RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SFTPA2Q8IWL1 248 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 NHLRC2Q8NBF2 726 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 TMEM116Q8NCL8 245 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 AKIRIN1Q9H9L7 192 aaPredicted RBP5.43□□□□□ -1.54
ZNF540-201ENST00000316433 KLRF1Q9NZS2 232 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 GAGE2DQ9UEU5 116 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 TEX50A0A1B0GTY4 177 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 C21orf140B9A014 251 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 IGLL5B9A064 214 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 INS-IGF2F8WCM5 200 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 F8WDY8 70 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 TCTAP57738 103 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 IZUMO4Q1ZYL8 232 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 GDF5OSQ5U4N7 250 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 AMTNQ6UX39 209 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 ZNF497Q6ZNH5 498 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 Q6ZRM9 215 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 Q6ZS92 163 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 PIP4P1Q86T03 277 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 NFE4Q86UQ8 179 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 CACNG5Q9UF02 275 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 DUSP13Q9UII6 198 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 RBP4P02753 201 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 FOXG1P55316 489 aaPredicted RBP5.42□□□□□ -1.54
ZNF540-201ENST00000316433 CENPWQ5EE01 88 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 IBA57Q5T440 356 aaKnown RBP5.42□□□□□ -1.54
ZNF540-201ENST00000316433 Q6P435 159 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 PPP1R32Q7Z5V6 425 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 SLC25A45Q8N413 288 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 DUX5Q96PT3 197 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 SIGLEC9Q9Y336 463 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 MT-CO3P00414 261 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 MOSP00540 346 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 ZNF883P0CG24 379 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 ARL14EPLP0DKL9 152 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 EVI2AP22794 236 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 SSR4P51571 173 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 ZNF718Q3SXZ3 478 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 BCL6BQ8N143 479 aaPredicted RBP5.42□□□□□ -1.54
ZNF540-201ENST00000316433 ENY2Q9NPA8 101 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 LOXL2Q9Y4K0 774 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 YTHDF2Q9Y5A9 579 aaKnown RBP5.42□□□□□ -1.54
ZNF540-201ENST00000316433 SHANK1Q9Y566 2161 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 TRGV8A0A0C4DH27 118 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 IGKV1-6A0A0C4DH72 117 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 RPL7P18124 248 aaKnown RBP5.42□□□□□ -1.54
ZNF540-201ENST00000316433 MFAP2P55001 183 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 TFF2Q03403 129 aa5.42□□□□□ -1.54
ZNF540-201ENST00000316433 RBMXL3Q8N7X1 1067 aaKnown RBP5.42□□□□□ -1.54
ZNF540-201ENST00000316433 TRANK1O15050 2925 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 IGHV5-10-1A0A0J9YXX1 117 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 C2CD4DB7Z1M9 353 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 J3QT63 122 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 BCL3P20749 454 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 CXCL12P48061 93 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 PPDPFLQ8WWR9 84 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 FOXB1Q99853 325 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 SPRY4Q9C004 299 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 OBP2BQ9NPH6 170 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 NHP2Q9NX24 153 aaKnown RBP5.41□□□□□ -1.54
ZNF540-201ENST00000316433 A0A0J9YW62 118 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 TMEM262E9PQX1 116 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 F5H768 121 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 P04436 131 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 CSN3P07498 182 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 CDAP32320 146 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 PRR30Q53SZ7 412 aaPredicted RBP5.41□□□□□ -1.54
ZNF540-201ENST00000316433 PQLC2Q6ZP29 291 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 Q8N7P7 452 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 SAP25Q8TEE9 199 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 RPEQ96AT9 228 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 AJUBAQ96IF1 538 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 HSD17B10Q99714 261 aaKnown RBP5.41□□□□□ -1.54
ZNF540-201ENST00000316433 EMC6Q9BV81 110 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 DEFB126Q9BYW3 111 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 LINC00574Q9H8X3 128 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 PRDM6Q9NQX0 595 aa5.41□□□□□ -1.54
ZNF540-201ENST00000316433 F11RQ9Y624 299 aaKnown RBP5.41□□□□□ -1.54
ZNF540-201ENST00000316433 C5orf63A6NC05 138 aa5.4□□□□□ -1.54
ZNF540-201ENST00000316433 SCRG1O75711 98 aa5.4□□□□□ -1.54
ZNF540-201ENST00000316433 LINC00694P0DN24 101 aa5.4□□□□□ -1.54
ZNF540-201ENST00000316433 CSN1S1P47710 185 aa5.4□□□□□ -1.54
ZNF540-201ENST00000316433 MEOX1P50221 254 aa5.4□□□□□ -1.54
ZNF540-201ENST00000316433 CFAP126Q5VTH2 177 aa5.4□□□□□ -1.54
ZNF540-201ENST00000316433 FAM19A5Q7Z5A7 132 aaPredicted RBP5.4□□□□□ -1.54
ZNF540-201ENST00000316433 SRXN1Q9BYN0 137 aa5.4□□□□□ -1.54
ZNF540-201ENST00000316433 FGF23Q9GZV9 251 aaPredicted RBP5.4□□□□□ -1.54
ZNF540-201ENST00000316433 CCL28Q9NRJ3 127 aa5.4□□□□□ -1.54
ZNF540-201ENST00000316433 RALGAPA1Q6GYQ0 2036 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 IGKV1D-13A0A0B4J2D9 117 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 LOC107984640A0A0U1RRK4 108 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 C17orf51A8MQB3 221 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 PRSS46E5RG02 174 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 K7ESF4 209 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 RRHO14718 337 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 CHEK1O14757 476 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 NCR2O95944 276 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 IGKV1-39P01597 117 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 IGKV1D-39P04432 117 aa5.4□□□□□ -1.55
ZNF540-201ENST00000316433 IGKV1-13P0DP09 117 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms