RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 PINLYPA6NC86 204 aa11.77□□□□□ -0.53
COL1A2-201ENST00000297268 SLX1AQ9BQ83 275 aa11.77□□□□□ -0.53
COL1A2-201ENST00000297268 MPDZO75970 2070 aa11.76□□□□□ -0.53
COL1A2-201ENST00000297268 CFPP27918 469 aa11.76□□□□□ -0.53
COL1A2-201ENST00000297268 SIGMAR1Q99720 223 aa11.76□□□□□ -0.53
COL1A2-201ENST00000297268 A0A0G2JRQ6 117 aa11.76□□□□□ -0.53
COL1A2-201ENST00000297268 A8MWP6 167 aa11.76□□□□□ -0.53
COL1A2-201ENST00000297268 TRGV3P03979 118 aa11.76□□□□□ -0.53
COL1A2-201ENST00000297268 CFHR1Q03591 330 aa11.76□□□□□ -0.53
COL1A2-201ENST00000297268 ZNF585BQ52M93 769 aa11.76□□□□□ -0.53
COL1A2-201ENST00000297268 RNF125Q96EQ8 232 aa11.76□□□□□ -0.53
COL1A2-201ENST00000297268 DMRTA2Q96SC8 542 aa11.76□□□□□ -0.53
COL1A2-201ENST00000297268 VCX2Q9H322 139 aa11.76□□□□□ -0.53
COL1A2-201ENST00000297268 RRN3P1Q2M238 152 aa11.76□□□□□ -0.53
COL1A2-201ENST00000297268 CLEC2AQ6UVW9 174 aa11.76□□□□□ -0.53
COL1A2-201ENST00000297268 LHFPL4Q7Z7J7 247 aa11.76□□□□□ -0.53
COL1A2-201ENST00000297268 IFI27L1Q96BM0 104 aa11.76□□□□□ -0.53
COL1A2-201ENST00000297268 RAX2Q96IS3 184 aa11.76□□□□□ -0.53
COL1A2-201ENST00000297268 DNAL4O96015 105 aa11.76□□□□□ -0.53
COL1A2-201ENST00000297268 SUMO2P61956 95 aaKnown RBP11.76□□□□□ -0.53
COL1A2-201ENST00000297268 FAM71F2Q6NXP2 309 aa11.76□□□□□ -0.53
COL1A2-201ENST00000297268 RALGAPA1Q6GYQ0 2036 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 NPFFO15130 113 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 SNRPD3P62318 126 aaKnown RBP11.75□□□□□ -0.53
COL1A2-201ENST00000297268 NAA38Q9BRA0 125 aaKnown RBP11.75□□□□□ -0.53
COL1A2-201ENST00000297268 PSPNO60542 156 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 BSPH1Q075Z2 132 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 SAMD5Q5TGI4 173 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 PVRIGQ6DKI7 326 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 MRPL52Q86TS9 123 aaKnown RBP11.75□□□□□ -0.53
COL1A2-201ENST00000297268 hDV102S1A0JD36 115 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 ARTNQ5T4W7 220 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 TMEM42Q69YG0 159 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 GGNQ86UU5 652 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 VKORC1Q9BQB6 163 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 NXT2Q9NPJ8 142 aaKnown RBP11.75□□□□□ -0.53
COL1A2-201ENST00000297268 RTTNQ86VV8 2226 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 IGHV3OR16-10A0A075B7F0 116 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 C17orf100A8MU93 164 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 IGKCP01834 107 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 PRB3Q04118 309 aaPredicted RBP11.75□□□□□ -0.53
COL1A2-201ENST00000297268 SDK2Q58EX2 2172 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 RASL11AQ6T310 242 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 PPP1R27Q86WC6 154 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 LINC01560Q8TB33 94 aa11.75□□□□□ -0.53
COL1A2-201ENST00000297268 DMRTC2Q8IXT2 367 aaPredicted RBP11.74□□□□□ -0.53
COL1A2-201ENST00000297268 PSMB11A5LHX3 300 aa11.74□□□□□ -0.53
COL1A2-201ENST00000297268 MPV17L2Q567V2 206 aa11.74□□□□□ -0.53
COL1A2-201ENST00000297268 CLEC19AQ6UXS0 136 aa11.74□□□□□ -0.53
COL1A2-201ENST00000297268 LY96Q9Y6Y9 160 aa11.74□□□□□ -0.53
COL1A2-201ENST00000297268 CACNA1DQ01668 2161 aa11.74□□□□□ -0.53
COL1A2-201ENST00000297268 TRAV8-2A0A0B4J237 113 aa11.74□□□□□ -0.53
COL1A2-201ENST00000297268 IGHV2-70P01814 119 aa11.74□□□□□ -0.53
COL1A2-201ENST00000297268 PRB4P10163 310 aaPredicted RBP11.74□□□□□ -0.53
COL1A2-201ENST00000297268 EVI2AP22794 236 aa11.74□□□□□ -0.53
COL1A2-201ENST00000297268 UCNP55089 124 aa11.74□□□□□ -0.53
COL1A2-201ENST00000297268 ZNF479Q96JC4 524 aa11.74□□□□□ -0.53
COL1A2-201ENST00000297268 ASCL2Q99929 193 aa11.74□□□□□ -0.53
COL1A2-201ENST00000297268 TRAV3A0A0B4J244 114 aa11.74□□□□□ -0.53
COL1A2-201ENST00000297268 IGKV3OR2-268A0A0C4DH90 116 aa11.74□□□□□ -0.53
COL1A2-201ENST00000297268 C8orf46Q8TAG6 207 aa11.74□□□□□ -0.53
COL1A2-201ENST00000297268 SBF1O95248 1867 aa11.74□□□□□ -0.53
COL1A2-201ENST00000297268 HOXA3O43365 443 aaPredicted RBP11.73□□□□□ -0.53
COL1A2-201ENST00000297268 PPBPP02775 128 aa11.73□□□□□ -0.53
COL1A2-201ENST00000297268 UBE2V1Q13404 147 aa11.73□□□□□ -0.53
COL1A2-201ENST00000297268 Q6ZRM9 215 aa11.73□□□□□ -0.53
COL1A2-201ENST00000297268 DUX5Q96PT3 197 aa11.73□□□□□ -0.53
COL1A2-201ENST00000297268 RSPO3Q9BXY4 272 aaPredicted RBP11.73□□□□□ -0.53
COL1A2-201ENST00000297268 PPIFP30405 207 aaKnown RBP11.73□□□□□ -0.53
COL1A2-201ENST00000297268 RNASE4P34096 147 aaKnown RBP11.73□□□□□ -0.53
COL1A2-201ENST00000297268 SRSF1Q07955 248 aaKnown RBP eCLIP11.73□□□□□ -0.53
COL1A2-201ENST00000297268 MOB4Q9Y3A3 225 aa11.73□□□□□ -0.53
COL1A2-201ENST00000297268 MRPS16Q9Y3D3 137 aaKnown RBP11.73□□□□□ -0.53
COL1A2-201ENST00000297268 TMPRSS3P57727 454 aa11.73□□□□□ -0.53
COL1A2-201ENST00000297268 ERVK11-1P61568 191 aa11.73□□□□□ -0.53
COL1A2-201ENST00000297268 C10orf91Q5T1B1 145 aa11.73□□□□□ -0.53
COL1A2-201ENST00000297268 NUP35Q8NFH5 326 aa11.73□□□□□ -0.53
COL1A2-201ENST00000297268 POLR3KQ9Y2Y1 108 aaPredicted RBP11.73□□□□□ -0.53
COL1A2-201ENST00000297268 H7C1H1 209 aa11.73□□□□□ -0.53
COL1A2-201ENST00000297268 NTF4P34130 210 aa11.73□□□□□ -0.53
COL1A2-201ENST00000297268 OR9G4Q8NGQ1 327 aa11.73□□□□□ -0.53
COL1A2-201ENST00000297268 TNFRSF18Q9Y5U5 241 aa11.73□□□□□ -0.53
COL1A2-201ENST00000297268 SELENOKQ9Y6D0 94 aa11.73□□□□□ -0.53
COL1A2-201ENST00000297268 NBR2O15453 112 aa11.73□□□□□ -0.53
COL1A2-201ENST00000297268 SP9P0CG40 484 aa11.73□□□□□ -0.53
COL1A2-201ENST00000297268 A0A087X0K7 114 aa11.72□□□□□ -0.53
COL1A2-201ENST00000297268 SLC25A48Q6ZT89 311 aaKnown RBP11.72□□□□□ -0.53
COL1A2-201ENST00000297268 SPOCK3Q9BQ16 436 aa11.72□□□□□ -0.53
COL1A2-201ENST00000297268 DOCK6Q96HP0 2047 aa11.72□□□□□ -0.53
COL1A2-201ENST00000297268 TRBV6-6A0A0A6YYG2 114 aa11.72□□□□□ -0.53
COL1A2-201ENST00000297268 LTBRP36941 435 aa11.72□□□□□ -0.53
COL1A2-201ENST00000297268 OR13C6PQ8NH95 151 aa11.72□□□□□ -0.53
COL1A2-201ENST00000297268 A0A0G2JLM5 398 aa11.72□□□□□ -0.53
COL1A2-201ENST00000297268 C10orf55Q5SWW7 151 aa11.72□□□□□ -0.53
COL1A2-201ENST00000297268 JMJD8Q96S16 334 aa11.72□□□□□ -0.53
COL1A2-201ENST00000297268 TMEM133Q9H2Q1 129 aa11.72□□□□□ -0.53
COL1A2-201ENST00000297268 IGHV1-18A0A0C4DH31 117 aa11.71□□□□□ -0.53
COL1A2-201ENST00000297268 LINC00473A8K010 186 aa11.71□□□□□ -0.53
COL1A2-201ENST00000297268 GUSBP1Q15486 140 aa11.71□□□□□ -0.53
COL1A2-201ENST00000297268 Q6ZS49 121 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms