RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 BOD1L1Q8NFC6 3051 aa6.53□□□□□ -1.36
GPC3-204ENST00000631057 MGAQ8IWI9 3026 aa6.53□□□□□ -1.36
GPC3-204ENST00000631057 CFAP47Q6ZTR5 3102 aa6.53□□□□□ -1.36
GPC3-204ENST00000631057 PSMB11A5LHX3 300 aa6.52□□□□□ -1.36
GPC3-204ENST00000631057 SLC17A3O00476 420 aa6.52□□□□□ -1.36
GPC3-204ENST00000631057 FCN3O75636 299 aa6.52□□□□□ -1.36
GPC3-204ENST00000631057 IGLV2-23P01705 113 aa6.52□□□□□ -1.36
GPC3-204ENST00000631057 PAX1P15863 534 aa6.52□□□□□ -1.36
GPC3-204ENST00000631057 GATA2P23769 480 aaPredicted RBP6.52□□□□□ -1.36
GPC3-204ENST00000631057 LOXP28300 417 aaPredicted RBP6.52□□□□□ -1.36
GPC3-204ENST00000631057 REG1BP48304 166 aa6.52□□□□□ -1.36
GPC3-204ENST00000631057 UBE2L3P68036 154 aaKnown RBP6.52□□□□□ -1.36
GPC3-204ENST00000631057 RBPJQ06330 500 aa6.52□□□□□ -1.36
GPC3-204ENST00000631057 TMEM155Q4W5P6 130 aa6.52□□□□□ -1.36
GPC3-204ENST00000631057 LYPD2Q6UXB3 125 aa6.52□□□□□ -1.36
GPC3-204ENST00000631057 MMD2Q8IY49 270 aa6.52□□□□□ -1.36
GPC3-204ENST00000631057 Q8NA96 180 aa6.52□□□□□ -1.36
GPC3-204ENST00000631057 OR1L6Q8NGR2 347 aa6.52□□□□□ -1.36
GPC3-204ENST00000631057 ST6GALNAC6Q969X2 333 aa6.52□□□□□ -1.36
GPC3-204ENST00000631057 SH3BGRL2Q9UJC5 107 aa6.52□□□□□ -1.36
GPC3-204ENST00000631057 V9GYV3 84 aa6.52□□□□□ -1.36
GPC3-204ENST00000631057 AKAP13Q12802 2813 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 TCRBV4S1A1TA0A5B7 111 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 ZNF705GA8MUZ8 300 aaPredicted RBP6.52□□□□□ -1.37
GPC3-204ENST00000631057 SHISA9B4DS77 424 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 GGTLC3B5MD39 225 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 ISLRO14498 428 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 MT-ND6P03923 174 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 CBLN1P23435 193 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 LGALS7P47929 136 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 TAS2R60P59551 318 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 PRSS8Q16651 343 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 MLANAQ16655 118 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 C10orf113Q5VZT2 155 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 ETFRF1Q6IPR1 90 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 WDR73Q6P4I2 378 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 THAP8Q8NA92 274 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 OR5AU1Q8NGC0 362 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 OR2T6Q8NHC8 308 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 CMTM2Q8TAZ6 248 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 TNFRSF14Q92956 283 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 C14orf144Q96I85 54 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 FAM167A-AS1Q96KT0 104 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 WFIKKN1Q96NZ8 548 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 SLC25A2Q9BXI2 301 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 MRPL18Q9H0U6 180 aaKnown RBP6.52□□□□□ -1.37
GPC3-204ENST00000631057 CTSZQ9UBR2 303 aa6.52□□□□□ -1.37
GPC3-204ENST00000631057 ZFHX4Q86UP3 3567 aa6.51□□□□□ -1.37
GPC3-204ENST00000631057 E7EQL1 145 aa6.51□□□□□ -1.37
GPC3-204ENST00000631057 SLC25A17O43808 307 aa6.51□□□□□ -1.37
GPC3-204ENST00000631057 IGHV1-8P0DP01 117 aa6.51□□□□□ -1.37
GPC3-204ENST00000631057 ESDP10768 282 aa6.51□□□□□ -1.37
GPC3-204ENST00000631057 CRISP2P16562 243 aa6.51□□□□□ -1.37
GPC3-204ENST00000631057 PPOXP50336 477 aa6.51□□□□□ -1.37
GPC3-204ENST00000631057 TPPP2P59282 170 aa6.51□□□□□ -1.37
GPC3-204ENST00000631057 PAFAH1B2P68402 229 aa6.51□□□□□ -1.37
GPC3-204ENST00000631057 SRSF2Q01130 221 aaKnown RBP6.51□□□□□ -1.37
GPC3-204ENST00000631057 WT1-ASQ06250 92 aa6.51□□□□□ -1.37
GPC3-204ENST00000631057 OR5I1Q13606 314 aa6.51□□□□□ -1.37
GPC3-204ENST00000631057 TEX45Q8NA69 505 aa6.51□□□□□ -1.37
GPC3-204ENST00000631057 C22orf15Q8WYQ4 148 aa6.51□□□□□ -1.37
GPC3-204ENST00000631057 IGF2BP2-AS1Q96M15 143 aa6.51□□□□□ -1.37
GPC3-204ENST00000631057 PAXXQ9BUH6 204 aa6.51□□□□□ -1.37
GPC3-204ENST00000631057 GNB1LQ9BYB4 327 aa6.51□□□□□ -1.37
GPC3-204ENST00000631057 TMEM133Q9H2Q1 129 aa6.51□□□□□ -1.37
GPC3-204ENST00000631057 CDC42EP3Q9UKI2 254 aa6.51□□□□□ -1.37
GPC3-204ENST00000631057 SPTBN2O15020 2390 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 IGHV1-69-2A0A0G2JMI3 117 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 CGB1A6NKQ9 187 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 SNURFLB1AK76 121 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 B9A039 149 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 FCN1O00602 326 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 CD3EP07766 207 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 APOBEC3AP31941 199 aaPredicted RBP6.5□□□□□ -1.37
GPC3-204ENST00000631057 IER3P46695 156 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 PRRX1P54821 245 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 UCNP55089 124 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 RAB4BP61018 213 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 RANP62826 216 aaKnown RBP6.5□□□□□ -1.37
GPC3-204ENST00000631057 CX3CL1P78423 397 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 DIAPH2-AS1Q14236 149 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 TBR1Q16650 682 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 C10orf55Q5SWW7 151 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 DMRTC2Q8IXT2 367 aaPredicted RBP6.5□□□□□ -1.37
GPC3-204ENST00000631057 OR8I2Q8N0Y5 310 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 TMEM256Q8N2U0 113 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 ZNF664Q8N3J9 261 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 STXBP6Q8NFX7 210 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 NPIPB3Q92617 1050 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 MS4A10Q96PG2 267 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 FNDC4Q9H6D8 234 aaPredicted RBP6.5□□□□□ -1.37
GPC3-204ENST00000631057 ZNF355PQ9NSJ1 428 aa6.5□□□□□ -1.37
GPC3-204ENST00000631057 PTPRQQ9UMZ3 2332 aa6.49□□□□□ -1.37
GPC3-204ENST00000631057 TPRP12270 2363 aaKnown RBP6.49□□□□□ -1.37
GPC3-204ENST00000631057 IGKV1D-37A0A075B6S9 117 aa6.49□□□□□ -1.37
GPC3-204ENST00000631057 TRAV5A0A0B4J249 113 aa6.49□□□□□ -1.37
GPC3-204ENST00000631057 A0A1W2PPI3 338 aa6.49□□□□□ -1.37
GPC3-204ENST00000631057 A8MWP6 167 aa6.49□□□□□ -1.37
GPC3-204ENST00000631057 E7EUB6 86 aa6.49□□□□□ -1.37
GPC3-204ENST00000631057 ENSAO43768 121 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms