RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 NAGKQ9UJ70 344 aa17.61■□□□□ 0.41
SMARCD2-201ENST00000225742 F11RQ9Y624 299 aaKnown RBP17.61■□□□□ 0.41
SMARCD2-201ENST00000225742 PPIAL4CA0A0B4J2A2 164 aa17.6■□□□□ 0.41
SMARCD2-201ENST00000225742 HYPMO75409 117 aa17.6■□□□□ 0.41
SMARCD2-201ENST00000225742 SCGB1D1O95968 90 aa17.6■□□□□ 0.41
SMARCD2-201ENST00000225742 PPIAL4GP0DN37 164 aa17.6■□□□□ 0.41
SMARCD2-201ENST00000225742 MFAP2P55001 183 aa17.6■□□□□ 0.41
SMARCD2-201ENST00000225742 TMEM183BQ1AE95 376 aa17.6■□□□□ 0.41
SMARCD2-201ENST00000225742 LBHQ53QV2 105 aaPredicted RBP17.6■□□□□ 0.41
SMARCD2-201ENST00000225742 HCP5Q6MZN7 132 aa17.6■□□□□ 0.41
SMARCD2-201ENST00000225742 PPP1R27Q86WC6 154 aa17.6■□□□□ 0.41
SMARCD2-201ENST00000225742 BAGE2Q86Y30 109 aa17.6■□□□□ 0.41
SMARCD2-201ENST00000225742 TMEM190Q8WZ59 177 aa17.6■□□□□ 0.41
SMARCD2-201ENST00000225742 A0A1B0GUS0 222 aa17.59■□□□□ 0.41
SMARCD2-201ENST00000225742 FXYD3Q14802 87 aa17.59■□□□□ 0.41
SMARCD2-201ENST00000225742 ZNF672Q499Z4 452 aaPredicted RBP17.59■□□□□ 0.41
SMARCD2-201ENST00000225742 OR10J3Q5JRS4 329 aa17.59■□□□□ 0.41
SMARCD2-201ENST00000225742 BAGE3Q86Y29 109 aa17.59■□□□□ 0.41
SMARCD2-201ENST00000225742 LINC01560Q8TB33 94 aa17.59■□□□□ 0.41
SMARCD2-201ENST00000225742 WIPF2Q8TF74 440 aaPredicted RBP17.59■□□□□ 0.41
SMARCD2-201ENST00000225742 RPEQ96AT9 228 aa17.59■□□□□ 0.41
SMARCD2-201ENST00000225742 MBD6Q96DN6 1003 aa17.59■□□□□ 0.41
SMARCD2-201ENST00000225742 GRAMD2BQ96HH9 432 aa17.59■□□□□ 0.41
SMARCD2-201ENST00000225742 NDUFAF3Q9BU61 184 aa17.59■□□□□ 0.41
SMARCD2-201ENST00000225742 NAT8BQ9UHF3 227 aa17.59■□□□□ 0.41
SMARCD2-201ENST00000225742 IGHV3-48P01763 117 aa17.58■□□□□ 0.41
SMARCD2-201ENST00000225742 FAM87AP0C7U9 286 aa17.58■□□□□ 0.41
SMARCD2-201ENST00000225742 OR8B3Q8NGG8 313 aa17.58■□□□□ 0.41
SMARCD2-201ENST00000225742 OR8B2Q96RD0 313 aa17.58■□□□□ 0.41
SMARCD2-201ENST00000225742 SERTAD4Q9NUC0 356 aa17.58■□□□□ 0.41
SMARCD2-201ENST00000225742 LY6LH3BQJ8 138 aa17.58■□□□□ 0.4
SMARCD2-201ENST00000225742 SERF1AO75920 110 aa17.58■□□□□ 0.4
SMARCD2-201ENST00000225742 LINC00310P59036 64 aa17.58■□□□□ 0.4
SMARCD2-201ENST00000225742 OR1B1Q8NGR6 318 aa17.58■□□□□ 0.4
SMARCD2-201ENST00000225742 EPDR1Q9UM22 224 aa17.58■□□□□ 0.4
SMARCD2-201ENST00000225742 KLF12Q9Y4X4 402 aa17.58■□□□□ 0.4
SMARCD2-201ENST00000225742 TEX22C9J3V5 150 aa17.57■□□□□ 0.4
SMARCD2-201ENST00000225742 ORM2P19652 201 aa17.57■□□□□ 0.4
SMARCD2-201ENST00000225742 CNTFRP26992 372 aa17.57■□□□□ 0.4
SMARCD2-201ENST00000225742 LY6G5BQ8NDX9 201 aa17.57■□□□□ 0.4
SMARCD2-201ENST00000225742 RIF1Q5UIP0 2472 aaKnown RBP17.57■□□□□ 0.4
SMARCD2-201ENST00000225742 SPENQ96T58 3664 aaKnown RBP17.57■□□□□ 0.4
SMARCD2-201ENST00000225742 MOSP00540 346 aa17.56■□□□□ 0.4
SMARCD2-201ENST00000225742 ACACAQ13085 2346 aa17.56■□□□□ 0.4
SMARCD2-201ENST00000225742 LYNX1G3V0Z9 82 aa17.56■□□□□ 0.4
SMARCD2-201ENST00000225742 LIPFP07098 398 aa17.56■□□□□ 0.4
SMARCD2-201ENST00000225742 LYNX1P0DP58 116 aa17.56■□□□□ 0.4
SMARCD2-201ENST00000225742 UCNP55089 124 aa17.56■□□□□ 0.4
SMARCD2-201ENST00000225742 C1orf194Q5T5A4 169 aa17.56■□□□□ 0.4
SMARCD2-201ENST00000225742 ZNF331Q9NQX6 463 aaPredicted RBP17.56■□□□□ 0.4
SMARCD2-201ENST00000225742 CEP250Q9BV73 2442 aa17.55■□□□□ 0.4
SMARCD2-201ENST00000225742 FAM90A27PA6NNH2 459 aa17.55■□□□□ 0.4
SMARCD2-201ENST00000225742 NBEAP1P0C6P0 100 aa17.55■□□□□ 0.4
SMARCD2-201ENST00000225742 FRMD6-AS1P0C7T7 363 aa17.55■□□□□ 0.4
SMARCD2-201ENST00000225742 BRS3P32247 399 aa17.55■□□□□ 0.4
SMARCD2-201ENST00000225742 UBE2G1P62253 170 aa17.55■□□□□ 0.4
SMARCD2-201ENST00000225742 USF2Q15853 346 aaPredicted RBP17.55■□□□□ 0.4
SMARCD2-201ENST00000225742 LINC00479Q96M42 142 aa17.55■□□□□ 0.4
SMARCD2-201ENST00000225742 MSRB2Q9Y3D2 182 aa17.55■□□□□ 0.4
SMARCD2-201ENST00000225742 AKAP13Q12802 2813 aa17.54■□□□□ 0.4
SMARCD2-201ENST00000225742 SLC25A5P05141 298 aaKnown RBP17.54■□□□□ 0.4
SMARCD2-201ENST00000225742 HIST1H1EP10412 219 aaKnown RBP17.54■□□□□ 0.4
SMARCD2-201ENST00000225742 COX7A1P24310 79 aa17.54■□□□□ 0.4
SMARCD2-201ENST00000225742 TCL1AP56279 114 aa17.54■□□□□ 0.4
SMARCD2-201ENST00000225742 RAB1BQ9H0U4 201 aa17.54■□□□□ 0.4
SMARCD2-201ENST00000225742 UNQ6494/PRO21346Q6UXR6 183 aa17.54■□□□□ 0.4
SMARCD2-201ENST00000225742 C5orf17Q8NAS9 161 aa17.54■□□□□ 0.4
SMARCD2-201ENST00000225742 NUDT10Q8NFP7 164 aa17.54■□□□□ 0.4
SMARCD2-201ENST00000225742 SRSF12Q8WXF0 261 aaKnown RBP17.54■□□□□ 0.4
SMARCD2-201ENST00000225742 NUDT11Q96G61 164 aa17.54■□□□□ 0.4
SMARCD2-201ENST00000225742 GNB4Q9HAV0 340 aa17.54■□□□□ 0.4
SMARCD2-201ENST00000225742 TMEM14CQ9P0S9 112 aa17.54■□□□□ 0.4
SMARCD2-201ENST00000225742 ZFHX2Q9C0A1 2572 aaPredicted RBP17.53■□□□□ 0.4
SMARCD2-201ENST00000225742 PGPA6NDG6 321 aa17.53■□□□□ 0.4
SMARCD2-201ENST00000225742 GP9P14770 177 aa17.53■□□□□ 0.4
SMARCD2-201ENST00000225742 Q6ZWC4 215 aa17.53■□□□□ 0.4
SMARCD2-201ENST00000225742 RBM14Q96PK6 669 aaKnown RBP17.53■□□□□ 0.4
SMARCD2-201ENST00000225742 ATG101Q9BSB4 218 aa17.53■□□□□ 0.4
SMARCD2-201ENST00000225742 C7orf69Q9H7B7 122 aa17.53■□□□□ 0.4
SMARCD2-201ENST00000225742 HIGD1AQ9Y241 93 aa17.53■□□□□ 0.4
SMARCD2-201ENST00000225742 ANKRD11Q6UB99 2663 aaPredicted RBP17.53■□□□□ 0.4
SMARCD2-201ENST00000225742 KIR2DL5BA0A0G2JN68 375 aa17.52■□□□□ 0.4
SMARCD2-201ENST00000225742 KIR2DL5BA0A0G2JPC4 375 aa17.52■□□□□ 0.4
SMARCD2-201ENST00000225742 CCL21O00585 134 aa17.52■□□□□ 0.4
SMARCD2-201ENST00000225742 SIAH2O43255 324 aa17.52■□□□□ 0.4
SMARCD2-201ENST00000225742 APCSP02743 223 aa17.52■□□□□ 0.4
SMARCD2-201ENST00000225742 TPTE2P1Q5T6R2 138 aa17.52■□□□□ 0.4
SMARCD2-201ENST00000225742 RUSC1-AS1Q66K80 236 aa17.52■□□□□ 0.4
SMARCD2-201ENST00000225742 KIR2DL5AQ8N109 375 aa17.52■□□□□ 0.4
SMARCD2-201ENST00000225742 LINC00469Q8N7U9 141 aa17.52■□□□□ 0.4
SMARCD2-201ENST00000225742 NHLRC2Q8NBF2 726 aa17.52■□□□□ 0.4
SMARCD2-201ENST00000225742 FMC1Q96HJ9 113 aa17.52■□□□□ 0.4
SMARCD2-201ENST00000225742 GPR82Q96P67 336 aa17.52■□□□□ 0.4
SMARCD2-201ENST00000225742 SAMD10Q9BYL1 202 aa17.52■□□□□ 0.4
SMARCD2-201ENST00000225742 FBXL15Q9H469 300 aa17.52■□□□□ 0.4
SMARCD2-201ENST00000225742 POLR3KQ9Y2Y1 108 aaPredicted RBP17.52■□□□□ 0.4
SMARCD2-201ENST00000225742 DMXL1Q9Y485 3027 aa17.52■□□□□ 0.4
SMARCD2-201ENST00000225742 PCNX1Q96RV3 2341 aa17.52■□□□□ 0.39
SMARCD2-201ENST00000225742 TRAV34A0A0B4J273 112 aa17.51■□□□□ 0.39
SMARCD2-201ENST00000225742 I3L2K1 104 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms