RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 ORMDL2Q53FV1 153 aa11.89□□□□□ -0.51
CUX2-201ENST00000261726 THBDP07204 575 aa11.89□□□□□ -0.51
CUX2-201ENST00000261726 HEATR5BQ9P2D3 2071 aa11.89□□□□□ -0.51
CUX2-201ENST00000261726 PQLC2LA1A4F0 135 aa11.89□□□□□ -0.51
CUX2-201ENST00000261726 A8MWV9 139 aa11.89□□□□□ -0.51
CUX2-201ENST00000261726 CSRP2Q16527 193 aa11.89□□□□□ -0.51
CUX2-201ENST00000261726 SRSF7Q16629 238 aaKnown RBP eCLIP11.89□□□□□ -0.51
CUX2-201ENST00000261726 TMEM144Q7Z5S9 345 aa11.89□□□□□ -0.51
CUX2-201ENST00000261726 RCHY1Q96PM5 261 aa11.89□□□□□ -0.51
CUX2-201ENST00000261726 TRAV9-1A0A075B6T8 112 aa11.89□□□□□ -0.51
CUX2-201ENST00000261726 NPIPB13A6NJU9 1138 aa11.89□□□□□ -0.51
CUX2-201ENST00000261726 NPIPB5A8MRT5 1133 aa11.89□□□□□ -0.51
CUX2-201ENST00000261726 MS4A6AQ9H2W1 248 aa11.89□□□□□ -0.51
CUX2-201ENST00000261726 ANK1P16157 1881 aa11.89□□□□□ -0.51
CUX2-201ENST00000261726 PRTN3P24158 256 aa11.89□□□□□ -0.51
CUX2-201ENST00000261726 IGLV3-21P80748 117 aaPredicted RBP11.89□□□□□ -0.51
CUX2-201ENST00000261726 TMEM249Q2WGJ8 235 aa11.89□□□□□ -0.51
CUX2-201ENST00000261726 ERG28Q9UKR5 140 aa11.89□□□□□ -0.51
CUX2-201ENST00000261726 TIMM23O14925 209 aa11.88□□□□□ -0.51
CUX2-201ENST00000261726 LY6DQ14210 128 aa11.88□□□□□ -0.51
CUX2-201ENST00000261726 CARHSP1Q9Y2V2 147 aaKnown RBP11.88□□□□□ -0.51
CUX2-201ENST00000261726 TMEM219Q86XT9 240 aa11.88□□□□□ -0.51
CUX2-201ENST00000261726 RNASE6Q93091 150 aaKnown RBP11.88□□□□□ -0.51
CUX2-201ENST00000261726 CCL20P78556 96 aa11.88□□□□□ -0.51
CUX2-201ENST00000261726 MORN3Q6PF18 240 aaPredicted RBP11.88□□□□□ -0.51
CUX2-201ENST00000261726 C1orf122Q6ZSJ8 110 aa11.88□□□□□ -0.51
CUX2-201ENST00000261726 ZNF625Q96I27 306 aaPredicted RBP11.88□□□□□ -0.51
CUX2-201ENST00000261726 EDA2RQ9HAV5 297 aa11.88□□□□□ -0.51
CUX2-201ENST00000261726 MORN2Q502X0 79 aa11.88□□□□□ -0.51
CUX2-201ENST00000261726 ATP5L2Q7Z4Y8 100 aa11.88□□□□□ -0.51
CUX2-201ENST00000261726 C18orf12Q96KH6 178 aa11.88□□□□□ -0.51
CUX2-201ENST00000261726 WNT2P09544 360 aa11.87□□□□□ -0.51
CUX2-201ENST00000261726 ORAOV1Q8WV07 137 aa11.87□□□□□ -0.51
CUX2-201ENST00000261726 SIP14410 1827 aa11.87□□□□□ -0.51
CUX2-201ENST00000261726 IGKV1D-13A0A0B4J2D9 117 aa11.87□□□□□ -0.51
CUX2-201ENST00000261726 IGKV1-13P0DP09 117 aa11.87□□□□□ -0.51
CUX2-201ENST00000261726 RPL15P61313 204 aaKnown RBP11.87□□□□□ -0.51
CUX2-201ENST00000261726 ZXDCQ2QGD7 858 aaPredicted RBP11.87□□□□□ -0.51
CUX2-201ENST00000261726 A0A087WWC5 75 aa11.87□□□□□ -0.51
CUX2-201ENST00000261726 TRAV5A0A0B4J249 113 aa11.87□□□□□ -0.51
CUX2-201ENST00000261726 ZNF318Q5VUA4 2279 aa11.87□□□□□ -0.51
CUX2-201ENST00000261726 A0A1W2PR77 199 aa11.87□□□□□ -0.51
CUX2-201ENST00000261726 NCR2O95944 276 aa11.87□□□□□ -0.51
CUX2-201ENST00000261726 ZNF474Q6S9Z5 364 aaPredicted RBP11.87□□□□□ -0.51
CUX2-201ENST00000261726 FAM90A1Q86YD7 464 aa11.87□□□□□ -0.51
CUX2-201ENST00000261726 OR10W1Q8NGF6 305 aa11.87□□□□□ -0.51
CUX2-201ENST00000261726 F8WEM9 126 aa11.87□□□□□ -0.51
CUX2-201ENST00000261726 TRGV1A0A0A0MS02 117 aa11.86□□□□□ -0.51
CUX2-201ENST00000261726 EIF4EBP2Q13542 120 aaPredicted RBP11.86□□□□□ -0.51
CUX2-201ENST00000261726 GAGE2EQ4V326 116 aa11.86□□□□□ -0.51
CUX2-201ENST00000261726 ZNF479Q96JC4 524 aa11.86□□□□□ -0.51
CUX2-201ENST00000261726 NAA38Q9BRA0 125 aaKnown RBP11.86□□□□□ -0.51
CUX2-201ENST00000261726 GAGE2DQ9UEU5 116 aa11.86□□□□□ -0.51
CUX2-201ENST00000261726 IFI6P09912 130 aa11.86□□□□□ -0.51
CUX2-201ENST00000261726 OR9G9P0C7N8 305 aa11.86□□□□□ -0.51
CUX2-201ENST00000261726 DMRTC2Q8IXT2 367 aaPredicted RBP11.86□□□□□ -0.51
CUX2-201ENST00000261726 TMEM170AQ8WVE7 144 aa11.86□□□□□ -0.51
CUX2-201ENST00000261726 SIGMAR1Q99720 223 aa11.86□□□□□ -0.51
CUX2-201ENST00000261726 SAMD5Q5TGI4 173 aa11.86□□□□□ -0.51
CUX2-201ENST00000261726 SVILO95425 2214 aa11.86□□□□□ -0.51
CUX2-201ENST00000261726 MGAMO43451 1857 aa11.86□□□□□ -0.51
CUX2-201ENST00000261726 YPEL1O60688 119 aa11.86□□□□□ -0.51
CUX2-201ENST00000261726 LAGE3Q14657 143 aa11.86□□□□□ -0.51
CUX2-201ENST00000261726 YPEL2Q96QA6 119 aa11.86□□□□□ -0.51
CUX2-201ENST00000261726 SHISA3A0PJX4 238 aa11.86□□□□□ -0.51
CUX2-201ENST00000261726 TRAV9-2A0A087WT02 112 aa11.86□□□□□ -0.51
CUX2-201ENST00000261726 SRSF3P84103 164 aaKnown RBP11.86□□□□□ -0.51
CUX2-201ENST00000261726 SCN10AQ9Y5Y9 1956 aa11.86□□□□□ -0.51
CUX2-201ENST00000261726 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.85□□□□□ -0.51
CUX2-201ENST00000261726 RPL32P62910 135 aaKnown RBP11.85□□□□□ -0.51
CUX2-201ENST00000261726 ZNF876PQ49A33 203 aa11.85□□□□□ -0.51
CUX2-201ENST00000261726 IFI27L1Q96BM0 104 aa11.85□□□□□ -0.51
CUX2-201ENST00000261726 GAGE13Q4V321 117 aa11.85□□□□□ -0.51
CUX2-201ENST00000261726 LSM4Q9Y4Z0 139 aaKnown RBP11.85□□□□□ -0.51
CUX2-201ENST00000261726 ZSWIM8A7E2V4 1837 aa11.85□□□□□ -0.51
CUX2-201ENST00000261726 OVOL1O14753 267 aa11.85□□□□□ -0.51
CUX2-201ENST00000261726 LGALS1P09382 135 aaKnown RBP11.85□□□□□ -0.51
CUX2-201ENST00000261726 CEACAM1P13688 526 aa11.85□□□□□ -0.51
CUX2-201ENST00000261726 ZNF362Q5T0B9 420 aaPredicted RBP11.85□□□□□ -0.51
CUX2-201ENST00000261726 OCC1Q8TAD7 63 aa11.85□□□□□ -0.51
CUX2-201ENST00000261726 SPTBP11277 2137 aa11.85□□□□□ -0.51
CUX2-201ENST00000261726 TRAV41A0A0B4J266 112 aa11.84□□□□□ -0.51
CUX2-201ENST00000261726 LRRC37A2A6NM11 1700 aa11.84□□□□□ -0.51
CUX2-201ENST00000261726 TRBV6-7A0A0A0MS04 114 aa11.84□□□□□ -0.51
CUX2-201ENST00000261726 ZNF497Q6ZNH5 498 aa11.84□□□□□ -0.51
CUX2-201ENST00000261726 A6NNC1 897 aa11.84□□□□□ -0.51
CUX2-201ENST00000261726 GREM1O60565 184 aa11.84□□□□□ -0.51
CUX2-201ENST00000261726 ATRAIDQ6UW56 229 aa11.84□□□□□ -0.51
CUX2-201ENST00000261726 RNF222A6NCQ9 220 aa11.84□□□□□ -0.51
CUX2-201ENST00000261726 LILRA1O75019 489 aa11.84□□□□□ -0.51
CUX2-201ENST00000261726 KLRD1Q13241 179 aa11.84□□□□□ -0.51
CUX2-201ENST00000261726 EFNB3Q15768 340 aa11.84□□□□□ -0.51
CUX2-201ENST00000261726 MLNRO43193 412 aa11.84□□□□□ -0.51
CUX2-201ENST00000261726 ACTL10Q5JWF8 245 aa11.84□□□□□ -0.51
CUX2-201ENST00000261726 VMO1Q7Z5L0 202 aa11.84□□□□□ -0.51
CUX2-201ENST00000261726 NDPQ00604 133 aa11.83□□□□□ -0.51
CUX2-201ENST00000261726 OCIAD2Q56VL3 154 aa11.83□□□□□ -0.52
CUX2-201ENST00000261726 F2Z2F3 143 aa11.83□□□□□ -0.52
CUX2-201ENST00000261726 TGFBR3LH3BV60 316 aa11.83□□□□□ -0.52
CUX2-201ENST00000261726 VWC2LB2RUY7 222 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms