RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Tnfsf15Q5UBV8 252 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Prss37Q9DAA4 237 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Susd2Q9DBX3 820 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Irak1bp1Q9ESJ7 259 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Prss21Q9JHJ7 324 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Arid1aA2BH40 2283 aaKnown RBP12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 NcanP55066 1268 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr1362Q5SZZ8 308 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Cd52Q64389 74 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Fam222bQ6P539 562 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr924Q7TRB8 308 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Pla2g3Q8BZT7 504 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 BivmQ8CBX9 502 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr816Q8VFU2 312 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Cldn16Q925N4 235 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Fhl5Q9WTX7 284 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Defa3P28310 93 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Defa10P50708 93 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Defa15P50713 93 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 OsmP53347 263 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Klk1b21Q61759 261 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Klf17Q8CFA7 341 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Ppp1r27Q9D119 154 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Zfp111Q9R164 701 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Slc25a20Q9Z2Z6 301 aaKnown RBP12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Zfp707F6QUN2 391 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Plp1P60202 277 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 AesP63002 197 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Q497N7 227 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Ptpn18Q61152 453 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Fdx2Q9CPW2 174 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Asb5Q9D1A4 329 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Ighv4-1A0A075B5R5 116 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Gm5225J3QPL3 108 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Slc25a17O70579 307 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 OacylQ8BML2 685 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Gltpd2Q8K0R6 321 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Myct1Q8R411 188 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Trav17A0A075B655 113 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Trav12-2A0N8N6 114 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr1214A2ATG3 311 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr191L7N1Z8 309 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 P03976 113 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 ShbQ6PD21 503 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Tnfrsf19Q9JLL3 416 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 SrfQ9JM73 504 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 TicrrQ8BQ33 1889 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 PappaQ8R4K8 1624 aa12.18□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Nhsl1Q8CAF4 1587 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Gm28845A0A087WR76 214 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 P18524 117 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Ceacam1P31809 521 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 PmelQ60696 626 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Srrm4Q8BKA3 608 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Pcgf1Q8R023 259 aaKnown RBP12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Slc37a1Q8R070 531 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Pla2g2fQ9QZT4 168 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Mn1D3YWE6 1297 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Omt2bD3YX29 119 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Saa1P05366 122 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Dbx1P52950 335 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Ppp1ccP63087 323 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr93Q6UAH1 312 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Lhfpl6Q8BM86 200 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Ly96Q9JHF9 160 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Herpud1Q9JJK5 391 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Prg4Q9JM99 1054 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Slc25a10Q9QZD8 287 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Tmem238lA0A1B0GS74 79 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 EnamO55196 1274 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Ccl7Q03366 97 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Prrx2Q06348 247 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Lyplal1Q3UFF7 239 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr1181Q7TR18 311 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Tmem116A0A0G2JGD3 401 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Slc18b1D3Z5L6 459 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Adcyap1O70176 175 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 P01635 115 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 P01796 113 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 P01797 113 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 P01799 113 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Rag2P21784 527 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Tpsb2P21845 276 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Fam220aQ3ZN08 260 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Tmed6Q9CQG0 239 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 FetubQ9QXC1 388 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 S1pr3Q9Z0U9 378 aa12.17□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Igfbp3P47878 292 aa12.16□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Dnajc30P59041 219 aa12.16□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Q6PIU9 354 aa12.16□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Rgs13Q8K443 158 aa12.16□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr982Q8VGB3 321 aa12.16□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Cyb5r3Q9DCN2 301 aaKnown RBP12.16□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Mast2Q60592 1734 aa12.16□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr747E9PXH6 313 aa12.16□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Bcl2l2P70345 193 aa12.16□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Tmem230Q8CIB6 120 aa12.16□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Obp2aQ8K1H9 176 aa12.16□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr482Q8VG03 323 aa12.16□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Zfand6Q9DCH6 223 aa12.16□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms