ -0.09
USP39-201ENST00000323701 RASL11BQ9BPW5 248 aa14.5□□□□□ -0.09
USP39-201ENST00000323701 KCNIP2Q9NS61 270 aa14.5□□□□□ -0.09
USP39-201ENST00000323701 TCRBV4S1A1TA0A5B7 111 aa14.5□□□□□ -0.09
USP39-201ENST00000323701 STAG3L2P0CL84 134 aa14.5□□□□□ -0.09
USP39-201ENST00000323701 STAG3L3P0CL85 134 aa14.5□□□□□ -0.09
USP39-201ENST00000323701 FAM78BQ5VT40 261 aa14.5□□□□□ -0.09
USP39-201ENST00000323701 CIARTQ8N365 385 aaPredicted RBP14.5□□□□□ -0.09
USP39-201ENST00000323701 WFDC11Q8NEX6 87 aa14.5□□□□□ -0.09
USP39-201ENST00000323701 DOK5Q9P104 306 aa14.5□□□□□ -0.09
USP39-201ENST00000323701 ATP6V0E1O15342 81 aa14.49□□□□□ -0.09
USP39-201ENST00000323701 SOX15O60248 233 aa14.49□□□□□ -0.09
USP39-201ENST00000323701 S100A8P05109 93 aa14.49□□□□□ -0.09
USP39-201ENST00000323701 RAB5BP61020 215 aa14.49□□□□□ -0.09
USP39-201ENST00000323701 KHDC3LQ587J8 217 aa14.49□□□□□ -0.09
USP39-201ENST00000323701 PATE2Q6UY27 113 aa14.49□□□□□ -0.09
USP39-201ENST00000323701 HIST1H2BAQ96A08 127 aa14.49□□□□□ -0.09
USP39-201ENST00000323701 ISOC2Q96AB3 205 aa14.49□□□□□ -0.09
USP39-201ENST00000323701 RBM14Q96PK6 669 aaKnown RBP14.49□□□□□ -0.09
USP39-201ENST00000323701 NPIPB5A8MRT5 1133 aa14.49□□□□□ -0.09
USP39-201ENST00000323701 H3BUX3 64 aa14.49□□□□□ -0.09
USP39-201ENST00000323701 M0R036 132 aa14.49□□□□□ -0.09
USP39-201ENST00000323701 HSPB1P04792 205 aaKnown RBP14.49□□□□□ -0.09
USP39-201ENST00000323701 CD81P60033 236 aa14.49□□□□□ -0.09
USP39-201ENST00000323701 SLC35E3Q7Z769 313 aa14.49□□□□□ -0.09
USP39-201ENST00000323701 TTC9CQ8N5M4 171 aa14.49□□□□□ -0.09
USP39-201ENST00000323701 C15orf54Q8N8G6 183 aa14.49□□□□□ -0.09
USP39-201ENST00000323701 TNFRSF19Q9NS68 423 aa14.49□□□□□ -0.09
USP39-201ENST00000323701 IGLV11-55A0A075B6I3 123 aa14.48□□□□□ -0.09
USP39-201ENST00000323701 LINC00587B1AMM8 73 aa14.48□□□□□ -0.09
USP39-201ENST00000323701 G3V318 75 aa14.48□□□□□ -0.09
USP39-201ENST00000323701 CORTO00230 105 aa14.48□□□□□ -0.09
USP39-201ENST00000323701 PMS2P11Q13670 270 aa14.48□□□□□ -0.09
USP39-201ENST00000323701 ETFRF1Q6IPR1 90 aa14.48□□□□□ -0.09
USP39-201ENST00000323701 PAGE4O60829 102 aa14.47□□□□□ -0.09
USP39-201ENST00000323701 FABP1P07148 127 aa14.47□□□□□ -0.09
USP39-201ENST00000323701 RHOBP62745 196 aa14.47□□□□□ -0.09
USP39-201ENST00000323701 SPNS3Q6ZMD2 512 aa14.47□□□□□ -0.09
USP39-201ENST00000323701 NANPQ8TBE9 248 aa14.47□□□□□ -0.09
USP39-201ENST00000323701 UHRF2Q96PU4 802 aa14.47□□□□□ -0.09
USP39-201ENST00000323701 ACANP16112 2415 aa14.47□□□□□ -0.09
USP39-201ENST00000323701 TRAV5A0A0B4J249 113 aa14.47□□□□□ -0.09
USP39-201ENST00000323701 UBE2G2P60604 165 aa14.47□□□□□ -0.09
USP39-201ENST00000323701 ZNF503Q96F45 646 aa14.47□□□□□ -0.09
USP39-201ENST00000323701 SMDT1Q9H4I9 107 aa14.47□□□□□ -0.09
USP39-201ENST00000323701 VAX2Q9UIW0 290 aa14.47□□□□□ -0.09
USP39-201ENST00000323701 SONP18583 2426 aaKnown RBP14.46□□□□□ -0.09
USP39-201ENST00000323701 S100A9P06702 114 aaKnown RBP14.46□□□□□ -0.09
USP39-201ENST00000323701 IGLC1P0CG04 106 aa14.46□□□□□ -0.09
USP39-201ENST00000323701 ECSCRQ19T08 205 aa14.46□□□□□ -0.09
USP39-201ENST00000323701 SGMS2Q8NHU3 365 aa14.46□□□□□ -0.09
USP39-201ENST00000323701 FUT9Q9Y231 359 aa14.46□□□□□ -0.09
USP39-201ENST00000323701 IGKV1-17P01599 117 aa14.46□□□□□ -0.1
USP39-201ENST00000323701 OR5G3P0C626 314 aa14.46□□□□□ -0.1
USP39-201ENST00000323701 SNRPEP62304 92 aaKnown RBP14.46□□□□□ -0.1
USP39-201ENST00000323701 KIAA0141Q14154 515 aaPredicted RBP14.46□□□□□ -0.1
USP39-201ENST00000323701 SOHLH1Q5JUK2 328 aa14.46□□□□□ -0.1
USP39-201ENST00000323701 FAM209BQ5JX69 171 aa14.46□□□□□ -0.1
USP39-201ENST00000323701 FAM90A2PQ658T7 463 aa14.46□□□□□ -0.1
USP39-201ENST00000323701 PRSS57Q6UWY2 283 aa14.46□□□□□ -0.1
USP39-201ENST00000323701 TMUB1Q9BVT8 246 aa14.46□□□□□ -0.1
USP39-201ENST00000323701 LINC00527Q9UJ94 153 aa14.46□□□□□ -0.1
USP39-201ENST00000323701 MOB4Q9Y3A3 225 aa14.46□□□□□ -0.1
USP39-201ENST00000323701 A6NDX4 124 aa14.45□□□□□ -0.1
USP39-201ENST00000323701 C5orf52A6NGY3 159 aa14.45□□□□□ -0.1
USP39-201ENST00000323701 UBE2CO00762 179 aa14.45□□□□□ -0.1
USP39-201ENST00000323701 NDUFB8O95169 186 aa14.45□□□□□ -0.1
USP39-201ENST00000323701 MEF2BQ02080 365 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms