RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 HBG2P69892 147 aa13.09□□□□□ -0.31
RTN1-209ENST00000611068 OR5D13Q8NGL4 314 aa13.09□□□□□ -0.31
RTN1-209ENST00000611068 QTRT1Q9BXR0 403 aaKnown RBP13.09□□□□□ -0.31
RTN1-209ENST00000611068 GNB1LQ9BYB4 327 aa13.09□□□□□ -0.31
RTN1-209ENST00000611068 CCL28Q9NRJ3 127 aa13.09□□□□□ -0.31
RTN1-209ENST00000611068 PPP1R3CQ9UQK1 317 aa13.09□□□□□ -0.31
RTN1-209ENST00000611068 SYNGR2O43760 224 aa13.09□□□□□ -0.31
RTN1-209ENST00000611068 MMD2Q8IY49 270 aa13.09□□□□□ -0.31
RTN1-209ENST00000611068 ZNF439Q8NDP4 499 aa13.09□□□□□ -0.31
RTN1-209ENST00000611068 PRORYQ9H606 182 aa13.09□□□□□ -0.31
RTN1-209ENST00000611068 TRAPPC2LQ9UL33 140 aa13.09□□□□□ -0.31
RTN1-209ENST00000611068 IGHV3-13P01766 116 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 SLC38A11Q08AI6 406 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 C12orf54Q6X4T0 127 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 SIGMAR1Q99720 223 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 IGSF10Q6WRI0 2623 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 PDE6DO43924 150 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 PLAUP00749 431 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 HTD2P86397 168 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 EDDM3AQ14507 147 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 TNXAQ16473 311 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 PSG3Q16557 428 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 PCSK4Q6UW60 755 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 ACP7Q6ZNF0 438 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 TMEM136Q6ZRR5 245 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 FAM216AQ8WUB2 273 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 PLPPR2Q96GM1 343 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 DCTN5Q9BTE1 182 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 OR1A1Q9P1Q5 309 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 CACNG5Q9UF02 275 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 HIVEP3Q5T1R4 2406 aa13.08□□□□□ -0.32
RTN1-209ENST00000611068 SRSF7Q16629 238 aaKnown RBP eCLIP13.07□□□□□ -0.32
RTN1-209ENST00000611068 OR8B3Q8NGG8 313 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 OR8B2Q96RD0 313 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 TACC2O95359 2948 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 SCO2A0A1W2PP80 73 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 FAM90A10PA6NDY2 464 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 FAM90A18PA6NE21 464 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 FAM90A16PA6NEW6 464 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 FAM90A20PA6NIJ5 464 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 FAM90A8PA6NJQ4 464 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 FAM90A7PA6NKC0 464 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 FAM90A22PA8MWA6 464 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 FAM90A12PA8MX19 464 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 FAM90A5PA8MXJ8 464 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 FAM90A23PA8MXZ1 464 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 FAM90A15PP0C7V4 464 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 FAM90A13PP0C7W8 464 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 FAM90A14PP0C7W9 464 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 FAM90A24PP0C7X0 464 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 LINC00869P0C866 280 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 UQCRFS1P47985 274 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 SLAQ13239 276 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 STPG3Q8N7X2 389 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 HES4Q9HCC6 221 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 ARL2-SNX15V9GYD0 113 aa13.07□□□□□ -0.32
RTN1-209ENST00000611068 ANKHD1Q8IWZ3 2542 aaKnown RBP13.07□□□□□ -0.32
RTN1-209ENST00000611068 C2orf70A6NJV1 201 aa13.06□□□□□ -0.32
RTN1-209ENST00000611068 RPS16P62249 146 aaKnown RBP13.06□□□□□ -0.32
RTN1-209ENST00000611068 UBE2G1P62253 170 aa13.06□□□□□ -0.32
RTN1-209ENST00000611068 ADORA2A-AS1P86434 159 aa13.06□□□□□ -0.32
RTN1-209ENST00000611068 TFF3Q07654 80 aa13.06□□□□□ -0.32
RTN1-209ENST00000611068 LTC4SQ16873 150 aa13.06□□□□□ -0.32
RTN1-209ENST00000611068 CD177Q8N6Q3 437 aa13.06□□□□□ -0.32
RTN1-209ENST00000611068 ASH1LQ9NR48 2969 aaKnown RBP13.06□□□□□ -0.32
RTN1-209ENST00000611068 ZNF207O43670 478 aaKnown RBP13.06□□□□□ -0.32
RTN1-209ENST00000611068 IGHV1-46P01743 117 aa13.06□□□□□ -0.32
RTN1-209ENST00000611068 PLP1P60201 277 aa13.06□□□□□ -0.32
RTN1-209ENST00000611068 ADIPOQQ15848 244 aa13.06□□□□□ -0.32
RTN1-209ENST00000611068 GCSAMLQ5JQS6 135 aa13.06□□□□□ -0.32
RTN1-209ENST00000611068 SLC25A34Q6PIV7 304 aa13.06□□□□□ -0.32
RTN1-209ENST00000611068 DUX4L9Q6RFH8 374 aaPredicted RBP13.06□□□□□ -0.32
RTN1-209ENST00000611068 ZNRF1Q8ND25 227 aa13.06□□□□□ -0.32
RTN1-209ENST00000611068 NINJ1Q92982 152 aa13.06□□□□□ -0.32
RTN1-209ENST00000611068 TRAV9-1A0A075B6T8 112 aa13.05□□□□□ -0.32
RTN1-209ENST00000611068 IGHV3-7P01780 117 aa13.05□□□□□ -0.32
RTN1-209ENST00000611068 TNFAIP6P98066 277 aaPredicted RBP13.05□□□□□ -0.32
RTN1-209ENST00000611068 ZNF146Q15072 292 aa13.05□□□□□ -0.32
RTN1-209ENST00000611068 RPEL1Q2QD12 228 aa13.05□□□□□ -0.32
RTN1-209ENST00000611068 Q8IYB0 196 aa13.05□□□□□ -0.32
RTN1-209ENST00000611068 OR51H1Q8NH63 302 aa13.05□□□□□ -0.32
RTN1-209ENST00000611068 OR1L1Q8NH94 360 aa13.05□□□□□ -0.32
RTN1-209ENST00000611068 RFESDQ8TAC1 157 aa13.05□□□□□ -0.32
RTN1-209ENST00000611068 OR4C46A6NHA9 309 aa13.05□□□□□ -0.32
RTN1-209ENST00000611068 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.05□□□□□ -0.32
RTN1-209ENST00000611068 TCL1AP56279 114 aa13.05□□□□□ -0.32
RTN1-209ENST00000611068 MEF2CQ06413 473 aaPredicted RBP13.05□□□□□ -0.32
RTN1-209ENST00000611068 GTF2H5Q6ZYL4 71 aa13.05□□□□□ -0.32
RTN1-209ENST00000611068 NPFFR1Q9GZQ6 430 aa13.05□□□□□ -0.32
RTN1-209ENST00000611068 TIMM9Q9Y5J7 89 aa13.05□□□□□ -0.32
RTN1-209ENST00000611068 TRBV9A0A0B4J1U6 114 aa13.04□□□□□ -0.32
RTN1-209ENST00000611068 M0R2Z0 102 aa13.04□□□□□ -0.32
RTN1-209ENST00000611068 PSG2P11465 335 aa13.04□□□□□ -0.32
RTN1-209ENST00000611068 GCSAMQ8N6F7 178 aa13.04□□□□□ -0.32
RTN1-209ENST00000611068 COMMD5Q9GZQ3 224 aa13.04□□□□□ -0.32
RTN1-209ENST00000611068 HRNRQ86YZ3 2850 aaPredicted RBP13.04□□□□□ -0.32
RTN1-209ENST00000611068 IGLV3-9A0A075B6K5 115 aa13.04□□□□□ -0.32
RTN1-209ENST00000611068 TRAV38-1A0A0B4J264 116 aa13.04□□□□□ -0.32
RTN1-209ENST00000611068 CLDN14O95500 239 aa13.04□□□□□ -0.32
RTN1-209ENST00000611068 SHISA2Q6UWI4 295 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms